Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------LBD16                                        ----------->HVH21                                    <---------MYB46(3)                                <---------YAB1        --------->YAB1                              --------->YAB1         --------->ICU4<---------LBD16                              <--------ATHB1         <---------ATHB12--------->LBD16   ---------->DOF2           --------->ICU4<---------ANAC46      <---------ARR14(2) ------->YAB1     ----------->HVH21<--------P  <--------P        --------->ARR14(2)                 < -----DOF2   ----------->HVH21<---------ICU4<---------MYB46(3)  --------->GLK1(1)            <------- ---DAG2 <-------TEIL        <---------ATHB12----------->GT1    <---------GLK1(1)     --------->ZAT18   ttcataaaagatgcattgacatgacatatcaatgatggtagttcgacgggtagaaatcatcaaggcaaatccgcatttgaattgaatgctcactagatta  2043100                      --------->ZAT18                      <---------ZAT18                                              ----------->GT1      <----------ID1<---------At4g35610                                       --------->YAB1 ---------REM1(2)   --------->At4g35610  <---------ANAC58                     --------->AHL20(2) --GLK1(2)     --------->WOX13(1)        <---------ANAC58------>ZmHOX2a(1)   <---------YAB1   tctacaaggagacaaaccaattagctcactagtttagttcaattcttgtctggctaatcctatctacatatacaagactataatatagcaaaattagaaa  2043200                        <-----------GT1                     --------->ARR11(3)                     --------->AHL20(1)                            ----------->GT1                     <---------ARR11(3)                           <---------YAB1                    --------->AHL20(2)                          --------->YAB1                  -----                <--------P                       ----------------->AGL1             <---------ZAT6              ----------->GT1   -------->P      ------->TEIL   <---------YAB1       ----------->GT1 <             ----------->GT1  <---------MYB111(1)<-----------------AGL1           <---------ANAC46  -   gaatatagctagaaacgggtaaatatatactacttaccaaaaactaaatgtgcctgaataggtctattatagttaatagttattcagtgtaaattatcta  2043300                   <---------AHL20(2)                                                          ------     --------->ANAC58                                                                          ------     --------->ANAC46     --------->ANAC58                                                   --------     --------->ANAC58     --------->ANAC58                                          --------------->AGL15     ================================================================================================MADS_MADS     <-----------------AGL1                                                         --------->HSFB2a(2)     ----------------->AG --------->ANAC46                                          <---------------AGL15     ----------------->AGL1                                                         <---------HSFB2a(2) ---------->AtSPL8<---------AHL20(2)          --------->SPL7       --------->ZAT6  ----------------->AGL3 -------TEIL      --------->AHL20(2)      --------------->AtSPL3 <-----------GT1   ----------------->AGL2 ------>TEIL--------->HSFB2a(2)       <------ZmHOX2a(1)        --------->AHL20(2)--------->GLK1(2)   tgtacataccccatcgggaattaaatgcaagaaacatagaggagaccgtacttcgaagttgcaaatttaacactaagttgaagaatctagaaatagaaag  2043400          <---------MYB52(1)         <----------DOF2  --------->ARR14(3)  --------->ARR14(2)                                                   <---------ALFIN1  <-----------ARR10                                                    --------->AtMYB61  <---------ARR11(3)                                                --------->AtMYB61  --------->ARR11(3)                                                ------->GAMYB  --------->GLK1(2)                        <---------ZAT14          --------->ANAC46  <---------ARR14(3)                       --------->ZAT14         --------->MYB46(3)          ------ --->ANAC58            ------------>CBF<-----------GT1        --------->YAB1    --------->AHL20(2) --->ANAC58        --------->ZAT6 <---------ICU4      --------->AtLEC2--------->MYB46(3)      <------ -->DOF2--------->TOE2(3)    ------------>CBF------->TEIL--------->LBD16        <---------AHL20(2)   ccaaaatcttcctttacttcaactctacaatttcaatcttttctctgtacttagccatccagagtcataaccaccactatattaaaatgaagacttatga  2043500         <---------WRKY12       --------->TOE2(3)       <-----------HVH21      --------->ANAC58       ---------->DOF2                                  --------->GLK1(2)      --------->ANAC58    <---------TOE2(3)                                   --------->ARR14(2)     ------->TEIL       ------>ZmHOX2a(1)                                     <---------ARR14(2) --->ATHB12    <----------DOF2                                               <---------GLK1(2) ---YAB1--------->DOF5.7(2) <------ZmHOX2a(1) <----------DOF2   <---------At4g35610              ----   tttcatgaacgtcaactctttctctcctaaggaaagacccattcgcctctttggcttcgagtttggagcttctcatgaagaatctgagtccaaagacaat  2043600                                                                       --------->HSFB2a(1)                                                                       <---------HSFB2a(1)                                                                      --------->HSFB2a(1)                                                                      <---------HSFC1(2)         ----                                                                      <---------HSFB2a(1)        <---                                                                      --------->HSFC1(2)        -----                                                                     <-----------ARR10          -----                                                                     <---------ARR14(2)        <-----                                                                     --------->ARR14(2)        <-----                                                                   --------->LBD16            -------                     ---------->DOF2                              --------->ANAC55(2)      <---------STY1(1)               --------->ANAC58               <-------TEIL        --------->HSFB2a(2)      --------->STY1(1)               --------->ANAC58              --------->CCA1(2)    <---------HSFB2a(2) --------->ANAC58             ---------->DOF2       ----------->GT1                --------->ANAC46    --------->ANAC58 ----->YAB1 --------->YAB1       ---------->DOF2                 <---------LBD16      --------->ANAC46   tacaacgagaacaatgaaagcatcaaagacgataacaaagaaaaaagattcaagtgccactattgtttccggaacttccctacttcacaagccctaggcg  2043700                                                                              ------>NtERF2                                                                             ------->GAMYB                                                              --------->At4g35610                                                              <---------ATERF1(1)----------->RAV1(1)                                                              <---------At4g35610------>NtERF2                                                              ------>NtERF2  --------->DEAR3(1)  --------->YAB1                                              <---------ZAT2 --------->DREB2C(2) -->NtERF2                                                --------->ANAC46   --------->ANAC46 ---NtERF2                    ------->GAMYB               --------->ANAC58   --------->RAP2.6(2) ->NtERF2                    --------->MYB46(3)           --------->ANAC58  --------->MYB46(3) ---->RAP2.6(2)              <---------MYB52(2)     --------->AtLEC2      <---------ALFIN1 ----RAP2.6(2)          --------->TOE2(3)      ------->GAMYB --------->DEAR3(1) --------->DEAR3(1) ----DEAR3(1)          --------->ANAC58        --------->TOE2(3)   <----------DOF2                  < -->RAP2.6(3)          --------->ANAC58       --------->MYB46(3)--------->RAP2.6(2)               <--   gccatcaaaacgctcacaagagagaacgtcaacaaactaaacgcttcaacctccattcaaacgcagccgctttcttccaccgccaacaaaaccacattgc  2043800                                                                                     ----------->RAV1(2)                                                                                     <---------At4g35610                                                    ------>NtERF2        <---------TOE1(2)                   ------>ZmHOX2a(2)             ------->GAMYB           <---------TOE2(2)                 --------->ARR14(2)             --------->MYB46(3)    <---------ANAC46            <---------TOE1(1)                   --------->ANAC46      <---------ANAC58   --------->HSFB2a(2)         ---------->DOF2--------->MYB52(1)      <---------ANAC58              < ----------DOF2 <------ZmHOX2a(1) <---------At4g35610        <---------TOE2(3)       --------->At4g35610 -------At4g35610<---------ARR14(2)         <---------ATHB12 <---------TOE1(3) <-----------GT1      -   tgcttctaggctctacgaggatcgctatagccttgaagctgttcaaatcaacgacgcgagattagggttatgtcgtatgtataactcatctgcgagtttt  2043900                                                                                        --------->ZAT2                                                                                        <---------ZAT2                                                                                        <---------At4g35610                                                                                <---------AtMYB61                                                                              --------->MYB55(2)                                                                             <---------AtMYB61                                                                             <---------DEAR3(1)                            --------->ARR11(3)                               --------->ALFIN1                            <---------ARR11(3)                              <-------GAMYB                            --------->AHL20(1)                             <---------DEAR3(2)                           --------->CCA1(2)                              <---------DREB2C(2)                          --------->ARR11(3)                              <---------DEAR4(1)                    <---------YAB1                                        <---------At1g77200                   --------->AHL20(2)                                     <---------DEAR3(1)                   <---------AHL20(2)                                  <-----------RAV1(1)--------->RAP2.6(2)                   --------->AHL20(1)   <-------TEIL                  ------->TEIL   <---------At4g35610         <-------TEIL--------->YAB1 <---------TOE1(2)             ------>MYB83<---------MYB46(3)        <---------MYB52(1)<---------ARR11(3)                      ------>MYB46(1)    --------->At4g35610  ----------->HVH21<---------AHL20(1)<---------MYB46(3)          --------->MYB52(1)XXXXXXXXXXXXXXXXXX ---------ICU4    --------->YAB1  <---------ANAC58              --------->AtMYB61<---------MYB46(3) -------->YAB1   <---------YAB1   <---------ANAC58   --------->At4g35610 --------->DDF1 --------->At4g35610   aatcgtgaccgttcatcttattataatagatatattccttggttcatcggtgatcaccagactagaccaacgtatgtcggtggtggtagcagcagccatg  2044000  Previous    Next  AGI:  At5g06650.1    Description:  GIS2 (GLABROUS INFLORESCENCE STEMS 2); nucleic acid binding / transcription factor/ zinc ion binding. similar to GIS (GLABROUS INFLORESCENCE STEMS), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G58070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68511.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23430.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 2043487    to: 2044062    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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