Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------DEAR3(2)                                           <---------MYB46(3)               --------->MYB46(3)    <---------DOF5.7(2)       ------->TEIL                 <---------WRKY45                                         -------- --------->LBD16        <-----------------------TaNAC69(2)                                  <-------- --------LBD16------>MYB83  <-----------HVH21                           --------->AtMYB61   --------- ------>MYB52(1)----------->RAV1(1) <---------WRKY12                 --------->ANAC46  <------MYB83 - ------ALFIN1----------->RAV1(1)    <---------WRKY38(1)        <---------MYB46(3)      <------MYB46(1) ---->MYB46(3)------>MYB46(1)  ---------->DOF2                --------->ALFIN1     --------->ZAT2 ---   caccggatgaatcaccaacaacaaaaaccctgtcaaagtcaacgtctgttccatcttcaaaccagtggttcacaccatcggaaacagcttggtcccagag  2010600                                           --------->ALFIN1                                          <------NtERF2            <---------ZAT2                                        <---------DEAR3(1)         --------->ZAT2          --------->ABI4(1)            <------NtERF2               <---------At4g35610          ------>NtERF2              <---------DEAR3(1)            <---------O2         --------->DREB2C(2)      --------->LBD16                  <---------ANAC55(2)         --------->DEAR3(1)     <---------LBD16                    =========================MYC_MYB         <---------ALFIN1      <---------At4g35610                 --------->O2        --------->ORA47(2)     --------->ZAT2                      --------->TGA1a     --------->MYB46(3)        <------NtERF2<---------SPL7         <---------TGA1a     <---------ABI4(2)         --------->At4g35610                 ============================bZIP_DOF    --------->ANAC58  ------>ZmHOX2a(1)--------->ATERF1(1)       <-----------RAV1(2)    --------->ANAC58 --------->TOE2(3)<---------ATERF1(1)   <---------MYB52(1)      <----------DOF2 ->LBD16--------->DEAR4(2)     <---------ZAT2       --------->At4g35610   --------->ANAC58 -HSFB2a(2)       --------->ARR14(2) --------->ALFIN1   -------->P --------->At4g35610 >HSFB2a(2)     --------->At4g35610<------NtERF2    <---------At4g35610   <----------ID1 -------->AtLEC2<---------At4g35610<---------MYB52(1)  --------->MYB52(1) --------->ANAC58 ------------------>WRI1---------->DOF2<---------ABI4(1)=====================MYC_MYB<-------GAMYB   ccatgtaagcaccgcctcagcatcctcaaaggcagccgggaggcggtgttcgggtgctaaccggtagtcaggtgagacgacaagggcgttaagggacgat  2010700                                                               --------->ALFIN1                                                              --------->LBD16                                                             --------->DEAR3(1)                                                             <---------ANAC46                                                            <------NtERF2                                                           ------>NtERF2                                                          --------->DEAR3(1)                                                          --------->ANAC46                                                          <---------ALFIN1                                                         --------->MYB46(3)                                                         <------NtERF2                                                         --------->ATERF1(1)                                                         --------->RAP2.3(1)                        <                                                      --------->ATERF1(1)                         <--                                                    --------->ANAC58                              <--                                                    --------->ANAC58                      <---------SPL7                                                  --------->At4g35610                   <------------                                               --------->At4g35610          --------->bZIP60(2)  <---                                      ----------->HVH21 <---------ATERF1(1) --------->ANAC46     ----                            ------>NtERF2    <xxxxxxxxxxxxxxxxsmallRNA(s)   --------->ANAC58    <----                        --------->ALFIN1    --------->LBD16--------->LBD16  ----------->HVH21  <-----                    ---------->DOF2 <---------ANAC55(2)--------->DEAR3(1)   --------->ANAC58---------   gcaagagttagacagaagttgtgaaagtgaggccaagaacgtgacccgaagcagaagcccccgccgtggaagaagaccacgacagggagagcggtacggt  2010800     <------NtERF2                       <------MYB46(1)    --------->LBD16                      <------MYB83   <---------ANAC46                     --------->MYB59  --------->ATERF1(1)                 <---------MYB52(1)  <------NtERF2                      <-------GAMYB                               <---------MYB46(3)  <---------LBD16                   <---------MYB46(3)                         <---------ANAC58 ---------DEAR3(1)                  --------->MYB111(2)                        <---------ANAC58 ----MYB83                       ------------>MYB.PH3(2)                       <-------GAMYB ----MYB46(1)                   <---------TOE2(3)                             <------MYB46(1) ---AtSPL3                      <---------TOE1(3)                             <------MYB83 ------MYB46(3)              <---------REM1(1)                                <---------MYB46(3) ----->MYB55(2)              --------->ALFIN1                                --------->MYB59 ----P<---------ARR14(2)     ----------->HVH21    <---------WOX13(1)       <---------MYB52(1) --GAMYB             <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------->MYB52(1)          <-- >SPL7--------->ARR14(2)  <---------DEAR3(1)   <---------YAB1<----------DOF2 <---------AtMYB61    <--   tggaggcggaaatgggtttgtagagacggaggtgaaggttgttaggtttgtgatagattgagtctttgaagagaacggtttggttgtttttgaatgggat  2010900              <---------WRKY12              <---------WRKY38(1)             --------->WRKY18(1)          <---------TOE2(3)      --------->MYB52(1)          --------->MYB59   ------>ZmHOX2a(2)         <---------ICU4     ==============================HOX2a_HOX2a   <---------ANAC46        ===============================HOX2a_HOX2a   <------MYB83            <------ZmHOX2a(2)   <------MYB46(1)         --------->GLK1(1)       <------ZmHOX2a(1)                      --------->ARR14(2)   ----------->GT1        --------->ARR14(2)  <---------ANAC58                            <---------ARR14(2)  --------->MYB59         <---------AGP1      <---------ANAC46                     <---------ANAC46  <---------MYB46(3)      <---------ARR14(2)  <---------ANAC58                 <---------At4g35610 ---------RAV1(1)        <---------CCA1(2) <---------MYB52(1)       --------->AtLEC2    <---------MYB46(3) -------MYB46(3)      <---------LBD16     <-------GAMYB<---------REM1(1)    <---------At4g35610    --   ttgttgggtaataaggtcaatgctctcggatctcaaaacggtaccgttgcttaggagttgaagcaaacccatgcagtcttctgctacttgtggttcttct  2011000                                                                   <---------AHL20(1)                                                                  <-----------TBP                                                                  --------->AHL20(2)                                                       --------->TGA1a                                                       --------->O2--------->ARR11(3)                                                       --------->ANAC55(2)                                                       <---------ANAC55(2)                                                       <---------TGA1a                                                       <---------O2--------->AHL20(1)   --------->MYB52(1)                                                       --------->At4g35610             ---------->DOF2                                                       <---------At4g35610       --------->ANAC58                         <----------DOF2     ------->TEIL----------->HVH21       ----------->GT1            --------->TOE2(3)             *TSS     <-----------HVH21             --------->ANAC58  ----------->HVH21      ========================================bZIP_DOF  --------->ALFIN1     <---- ---->ZmHOX2a(1)        <---------DAG2<---------GLK1(1)===========================================bZIP_DOF   cctagtgaccccattcttagtctctcccttttggttttggatatatgtatcagtgtcatgtgacataaatatatagaggggggaagtaacaaagggtact  2011100                                                                  <---------YAB1                                                          <---------ALFIN1                                                         --------->DEAR3(1)                  --------                                                        --------->DEAR3(2)     <---------At4g35610                                                        --------->ATERF1(1)    --------->At4g35610<--                                                       --------->At4g35610    <---------RAP2.3(1) <--                                    --------->TOE2(3)  --------->PCF2        <---------RAP2.3(2)  <--                          ----------->GT1              <---------ATERF1(1)   <---------RAP2.6(2)  <--                        <------------CBF     <----------DOF2      <---------AHL20(2)         --------                      --------->ARR11(3)  --------->ARR11(3) <-------MYC3    <---------ANAC58<-------                      <---------ARR11(3)  --------->GLK1(2)<---------TOE1(2) <---------ANAC58--------              <------NtERF2     <---------AHL20(2)     <---------At4g35610   <---------RRTF1(2)------ ------DOF2 <---------LBD16 <---------YAB1<---------ARR11(3) ------->MYC3   <---------LBD16  <-------   ttggtcatttcaagtcgggagatagatattgtaataaatctcaaaatcttttgagggagcccacgtttttaattgttttgcggctgattcgtctcatgtg  2011200                                                                                     --------->ANAC55(2)                                                                                     <---------ANAC55(2)                                                                                    <-------TEIL                                                                                  <---------ARR14(2)                                                                            <----------DOF2       <--                                                                       <------MYB83--------->CCA1(2)                                                                       <---------DEAR3(2)   ---------                                                                       <------MYB46(1)      =========                                                                      <---------DEAR3(1)    <-------- ->O2                                                  --------->CCA1(2)    ========================= -------bZIP60(2)                                     <---------ARR14(2)   <---------ANAC58 --------- -------ANAC58                                        --------->ARR11(1)   <---------ANAC46 ========= -------ANAC58                                        --------->ARR11(3)   <---------ANAC58 --------- -------ANAC46                                      ----------->ARR10 <---------MYB46(3)    --------- ->TGA1a                                        ------->TEIL          <---------DREB2C(2)   --------- --O2--------->KAN4(2)                        <-------TEIL            <---------DEAR4(1)    <-------- ->ANAC55(2) <---------ETT(2)              --------->At4g35610 <---------At4g35610--------->ARR14(2) ----->HVH21 --------->ETT(2)              <---------At4g35610 --------->At4g35610<---------ARR11(3) --TGA1a  ------>ZmHOX2a(1)            --------->MYB52(1) ----------->GT1 <---------MYB46(3)---------   acttggtcattcctatcgacctcttatgggtttgtcaaaactagcagatgcacttagatatggtcatatgagtcggtgcttgaagatacataacacgtcc  2011300  <----------DOF2 -------CCA1(2) >O2  --------->TOE2(3) ============bZIP_DOF -ANAC55(2) =bZIP_DOF                                                 <---------MYB52(1) >ANAC46                                               --------->At4g35610 ============bZIP_DOF           --------->MYB52(1)     <---------At4g35610 >ANAC58               ------>ZmHOX2a(1)             <-----------RAV1(2)      <----------DOF2 >TGA1a               --------->TOE2(3)       <---------ANAC46                <---------DAG2 >ANAC58           --------->ARR14(2)         <---------ANAC58          ----------->GT1 -TGA1a------>ZmHOX2a(1)  ---------->DOF2     <---------ANAC58       ---------->DOF2              --- >bZIP60(2)  <-----------GT1    <---------DOF5.7(2) <---------At4g35610<---------TOE2(3) <-----------GT1   ctatctttccttatattaccacatcctcaaaagtaaacggatgcaattgcttgcatcagctgttttgtacttaaaggtaacttttcggttttaacaaaac  2011400                                             ----------->RAV1(1)                                            --------->ANAC46                                          --------->ANAC58 --------->DOF5.7(2)                            ----------->RAV1(1)          ----------->GT1                    --------->MYB52(1)    --------->ANAC46--------->TOE1(3) --------->ANAC46                ------>NtERF2             --------->ANAC58--------->TOE2(3) --------->ANAC58        < ------->DOF2  <----------ID1    <---------ZAT6   <-------TEIL              --------->ANAC58 <-------TEIL   aaaagagaaacagtatgaggccaaacgatacaacagtgttacacacacaacatacagaaacgttaaacgaagaaacacaagcaattttagaaacatacat  2011500  Previous    Next  AGI:  At5g06570.1    Description:  hydrolase. similar to ATCXE17 (ARABIDOPSIS THALIANA CARBOXYESTERASE 17), hydrolase [Arabidopsis thaliana] (TAIR:AT5G16080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65352.1); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) Range:  from: 2007991    to: 2011042    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g06580.1    Description:  FAD linked oxidase family protein. similar to FAD linked oxidase family protein [Arabidopsis thaliana] (TAIR:AT4G36400.2); similar to FAD linked oxidase family protein [Arabidopsis thaliana] (TAIR:AT4G36400.1); similar to hypothetical protein OsJ_022269 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38786.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39881.1); similar to unknown [Picea sitchensis] (GB:ABK24997.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain FAD-linked oxidase-like, C-terminal; (Inte Range:  from: 2011289    to: 2016540    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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