Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <------NtERF2                                                                            --------->ATERF1(1)                                                                           <---------ATERF1(1)                                                                           <-----------HVH21                                                                          --------->DEAR3(1)                                                                          --------->RAP2.3(2)                                                                         --------->DEAR3(2)                                                                  <---------At4g35610                                                                  --------->ZAT2 --------->ANAC58                            <----------DOF2                       --------->At4g35610--------->ANAC58   --------->LBD16       ------>NtERF2                            <---------ZAT2 --------->ANAC58  --------->LBD16        --------->LBD16                     --------->MYB46(3) <---------TOE1(2)  --------->ANAC46     <---------LBD16                     --------->MYB52(1)  <-----------RAV1(2) --------->LBD16     ------->GAMYB   ------>ZmHOX2a(1)  ------>ZmHOX2a(1)--------->ATERF1(1) <---------LBD16   ------->TEIL --------->GLK1(1)    ------>ZmHOX2a(1)   --------->RAP2.3(1) --------->HSFB2a(2) --------->AtMYB61      <---------HSFB2a(1)   ----------->RAV1(2)--------->ANAC46 <---------HSFB2a(2)--------->MYB46(3)      --------->HSFB2a(1)  <---------MYB46(3)  --------->ANAC58 --->ZmHOX2a(1)    -------->P --------->ATHB12      <---------ALFIN1     <------NtERF2        <------ ---ALFIN1      <---------ATHB12<---------GLK1(1) ------>ZmHOX2a(1)     <---------At4g35610   <------   ctccccggagacatccccatcaacctccggcttgatttcctcgacaacgttcctcctcctccaacggctgctggagccgtcgcaggcacaccattagcgt  1994500                 <---------DAG2             ----------->HVH21           --------->At4g35610           <---------O2        <---------MYB52(1)       <-----------HVH21      <---------O2                ------->GAMYB      <---------TGA1a     --------->At4g35610      <---------ANAC58    <---------At4g35610      <---------ANAC46    --------->ZAT2        --------->At4g35610                     <---------ANAC58      <---------ANAC58    <---------ZAT2        --------->ZAT2                    --------->DAG2      ====================================MYC_MYB                               ---------->DOF2     <------NtERF2       <-----------RAV1(1) <---------At4g35610       <---------LBD16 <------NtERF2 ---ANAC58 <---------At4g35610   <------------AtMYB77   ------>ZmHOX2a(2)  --------->SPL7        ---- ---ANAC58 <---------bZIP60(2)   --------->MYB46(3)    <------ZmHOX2a(2) --------->LBD16<---------ANAC58   ccatggagccgtgaggtgaccttatgtctgctgcaaccgtctcatatagctgctccgatcgtgttcgagctaaaccggaggccaaaggtggcttctccat  1994600                                                                               <------ZmHOX2a(2)                                                                       --------->TOE1(2)                                       <---------ARR11(3)            <-------TEIL                                       --------->GLK1(2)          --------->CCA1(2)                                   --------->YAB1                <---------AHL20(1)          <----------DOF2       --------->YAB1                   <---------ARR11(3)         <---------DAG2     --------->AtMYB61               --------->MYB46(3)--------->ARR11(3)       ---------->ID1   <---------ETT(2)              --------->AHL20(2)      <---------ARR11(3)      <-----------GT1   --------->ETT(2) <---------ICU4   <-----------GT1  --------->HSFB2a(2) ------->HVH21          --------->WRKY38(1)           <---------AHL20(2)   <---------HSFB2a(2)      -   tgacattttgaccttttcaaaaactgtcgaccaaaaatcataatctttagccaaaatttataaccaatatatacgttcgagatcatatatagaacttata  1994700                                                                                                  ---                                                                                                 ----                                                                                              <------      <---------ARR14(2)                     ----------->GT1         --------->YAB1           <------    ------->TEIL                           ---------->DOF2    --------->ICU4                  <------ ------>TEIL                       --------->AHL20(2)      <------ZmHOX2a(1)      <---------YAB1<----   tgtatgtatatatggaacataaacaaatgaacagacataaaatagaaaagaaaaaaaaacaggaatgactataagaagatgggtatgattttttcttagg  1994800 ------>CCA1(2) ----->ARR11(3)                                                                      ---------->DOF2 ---TOE2(3)                       --------->DAG2                            --------->CCA1(2) ---TOE1(2)              ---------->DOF2 >>>>>>>>>>>>>>>>>LFY        --------->HSFB2a(2) ---TOE2(2)     <---------LBD16  ---------->DOF2                     <---------HSFB2a(2)            - --ZmHOX2a(1)<----------DOF2----------->GT1         ---------->DOF2  <---------TOE2(3)             <-   atatagaatcgatacctttggggaactaaaagataaaaagtgtttccactgtttgaaagaggtttgtttttatggaagagacgatgttaaagcttgaaac  1994900                                 --------------->AGL15                                 <---------------AGL15                             ------>ZmHOX2a(1)                                 <----------DOF2                                  --------->TOE2(3)               <---------At4g35610 --------->AHL20(2)                          <-----------GT1               --------->At4g35610 <-----------TBP   <---------ANAC58          <---------ARR11(3)               <---------ZAT2   <-----------------AGL3                         --------->ARR11(3)             *TSS               ----------------->AGL3                      --------->YAB1        <----------DOF2    -------->P                <---------ANAC58    --------->YAB1--------->YAB1   <---------ALFIN1        ------->TEIL            <---------YAB1        --------->TOE2(3)    <------ ---------->HVH21     --------->REM1(1)          --------->YAB1         <---------YAB1<---------YAB1 ----------HVH21  --------->At4g35610           --------->ICU4         <---------TOE2(3)      <------   ttgtgacaccctttctaagctgcttcatcaaccttctttatatagtagcatttatgagtgcctcaactccatttacgataatatccttatgatcaacttt  1995000                          --------->AHL20(2)                          <---------AHL20(2)                        --------->AHL20(2)                      --------->AHL20(2)                     <---------AHL20(1)                     --------->AHL20(1)                  --------->AHL20(2)           --------->ATHB12                  --------->YAB1               <---------ICU4                 <---------YAB1                --------->YAB1                --------->AHL20(2)             -------->ATHB1                <---------AHL20(1)            <---------ATHB12                <---------AHL20(2)  <---------AHL20(2)                      ------>MYB46(1)                --------->AHL20(1)<---------AHL20(2)          --------->ARR14(2)               --------->YAB1  <---------AHL20(1)             <---------ARR14(2)              <---------YAB1<---------AHL20(2)--------->ICU4  --------->ARR11(3)                   <-              <---------AHL20(2)<---------AHL20(2)            <-----------ARR10                   <--           <---------AHL20(1)  --------->AHL20(1)             <---------ARR11(1)                  <--           --------->AHL20(1) <---------AHL20(2)   --------->ATHB12         ------>MYB83  <---------- ----DOF2 <---------AHL20(2)--------->AHL20(2)<---------YAB1  <---------ARR11(3)     <-----------GT1< ---DAG2<-----------TBP <---------AHL20(2) <---------AHL20(2)<---------CCA1(2)--------->YAB1<--------   tcatacatctatatatattataatatatatatatatattttttttttaatcattgattagttcatatcttcttatacctagcacaatttacattaccatt  1995100   <---------TOE2(3)   <---------TOE1(3)  <---------DOF5.7(2) --------->WRKY12 ----------->TGA1 ------GAMYB                                                                                        < ----MYB83                      --------->AHL20(2)                                                 <- ----MYB46(1)            --------->YAB1                                                            <- -GT1     <------ZmHOX2a(1)<---------YAB1                                                   --------- ---------WOX13(1)       <---------ICU4                                                     --------- -YAB1<---------MYB52(1)--------->ICU4  --------->At5g28300                               --------->AHL20(2)   tggttgacgttaggagtttattctgaattatgaataaaacaccgtaatcgaattgaaactgtttgcacttaattcaaattagaaattgacaaaataatat  1995200 -------GAMYB                  <---------AtLEC2                                <---------ZAT6 -----MYB83              <------MYB46(1)                                    --------->ATHB12 -----MYB46(1)           <------MYB83                              --------->ZAT14           <------- >YAB1               <---------STY1(2)            ------>ZmHOX2a(2)<---------ZAT14         <---------MYB46(3) >AHL20(2)      <---------TOE2(3)     ----------->GT1              --------->ZAT18<---------WOX13(1)   ttggttgaatattggtttgagatagctaggtttgcattgagagtaaaactgatctcaatacttgaattgtgtactgaatgagtgatagattagtggttag  1995300                                                                                                 ====                                                                                                 ====                                                                                                 ----                                                                                                <----                                                                                                =====                                                                                                =====                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                --------->ZAT14                                                               <------ZmHOX2a(1)              --------->ANAC46                                                      =================       <------MYB46(1)                                                              <------ZmHOX2a(2)       <------MYB83                                                                 =================HOX2a_HOX2a       ----------->GT1                                                             --------->ARR11(3)       <---------MYB46(3)                                                          <---------ARR11(3)     <---------WOX13(1)                                  <----------DOF2          ------->GAMYB------  <---------YAB1<---------ZAT14--------->ZAT6        <---------ZAT18         <---------YAB1 <-------- -P--------->ATHB12          <-----------GT1    --------->ARR11(3)        <---------YAB1    <--------   cattttgattggttacactgtacatttagtttaacactcttgtattagatgattttgcactttgttttgtttgaatattatcaacgatctagttaaggat  1995400  Previous    Next  AGI:  At5g06530.1    Description:  ABC transporter family protein. Identical to White-brown complex homolog protein 23 (WBC23) [Arabidopsis Thaliana] (GB:Q93YS4;GB:Q94EX0;GB:Q9FG17); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G52310.1); similar to Putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:AAM51832.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39895.1); similar to hypothetical protein OsI_009842 [Oryza sativa (indica cultivar-group)] (GB:EAY88609.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains Inte Range:  from: 1989748    to: 1994913    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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