Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->YAB1                  ---------->DOF2                                               <---------ATHB12                ----------->HVH21                                              ------>MYB83              <---------At4g35610                                              ------>MYB46(1)              --------->At4g35610                                             --------->WOX13(1)           <-------TEIL                                                     --------->MYB46(3)        <---------DEAR3(2)                                                 --------->ANAC58       <---------DREB2C(2)                            <---------DAG2       --------->ANAC58      --------->DDF1                                  <----------DOF2     --------->WOX13(1)    <-----------RAV1(1)       <------------------------ANAC81    <---------GLK1(2)              -----   cttattatgtcggtccatctgaaaggagtttttttttttttttttttgtgtttcaacttttttctcagaatgttgtcaaccaatcagagtattcaaacgg  1984600                          --------->AHL20(2)                      --------->AHL20(2)                          <---------AHL20(2)                      <---------AHL20(2)                          <---------AHL20(1)              --------->ANAC58             --------->MYB52(1)--------->ATHB12           --------->ANAC46          --------->YAB1  --------->ARR11(3)              --------->ANAC58      <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ANAC46         --------->AHL20(1)         --------->ZAT14         <----------ID1 --------->ANAC58         <---------ARR11(3) --------->HSFC1(2)  --------->AHL20(2) --------->ANAC58        --------->AHL20(2)  <---------HSFC1(2)  <---------AHL20(2)                 - ---->At5g28300   ----------->GT1      ---------->DOF2  --------->ZAT6--------->YAB1            <----   tagaagccatactcataacagagtaaaatatattgtttggctaaagaaacatcggtgaacactcaaatttaatcagaagggaacaaaaaacaaacttgac  1984700                                                                                              -------                                                                                          --------->ANAC58                                                                <---------ANAC58          --------->ANAC58                                      --------->ICU4            <---------ANAC46          --------->ANAC46                        --------->ANAC55(2)                     <---------ANAC58        --------->MYB52(1)                        <---------ANAC58                       <---------ZAT2       --------->ANAC58                        <---------ANAC55(2)                    <---------At4g35610  --------->ANAC58                        <---------ANAC58        <---------bZIP60(2)               ---------->DOF2                     <---------MYB52(1)  <---------YAB1 <---------ICU4          <-----------HVH21                   ----------->GT1    <---------YAB1    --------->ATHB12       --------->ANAC58    --------------->AtSPL3         <---------YAB1      <---------YAB1          --------->ANAC58    -- --------->DOF2    <---------ZAT6<---------At4g35610   <------ZmHOX2a(2)       --------->bZIP60(2)<-- ------ID1   <---------------AtSPL3--------->ICU4 --------->ALFIN1             --------->ANAC46 <----   gacaaagcagtactagtagtactgttacttgatggagatgattatgaatgaagtgggatcattgcagcttgtggagagagcacgtcaagccaacgctaca  1984800                                                                              <---------YAB1                                                                            --------->YAB1                                                                           <---------YAB1            <--------ATHB1                ------>MYB83                    --------->AHL20(1)            <---------ICU4                ------>MYB46(1)                 --------->AHL20(2)            --------->YAB1           <-----------GT1                     <---------ICU4           <---------ATHB12        <-----------HVH21                    --------->ICU4 -->ZAT14  --------->ICU4     <---------AHL20(2)                      <---------ICU4 ------->ZAT14           <---------AHL20(2)        ---------->DOF2    <---------AHL20(2) -------MYB52(1)       <----------DOF2  <---------MYB111(1)          --------->AHL20(2) -----ZAT6 <---------ATHB51 <---------YAB1-------->P                 <---------ATHB12               -   gttaactagagcaataattctgtctcttttatttttatgtcacctactactactaaagaaaacattttctaataaatattataaaacaaaaaatactcgc  1984900                                                                                               <-----                                                                                         <----------DOF2                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      <---------ARR14(2)                                                                                      <---------ARR11(1)                                                                                      <---------ARR11(3)                         ------->TEIL                                                 --------->ARR11(3)                      <---------REM1(1)                                               --------->ARR14(2)                   <---------MYB46(3)                                                 <---------AGP1                  <--------P                                                          <-----------ARR10                  <---------WOX13(1)                                                 <---------CCA1(2)                <------MYB46(1)                                                      <---------ARR14(1)                <---------MYB46(3)                                                  --------->LBD16              <---------WOX13(1)                               <----------DOF2    <---------LBD16             <------------CBF                              <---------CCA1(2)      <---------At4g35610            <---------MYB46(3)                      --------->ZAT14       ------>ZmHOX2a(1) *TSS            --------->ATHB12   <-----------RAV1(1)  --------->ZAT18       =====================HOX2a_HOX2a --------->DOF2 <------MYB83 <------------CBF       <---------ZAT18       ====================HOX2a_HOX2a   atgaaagttgaaggtgattggttgatgaagctattgttgtttccattacacttgttcactcatctctttctctctccttctctctgcggatctttgtttc  1985000               <---------At4g35610               --------->At4g35610         ----------->RAV1(1)        --------->DREB2C(2)        ----------->HVH21               <---------GLK1(2)        --------->DEAR3(1)            --------->ANAC58       --------->DEAR3(2)             --------->ANAC58                                 --------->ANAC46       --------->MYB46(3)      <---------GLK1(2)                                     <-----------GT1 ------------AGL1             <------ZmHOX2a(1)                                    <----------DOF2<--   taatttggaaccgacatagctcccaactaataggaatctcaagcttctcactctctcttgtgtaagtttcttctacttatgttttctttactccattttg  1985100                                         ------>ZmHOX2a(2)                                       --------->ARR11(3)                                       <---------AGP1                                       <---------ARR11(3)                                       <-----------ARR10                                       <---------ARR14(2)                   <---------TOE2(3)                            --------->ARR14(2)                             <-----------GT1                            <---------ARR14(2)                        <---------ANAC58                      ------>ZmHOX2a(1)--------->ARR14(2)             <---------ANAC58           <---------YAB1   --------->GLK1(2)                         <---------ANAC46              <          <----------DOF2   <---------ARR11(3)                  <---------TOE2(3)                 <--   <<<<<<<<<TBF1      ==========================HOX2a_HOX2a --------->TOE2(3)                     --- -------GLK1(2)   <---------ZAT18     <---------CCA1(2)  <-----------GT1  ----------->HVH21<---------   gattcttcttctctttattgtgtcctcgagtatctattgtggatcttgtctagcatttttcacattaatgtttcgtttgacgatttgatttttgggtcta  1985200                                                                                    <----------DOF2                                                        <---------ZAT18            <---------ANAC58                                                        --------->ZAT14        <----------DOF2 --------->YAB1                     <XXXXXXXXXXXXXXXXXXXXMIR866-5P         <---------ZAT18 ---------YAB1                  <----------ID1    <---------WRKY18(1)   <---------ANAC58 --------DOF2      <-----------GT1  ---------->DOF2     <---------ZAT14 <---------ANAC58 ------------------>WRI1  <----------DOF2      <---------ANAC58         <---------ANAC46      ------- ---------------ANAC81<----------DOF2          <---------ANAC58        <-------TEIL<---------ANAC58   cttttatagtttctcccaaattttctttctttagacaacaaagtctgtttcttgactgtgaacttgagatgggttcgtgtgctttgcttttaaaactaaa  1985300                                                                                      <---------RVE1(1)                                                                                      <---------CCA1(1)                                                                                     --------->ARR11(3)                                                             <----------DOF2         <---------ARR11(3)             <---------ANAC58        --------->MYB52(1)      <---------DAG2     ----------->RAV1(1)             <---------ANAC58 --------->ANAC46        <---------MYB46(3) <---------ANAC58 --->DOF2<----------DOF2    <-----------GT1    <----------DOF2           <---------ANAC58  <---------   gtctaaaaattctttccttgttaagagtttttacacaactaagagaagtcttttagttgttgacttttttttttagcttgttcaacagatattttgtggc  1985400                                                                ----------->RAV1(1)                                                                <---------ALFIN1                                                                --------->AtMYB61                                                               --------->MYB46(3)                                                              ----------->RAV1(1)                                                              ------>NtERF2                                                             --------->ANAC46                                                             <---------ALFIN1                                                             --------->DEAR3(1)                     <                                                            --------->ATERF1(1)                   <--                                                            <------NtERF2                     ------>ZmHOX2a(2)                                     --------->AtLEC2      <---------ATERF1(1)               <-------                                --------->ANAC58           ------>NtERF2                    <--------                                --------->ANAC58          --------->ETT(2)                  ---------                       --------->HSFB2a(2)               ---------->ID1                     <--------                       <---------HSFB2a(2)             <-----------RAV1(1)                  <-------- <----------DOF2    <----------DOF2--------->CCA1(2)<----------DOF2                        <---------CCA1(2) --RAV1(1)   --------------------->WRI1         <------ZmHOX2a(1)                     <----------DOF2   tctctttcagttttccattggacttttggaacataagctatgcaaactgaggagcttttgtcgccaccacagactccttggtggaatgcttttggatctc  1985500  Previous    Next  AGI:  At5g06510.1    Description:  CCAAT-binding transcription factor (CBF-B/NF-YA) family protein. Identical to Nuclear transcription factor Y subunit A-10 (NFYA10) [Arabidopsis Thaliana] (GB:Q8LFU0;GB:Q9FG19); similar to ATHAP2B/HAP2B/UNE8 (HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B), transcription factor [Arabidopsis thaliana] (TAIR:AT3G05690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67027.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) Range:  from: 1984992    to: 1987045    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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