Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ALFIN1          --------->AtMYB61           <---------------------WRI1       <------ZmHOX2a(1)        ------>ZmHOX2a(2)       ================================HOX2a_HOX2a   ---------->DOF2            <---------ARR11(3) -----ANAC58                  --------->ARR11(3)                    <----------DOF2 -----ANAC58                 --------->YAB1             <---------ZAT6                             -- -----ANAC46<---------ALFIN1<---------ATHB12     ---------->DOF2    <---------DAG2            <------   gtgaagaaaggaccacacattgaataaacaatgatctagcatcgaattgatcaaagtagaggtaaacaaactttttttttagttttggctacaaatacca  1968800                                                                     <----------DOF2            <----                               <----------DOF2          ---------->DOF2          --------->ARR11(3)                        --------->YAB1                --------->ANAC58           <---------ARR11(3) ------->YAB1     <---------TOE1(2)         ---------->DOF2          <---------DAG2             ----- ---YAB1         >>>>>>>ZML2<---------ARR11(3)        --------->ANAC58          <---------CCA1(2)<---   ttgatcactccccctagttctaggtttcatgacctttctgtgcatcaaaagataacaagaaagaagcgaaactttttgttctatatctcttagactaatt  1968900                                                                    --------->AHL20(2)                                                                 ----------->GT1                                                             --------->LBD16                                                           ------>ZmHOX2a(2)           <------------- --------->MYB52(1)                                       <------ZmHOX2a(2)           ----------->RAV1(2) -----AHL20(2)                     --------->ARR11(3)    --------->ARR14(2)           --------->At4g35610 ---->AHL20(2)                --------->TOE2(3)          <---------ARR14(2)           <---------At4g35610 --------GT1                  --------->YAB1          <------ZmHOX2a(2)             --------->YAB1  -   aactaatggagaaacaaaaacatttgattctatcttagttcttgtaacccaaaacgatcgatccgagagataaaatcccctaactatcatctgaaattgg  1969000                                                                                  <--------P                                                                              --------->SPL7                                                                            <---------SPL7                                                               --------->TOE2(3)  <---------MYB52(1)                                                               --------->TOE1(3) <-----------HVH21                                                        <------ZmHOX2a(1)  <---------ANAC58  <---------YAB1                                       <----------ID1      <---------ANAC58 ----AGL3                                            <------ZmHOX2a(1)   <---------ANAC58 ------>ZmHOX2a(2) -------->YAB1        ---------->DOF2       ----------->GT1  ------->TEIL<---------ANAC58 ===========   aatcatactagtcaaattcaacttaaaagagacattaactgatgagaagttaagaggaggacgaaccttgaaatttcgcgtccggttagggatcgtagta  1969100                         <---------HSFB2a(2)                                                    <----                         --------->HSFB2a(2)                                                    <----                       <---------At4g35610                          <---------ANAC55(2)    --------->ZAT2                       --------->ZAT2                      >>>>>>>>>TBF1                   <---------ZAT2                       <---------ZAT2            --------->LBD16    --------->ANAC55(2)    --------->At4g35610         <---------ARR14(2)                      ------>NtERF2      --------->ANAC58       <---------At4g35610         --------->ARR14(2)                     --------->ANAC46    --------->ANAC46    ------>ZmHOX2a(1)   <------ZmHOX2a(1)   --------->At4g35610     <---------LBD16      --------->ANAC58   --------->TOE2(3) =========HOX2a_HOX2a <-----------RAV1(1)  --------->ARR14(2)  <---------GLK1(1)   --------->GLK1(1)   agcgaggaacagttcttctggtttctgctggaagagagaagactaaatccccgcgagggaagaagaaatcacgaaatggagacacatttcctcagcttgc  1969200                                    --------->LBD16                                  <---------LBD16           --------->TOE2(3)    <---------ARR14(2)      --------->AtMYB61         --------->ARR14(2)     <---------ATHB12           ------>MYB83     --------->MYB46(3)         ------>MYB46(1)    ------>MYB83               --------->WOX13(1)    -------->P            ----------->HVH21    ------>MYB46(1)     *TSS ------------>CBF  ------->GAMYB         --------->ZAT2                                  <---------ANAC58            - --------->MYB46(3)     <---------At4g35610                  <---------YAB1   <----------DOF2    ---- -----ANAC58            --------->At4g35610 ------->GAMYB <----------DOF2     <---------DAG2    <---- -----ANAC58<---------MYB52(1)--------->AtMYB61  --------->GLK1(2)      <---------ANAC58        <----   ttaaccaaccatacgttagtaatttaagctgaccaatccggttcaaccgaaattctatgtcttttgaatgtttttcttgacttttttttttaaggggtcc  1969300                                      <---------AHL20(2)                   ------------>CBF  --------->AHL20(2)                                             <                  ------->GAMYB      --------->AHL20(1)                                             <                 --------->ANAC58    <---------AHL20(2)                                             <                 --------->ANAC58    <---------AHL20(1)                                           <--           <-----------GT1 --------->ANAC58                              --------->At5g28300  <------    <---------ATHB12       --------->ANAC46                              --------->LBD16 --------->ANAC58  --------->WOX13(1)       --------->ANAC58                             ----------->GT1  --------->ANAC58 ----------->CBF --------->ANAC46   --------->YAB1                      ------->GAMYB   --------->WOX13(1) -->ZmHOX2a(1)  ------>MYB46(1)--------->ANAC46                 --------->YAB1       <-----------HVH21 -----ANAC58    ------>MYB83   --------->ANAC58                <---------YAB1   <---------YAB1------- -----ANAC58 --------->MYB46(3)--------->ANAC58            --------->TOE2(3)    <-----------GT1   <--   ttgtcaatctttgttaccaacgccaattcacacaagaaatataatgtgagacatttttcatcgttatcatacaaccgtgaatatacttgtcaagcaatgt  1969400                                                                          ---------->ID1                                                                      <---------AHL20(2)                                                                    <---------YAB1                                                                   <---------AHL20(1)    <---------GLK1(2)                                              <---------AHL20(2) <<<<<<<<<WRKY43                                                 <---------YAB1 <<<<<<<<<WRKY38                     <---------TOE2(3)           <---------AHL20(2) <<<<<<<<<WRKY26                --------->ANAC58                <---------AHL20(1) ----MYB46(1)                 <-----------GT1 --------->ZAT6  <---------TOE2(3) -----RAV1(1)  <-------TEIL <-----------GT1 <-----------GT1   <---------YAB1 -->ICU4      --------->CCA1(2) --------->ANAC58             --------->AHL20(2)    <---------GLK1(1) ----MYB83   <---------ARR11(3) --------->ANAC46             --------->YAB1<---------ANAC46   tggtcaaattctcaagatacaagagttttttttcacgctaatgtagtcacactacaaatccattaatattatttttttcgtttagaaatcacacataaaa  1969500              <------MYB83              <------MYB46(1)           <-------GAMYB          --------->MYB52(2)                                                               ----------          --------->MYB55(2)                                                              --------->DAG2          --------->MYB111(2)                                                --------->ATHB12 <------          <---------MYB46(3)                                        --------->ANAC46      <----------      <---------YAB1                      <---------CCA1(2)         --------->ANAC58      -----------  <---------GLK1(2)                    --------->LBD16              --------->ANAC58 <-------TEIL   catagattgtgtttgttggtataagtgatagagagagcatccccatatcattttccaaacacaaatgctcacaccaaaatggttgagttcataaggtaca  1969600                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                           --------->ANAC46                                                                           --------->ANAC58                                                                           --------->ANAC58   <---------ALFIN1                                                    --------->ANAC58   --------->ANAC46                                                    --------->ANAC58 ->GT1                                                                <---------------AtSPL3 -TEIL    <---------YAB1              <----------DOF2         <------ZmHOX2a(1) <---------ALFIN1 -----AtSPL8                  <-----------GT1            <----------DOF2  --------->SPL7  --------->GLK1(1) ---->AtSPL3              <---------YAB1                <---------ICU4<---------------AtSPL8     ----   tttccacacattatgcttaagtttcactcttattacacttctttgaaatgtctattaatctttaggaattagcaagtacgacacacattcaaatatccaa  1969700  Previous    Next  AGI:  At5g06450.1    Description:  nucleic acid binding. Identical to Uncharacterized protein At5g06450 [Arabidopsis Thaliana] (GB:Q9FNG3); similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G11770.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) Range:  from: 1967724    to: 1969224    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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