Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <<<<<<<<CAMTA3                         <-------MYC3              <-----------HVH21              ----------->RAV1(1)             ----------->HVH21            --------->DEAR3(2)            --------->MYB46(3)                  <----------DOF2                            <---------ANAC58   <---------ANAC58      ------->MYC3  --------->At4g35610                                 <---------ANAC58   --------->ANAC46     --------->O2   <---------ZAT2<---------ANAC58                <---------DAG2<-   --------->ANAC55(2)  --------->ANAC58    <----------DOF2           <-------MYC3   <----------DOF2   <---------ANAC58     --------->ANAC58<---------GLK1(2)   --------->YAB1       <-----------GT1 <--- <-----------GT1      <---------ALFIN1 <---------At4g35610  <---------ICU4   <----------DOF2   ------ -->TEIL  --------->MYB52(1)    ------>ZmHOX2a(1)    <---------ANAC58 ------->MYC3  <---------DAG2---   tgtttacgtcccaaaccgacagagccacgcgttcctctctcagcttctttcttttgcttccatcataactcacatgcctcttttcacctttttccttgtc  1952500                                                                                  <---------ANAC58                                                                                  <---------ANAC58       <----------DOF2                                                     <---------ANAC55(2)    <-----------GT1   --------->YAB1                                       --------->ANAC55(2) --------ICU4        <---------YAB1                      <-----------GT1 --------->AHL20(2)     <---- ------MYB59     <---------ANAC55(2)                  <---------ICU4     <-----------GT1        <---- ---->ID1        --------->ANAC55(2)        --------->WOX13(1)        <---------ICU4    <<<<<<<<<<<<< --->ZmHOX2a(1) --------->MYB59           <---------ATHB12   ------>ZmHOX2a(1)  <---------YAB1  <----   ctaatttcactttcaagttaagtatcatcacacttattcattcagtcattcacacattatttcctctcaccaaaattacataattcttgtgaacattggc  1952600                                                                                                -----                                                                                              -------                                                                                            <--------          ----------->GT1                              --------->ZAT2                ---------->DOF2 -----ANAC46                                           <---------ZAT2             --------->ANAC58 -----ANAC58        ---------->DOF2        --------->ANAC58                       --------->ANAC58  - <<<<LFY---------->DOF2 ----------->GT1    --------->ANAC58                       --------->AtLEC2  - -----ANAC58    ---------->DOF2    <------ZmHOX2a(1) <------NtERF2      ----------->GT1     ---------   ttaaaaccaaaaaagaaataaagaaagagtaataagaggaagtagaagccaaggccgagccgagtcgagtcgagaggtgaaaacatgcaaagtcagcaac  1952700                 <---------PCF2                 --------->PCF5          <------MYB83          <---------ANAC58          <---------ANAC58                                                                <---------CCA1(2)          <------MYB46(1)                                                           ------>MYB46(1)    <---------AHL20(2)                                                            ------->GAMYB   --------->AHL20(2)        ------>MYB83                                         --------->AtMYB61 ---->ICU4<---------ANAC46--------->MYB46(3)                                      <---------MYB59 ---->RAV1(1)    --------->TCP16(1)      --------->DAG2                          --------->MYB46(3) -At4g35610   <---------AtMYB61         ---------->DOF2                   ----------->RAV1(1) <------ -------->AHL20(2)   --------->ANAC46 <---------HSFB2a(2)        ----------->RAV1(1)------>MYB83 -------->YAB1--------->ALFIN1----------->RAV1(2)               --------->ANAC46--------->ANAC58 >At4g35610 <---------ANAC46 ------>MYB46(1)                  --------->ANAC46  --------->ANAC58    <   aattataaaatttggtgtggtccccataaccagcctggttcgaaaagtcggaaaacccaaaactacacaacatagacaacacaaccaaactcatctcttt  1952800                         ------>NtERF2                         ----------->RAV1(1)                        --------->RAP2.3(3)                        --------->DEAR3(1)                        <---------ETT(1)                        ----------->HVH21             ----------->GT1                        --------->DREB2C(2)         *TSS --------->ZAT14                <---------AHL20(2)                        --------->ANAC46            ---------->DOF2                     <---------AHL20(1)                        --------->At1g77200     ---------->DOF2                         --------->AHL20(1)     --------->ZAT6     --------->DEAR4(1)  <---------TOE2(3)                           --------->AHL20(2)   <-----------GT1     --------->RAP2.3(1)--------->AHL20(2)                     ----------->GT1 ----DOF2  <---------ALFIN1<---------ALFIN1---------->DOF2                --------->AHL20(2) ----------DOF2      --------->DEAR3(1)   <---------AHL20(2)   <----------DOF2 ---------->DOF2   ttctttaacacttccacttgccatcgccgacacttcaagaaaaattaaagaaaagaaagtaaactctttcaccaaaaaaaataaagaaaatttattgttc  1952900                                                                   <---------MYB52(1)                                                                   <------NtERF2                                                                  ------>NtERF2                                                                  <---------RAP2.6(3)                                                                  <-----------HVH21                                                                  <-----------TGA1                                                                 --------->RAP2.6(2)                                                                 --------->RRTF1(2)                                                                 --------->RAP2.3(3)                                                                 --------->DREB2C(2)                                                                 --------->RAP2.3(2)                                                                 --------->DEAR3(1)                                                                 --------->RRTF1(3)                                                                --------->ERF1                                                                --------->RAP2.3(1)                                                               <---------ATERF1(1)                                                              --------->DEAR3(1)                                                              <---------ALFIN1                                                             --------->RAP2.3(1)                                                         <---------ATERF1(1)                                                         <---------MYB46(3)                                              ------>NtERF2  <------NtERF2                 ------>ZmHOX2a(2)            <------NtERF2 <---------RAP2.3(1)               --------->ARR11(3)             --------->LBD16--------->ATERF1(1)               <-----------ARR10             --------->DEAR3(1)------>NtERF2               <---------ARR11(3)            --------->RAP2.6(2)--------->RRTF1(1)               <---------AGP1               <---------LBD16--------->ARR14(2)               <---------ARR14(2)           --------->RAP2.3(1)--------->LBD16               --------->ARR14(2)         ------>ZmHOX2a(2)<---------PCF2              <---------ARR14(1)         <---------GLK1(1) <---------ARR14(2)              <---------CCA1(2)         --------->ARR14(2)--------->ATERF1(1)          --------->GLK1(2)    --------->At4g35610   <-----------RAV1(1)      --------->YAB1           --------->GLK1(1)------->TEIL<---------ATERF1(1)     <---------YAB1            <---------At4g35610 --------------------->WRI1 <----------DOF2      <- <----------DOF2<------ZmHOX2a(2)       <---------ARR14(2)<------NtERF2   <---------CCA1(2)      ----   catctttctgataatcggatcttacagagagagagctccatggatcgccgcatctatggtggctccgccgtcattcatctctttctcttcttctccgtcc  1953000              <---------At4g35610             --------->ARR14(2)                             =========================HOX2a_HOX2a             <---------ARR14(2)                            --------->AGP1             ------->TEIL                                 <---------At4g35610           ------>NtERF2                              <-----------HVH21           <------NtERF2                            <---------MYB46(3)           --------->LBD16                          <---------DEAR3(2)          --------->RRTF1(2)                       --------->ETT(1)          --------->RAP2.3(2)                    --------->ARR14(2)          --------->DEAR3(1)                     <-----------HVH21          --------->RAP2.6(2)                    <---------ARR14(2)         --------->RAP2.3(1)                   --------->LBD16        <---------ATERF1(1)                   <---------ANAC46        --------->At4g35610                   <---------ANAC58        ------>NtERF2                         <---------ANAC58        --------->LBD16                       --------->HSFB2a(2)       --------->ANAC46                      ----------------->AGL1       --------->DEAR3(1)                    <-----------------AGL1              <---------CCA1(2)      <---------LBD16                        <---------LBD16<------ZmHOX2a(2)  --------->TOE1(1) ----------ARR10                        ------>ZmHOX2a(1) --------->At4g35610  --------->TOE2(1) -->ZmHOX2a(1)--------->At4g35610       ===========================HOX2a_HOX2a------>ZmHOX2a(1)   taatcttctccgccgcatctgcattatccaagaaccagtctccttcttccgggtcgggtcagatcaactccaactctgtcctcgtagctcttcttgactc  1953100                  <---------At4g35610                  --------->ZAT2                  <---------ZAT2             --------->ZAT2             <---------ZAT2             <---------At4g35610         ------>ZmHOX2a(1)      <---------MYB46(3)                  -             --------->At4g35610         <-----------HVH21      <------MYB83                       <-         --------->ZAT2         --------->ARR11(3)              <------MYB46(1)               -------         --------->At4g35610    <---------ARR11(3)             <---------AtMYB61              -------         <---------At4g35610---------->DOF2                   <---------MYB52(1)       <-----------GT1         <---------ZAT2  <---------HSFB2a(2)                 <-------GAMYB    <-----------GT1------>ZmHOX2a(1)     --------->ANAC46    --------->HSFB2a(2)                <-----------RAV1(1) <---------YAB1-------   tcgttacactgagctagctgagctcgtcgagaaagctcttctccttcagacacttgaagacgctgttggtcgtcacaatattaccatttttgctcctcgc  1953200                     <---------WRKY18(1)    --------->ARR11(3)                       <---------ANAC58                                      --    <---------ARR11(3)    --------->LBD16    <---------ANAC58                                      <-  ------->TEIL      --------->WRKY12     <---------ANAC58                                          -- --------->DOF2     ----------->HVH21    <---------ANAC58                   --------->ZAT6         -- --------ATHB12     --------->WRKY38(1) <---------MYB46(3)       <-----------ARR10        <---------ALFIN1 -->ANAC58    ----------->HVH21        <---------ARR14(2)       <---------CCA1(2) ------>ZmHOX2a(1)-- -->ANAC58  <---------ANAC58           --------->ARR14(2)   --------->TOE2(3) --------->ANAC46     -- -->ANAC46  <---------ANAC58    ---------->DOF2     <-----------RAV1(2)     <---------ALFIN1     <---   aatgaagctcttgagcgtgaccttgaccctgagttcaagcggttcttgctcgagccaggtaatctcaaatctctgcaaacactcctcatgttccacatta  1953300                                                            --------->ANAC58                                                          <---------ALFIN1                                                        --------->AtMYB61                                                    --------->MYB46(3)           <---------MYB46(3)                   --------->WRKY18(1)           <---------DEAR3(2)                  <-----------HVH21          --------->ETT(1)                   <---------DEAR3(2)                                   ---        <-----------HVH21                    <---------MYB46(3)                             ------->GAMYB ------->ANAC58                             --------->ETT(1)--------->ANAC58      <---------MYB52(1) ----------------AGL1                <---------ARR14(2) <---------ALFIN1       <-------TEIL<---------MYB52(2) ------->ANAC46                     <---------ARR14(2) --------->ANAC58      --------->ARR14(2)  ---- --------------->AGL1           <---------At4g35610--------->ANAC58      <------ZmHOX2a(2) --------->MYB46(3) --------------->AG             --------->At4g35610--------->ANAC58  <---------KAN4(2)    --------->At4g35610 ------->ANAC58      --------->MYB52(1)   <-----------HVH21 --------->ANAC46 <---------ARR14(2)  ---- --------GT1       --------->MYB46(3)--------->GLK1(2) --------->ANAC58 <-----------HVH21--------->MYB52(1)   tacccaatcgggtcgggtcgaaccaatggccttcagaagaatcgggtcgggtcaagcaccacacgctagggaacgatcaggtccgtttgagcaacggaca  1953400  Previous    Next  AGI:  At5g06390.1    Description:  FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR). Identical to Fasciclin-like arabinogalactan protein 17 precursor (FLA17) [Arabidopsis Thaliana] (GB:Q66GR0;GB:Q9FNG9); similar to FLA18 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 18 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT3G11700.1); similar to fasciclin-like arabinogalactan protein 14 [Gossypium hirsutum] (GB:ABV27485.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 1952852    to: 1955789    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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