Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                              ------>ZmHOX2a(2)                               <------                               --------->ATHB12                                              <-------        <---------YAB1        <---------YAB1  ===========================HOX2a_HOX2a  --------->ANAC46      --------->YAB1        --------->ANAC55(2)                                       --------->ANAC58 -------ICU4                <---------ANAC55(2)                               --------->AHL20(2) ------>YAB1              --------->AHL20(2)--------->ARR11(3)    ------>ZmHOX2a(1)   --------->ANAC58   gcattatatcatactagagacacttcaattacatgattcgataactgatctcgttcgaaagataaatcctaattcatcgattaaatccacacaataccta  1948200                                                                                         <---------ARR11(3)                                                                                    <---------ARR14(2)                                                                                    --------->ARR11(1)                                                                                    <---------ARR11(3)                                                                                    --------->ARR14(2)                                                                                  ----------->ARR10                                                                              <------ZmHOX2a(1)                                                                            --------->LBD16------>ZmHOX2a(2)                                                             <---------REM1(1)====================HOX2a_HOX2a                                                   <---------ANAC46        <-----------RAV1(2)                                                ----------->HVH21          <---------HSFB2a(2) ------                                              <---------ANAC58             --------->HSFB2a(2)<------ -->TOE2(3)                 <---------TOE2(3) <---------ANAC46           =========================HOX2a_HOX2a -->TOE2(2)                --------->DAG2     <---------ANAC58    --------->At4g35610    --------->ARR11(3) ---MYB59                 ---------->DOF2    <-----------------AGL1      ------>ZmHOX2a(1)--------->GLK1(1) --ANAC55(2)             --------->CCA1(2)  <---------At5g28300   <---------At4g35610--------->CCA1(2)   agttttgtcaaactcattagtagagagataaaggaattggaatagataccgtgatgggcatagatgtaagcagtcctccaggagtagatatgatctccag  1948300                                                         <---------MYB52(1)                                                        <-------GAMYB                                            <---------ANAC58                                            <---------ANAC46                                 --------->CCA1(2) <---------YAB1                            ---------->DOF2 <---------ANAC58 --->LBD16        --------->GLK1(2)  ---------->DOF2   ------>ZmHOX2a(2) -----RAV1(2)    <---------GLK1(2)<-------TEIL   <---------At4g35610    ---------->DOF2    ----------   gtttcaaactcgatctatcgattctgttcaaaaagatacaaaagtttcttgagatgatcgttaagtagaataactaaagagttctcagaaaatcaaagag  1948400                                                                          <----------DOF2                                                                          <---------DAG2                                                                        ----------------->AGL1    --------->ANAC58                                               <---------At4g35610    --------->ANAC58                                <---------ANAC46   --------->ARR11(3)    --------->ANAC46         <---------CCA1(2)   --------->bZIP60(2)   <---------ARR11(3) >DOF2     <-----------RAV1(1)              --------->HSFB2a(2)    --------->At4g35610              -   gggaagacgaaacctgttggagagaagacccatctcttcttagtttctgcaacgtcgtagaagaggcgaagcagacctttttgtgaaacttatcttcaag  1948500                                  <---------MYB52(1)                                <---------ANAC58                                <---------ANAC58                            <---------ANAC58                                    ---------->DOF2                            <---------ANAC58                         ----------->GT1                   --------->HSFB2a(2)                               <---------ANAC55(2)                   --------------->AGL15                       ---------->ID1 <---------AHL20(2)                   <---------------AGL15                   <----------DOF2--------->ICU4                   <---------HSFB2a(2)                <----------DOF2--------->ANAC55(2)       ------                  <-----------------AGL3          <XXXXXXXXXXXXXXXXXXXMIR156H --------->AHL20(2)    - --------->DOF2   <-----------------AGL2          <----------DOF2 <---------MYB52(1)      ---------->DOF2   acaaaagagagaattgttttgctagaaatggcttccgttttcaatctccatgctttctttcctttgtcgttaagtaaaaattaaaagcgagagaaagaga  1948600                                                        <-----------------AG                <---------ANAC58                        <-----------------AGL1                >>>>>>>>CAMTA3               --------->LBD16                <---------ANAC58            --------->HSFB2a(2)                <---------O2                <---------HSFC1(1)                       <---------DAG2         ----------->HVH21                  --------->HSFC1(1)                       <----------DOF2       --------->ALFIN1                     <---------HSFB2a(2)            <---------AHL20(2)   <-----------RAV1(2) <------NtERF2       <---------LBD16                --------->AHL20(2) --->CCA1(2) *TSS<-------MYC3            <-----------GT1----------------->AGL1   <---------PCF2 ---------->HVH21------->MYC3    <----------DOF2  <------------CBF       ----------->TBP   cagggacaggtgtgaaacgcgtggcatcgtttcttcttttttttttccagaaaattgggcctgttttggatacctataaaatgggccctttttcatggga  1948700                                                                    --------->ATHB12                                                                   --------->AHL20(1)                                                                   <---------AHL20(1)                                                               --------->AHL20(2)                                                               <---------AHL20(2)                                                       ----------->GT1  <---------ZAT18         -----                                                      ----------->GT1   --------->ZAT18      --------                                              ----------->GT1 --------->AHL20(1) <---------AHL20(2)                                <---------MYB52(1)   --------->DAG2<---------AHL20(2)       ---------            --------->ARR14(2)<---------ZAT6 <---------ANAC46 <---------AHL20(1)--------->AHL20(2)      <---------ARR11(3)    <---------At5g28300----------->GT1<---------AHL20(2)--------->AHL20(1)      --------->ARR11(3)<----------DOF2      --------->ALFIN1 --------->AHL20(2)<---------AHL20(2)---  ---------->DOF2 <---------GLK1(2)<---------YAB1   ---------->DOF2--------->AHL20(2)  <<<<<<<<<<WRKY63   cttataaaggtctaaatccacattctcttttactgttatgttttgatgtgggtaaaaagttaaatttaatttattgcacaaatttaatagtcaaataata  1948800                                                                                 <---------AHL20(1)                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)         <---------WRKY38(1)                                               ----------->GT1  --------->ATHB12                                                         <------MYB83 ----->DOF2                                                                <------MYB46(1)        --- ->YAB1 --------->WRKY18(1)                          --------->AHL20(2) --------->CCA1(2)        <--- >AHL20(2) <<<<<<<<<<<<WRKY18               <---------YAB1     <---------ANAC46  --------->AHL20(1) -------->GT1--------->YAB1              <---------AHL20(2) <---------ZAT6--------->MYB59     <------   aagtttattggtcaatagtcaatattcaaagttttttttatattttatcaatgttttaaatagtgttgtatgagatttggtaataaatttgtctaattta  1948900                        <---------ARR14(2)                        --------->ARR14(2)                        <---------ARR11(3)                        --------->ARR11(3)                       <------ZmHOX2a(1)                 <---------YAB1           <---------ICU4           --------->ATHB51           <---------AHL20(2)           <--------ATHB1<------ZmHOX2a(2)          --------->ICU4<-----------ARR10          <---------ATHB12               <---------TOE2(3)          <---------ATHB51------>ZmHOX2a(2)      <-----------GT1           <---------MYB52(1) ------>YAB1    <---------At5g28300 <---------AHL20(2)             --------->ANAC46     --------->AHL20(2) ------YAB1--------->AHL20(2)      <---------AHL20(2)         ------>MYB83<----------DOF2      ------ ---AHL20(2)   <-----------GT1     --------->AHL20(2)         ------>MYB46(1)   <---------AHL20(2)   tgaaaatttccaataatttaccataggatctacataattttataagattagtaactggttaaccaaatcacacagcctttattttttttataaaatgtat  1949000                                                                                                 <---                                                                                                 ----                       --------->CCA1(2)                                                         ----                      <---------ARR11(3)                                                ---------->DOF2                      --------->ARR11(3)                                              --------->ANAC46          --------->DAG2                                                              --------->ANAC58         ---------->DOF2   --------->DAG2                 --------->ARR11(3)          --------->ANAC58       <---------------AGL15                          <---------ICU4            <----------DOF2  ----      ----------------->AGL2                          --------->YAB1         --------->ARR11(3) <----      ----------------->AG---------->DOF2            --------->ICU4          <---------ARR11(3) <----      ----------------->AGL3                         <---------YAB1          <-----------GT1    ----- ->TEIL--------------->AGL15                    <---------ANAC46<---------ZAT6<---------YAB1   <-----   ttgcattatccaaaagtagtagtagatataaagtgctagtaagaatgctggtgtgataattatctagtggtattgatattatctttatacgaaagttaat  1949100  Previous    Next  AGI:  At5g06370.1    Description:  NC domain-containing protein. similar to NC domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G02700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50149.1); contains InterPro domain NC (InterPro:IPR007053) Range:  from: 1947140    to: 1948613    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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