Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                       --------->O2                             ----------->RAV1(1) -                                     <---------ALFIN1                     --------->ANAC46          -                                    <------NtERF2                        <---------LBD16           --                                   ------>NtERF2                         --------->SPL7            --                                  --------->ANAC46                      <<<<<<<<<SPL4           -----                                  --------->ANAC58             ---------->DOF2------>NtERF2   <------           <---------HSFB2a(2)    --------->ANAC58     ------>ZmHOX2a(2)<<<<<<<<<SPL7 --------->MYB52(1) ---->GAMYB--------->HSFB2a(2)  ------>ZmHOX2a(2)      =====================================HOX2a_HOX2a ----->MYB46(3)             <---------YAB1         ------>ZmHOX2a(1)<------------------SPL14  ------- ------MYB52(2)<---------REM1(1)==========================HOX2a_HOX2a  <---------SPL7<------ZmHOX2a(1)   cgaactcgaccgtcgagatgaagcatcaacatgatcgcgccacttgaatggtcctgatcgagatagaaagcgttgtacggagccacaggaacggagtatc  1935200                ------>MYB46(1)     ---------->DOF2   --------->ANAC58   --------->ANAC58 ------>GAMYB   --------->MYB52(1) -------->At1g77200                                                                  <---------MYB52(1) -------->DEAR3(1)   --------->WRKY45                                               --------->LBD16 -------->DREB2C(2)  --------->WRKY12                                             <---------LBD16 ------->MYB46(3)    --------->WRKY38(1)                                  <-----------RAV1(1)       < ------->DEAR3(2)   --------->DOF5.7(2)           --------->ANAC58       ------>ZmHOX2a(2)         -- ---->MYB46(3)  ------>MYB83<----------DOF2       --------->ANAC58      <---------At4g35610  <------- ---ARR14(2)  <---------MYB59                   <--------P       ---------->DOF2  <------NtERF2    -- -->ARR14(2)  --------->AtMYB61      ------>ZmHOX2a(1)         <------NtERF2<---------MYB52(1)     <-   caccgacgaaaggagaccaaacgttgacttctttgtgtccttgataagtggtaagcatgggactcggcaaagtgatctgttggctccggtaagaagcgta  1935300                                                                                              <------                                                                                           <---------WOX13(1)                                                                                          <---------ANAC58                                                                                     <------MYB46(1)                                                                                     <------MYB83<---                                                                                     <---------ANAC46                                                                                    <---------MYB46(3)                                                                                    --------->MYB52(2)                                                                                    --------->MYB46(2)                                                                                    <---------DEAR3(1)                                      <---------ZAT6                                --------->MYB55(2)                                  <---------MYB52(1)                               <-------TEIL -----                               ---------->ID1                                     <---------ARR14(2)                           ------>ZmHOX2a(2)                                     <---------SPL7<-----                           =============================HOX2a_HOX2a             <---------HSFB2a(1)                          <------ZmHOX2a(2)                                     <---------HSFC1(2)                          ==============================HOX2a_HOX2a             --------->HSFC1(2) -----------HVH21        --------->ARR11(3)                                     --------->HSFB2a(1) ------->ANAC46          --------->ARR14(2)      <------ZmHOX2a(1)            <------ZmHOX2a(1)------ --ANAC46                <---------ARR14(2)<---------ANAC55(2)            --------->ALFIN1<---------ANAC58 ------->O2        --------->ARR14(2)<---------TOE2(3)                  <---------At4g35610<---------GLK1(1) --------O2        <---------ARR14(2)<---------TOE1(3)----------->GT1  <---------TOE2(3)<---------MYB46(3)   gacgtcaagacggtcgtagtagataccgatcttgtcgttagggttacgagaggagagagtgaattggaaatttgaggtgaggaggttcggtggattgccg  1935400                                <------ZmHOX2a(1)                         <---------ANAC46                        <------NtERF2                      <---------ANAC58                      <---------ANAC58                      <---------ANAC46                      <---------RAP2.6(2)                     <------NtERF2                     --------->ATERF1(1)                         --------------->AGL15                    ------>NtERF2                                <---------------AGL15 ---LBD16           <---------ATERF1(1)             <-------GAMYB----------------->AGL1 ---NtERF2          --------->ABI4(2)              <---------MYB46(3)     <------ZmHOX2a(1)       <-- ---->LBD16        <---------DEAR3(1)  <---------ANAC58         ----------------->AGL1 --------->ANAC58 ----ANAC46        --------->ALFIN1    <---------ANAC46      <---------GLK1(1)         --------->ANAC58 --->ETT(1)     <---------DEAR3(1)     <---------ANAC58    <------ZmHOX2a(1)      <----------ID1  ===   gagacgttgaagttgaagacggtggcgtcttggaggacgaagcgtggtttcgatggttgaaggattgcccaaactaggagaattacgacaaggattaaga  1935500                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                 <---                                  ==============================MYC_MYB                         <----                                  <-------GAMYB                                                 -----                                <---------TOE2(3)                                            <-------                                <---------TOE1(3)                                            <-------                               <---------At5g28300    ===========================bZIP_DOF -----------                              <-----------GT1         <---------O2                        -----------                     <------ZmHOX2a(2)                --------->TGA1a                    <-----------HVH21                     --------->ZAT14                  <---------ANAC58                  --------->LBD16    --------->ATHB12<---------ARR11(3)       --------->ALFIN1                           <---------At4g35610   <---------YAB1<---------HSFB2a(2)  <---------ANAC58<---------ANAC58                  --------->At4g35610 ===========================HOX2a_HOX2a     --------->ATHB12                 <-----------HVH21  <---- <------ZmHOX2a(1) <---------At4g35610<---------ANAC58<---------ANAC46     <---------TOE2(3) <------- ----ZmHOX2a(1)  --------->HSFB2a(2)  <---------AtLEC2<---------TGA1a <----------DOF2 <---------LBD16 ===========================HOX2a_HOX2a    <---------YAB1      ----------->RAV1(1)xxxxxxxxxxxxxxxxxxx   ggaggattattgatatcgtccagatcactattttacggttgcatgatgagtggctgtcgtgagagccacagtcttttgaggtcatagctccggtgacggt  1935600           <------MYB83           <---------ANAC46          --------->MYB55(2)          --------->MYB111(1)          <---------AtMYB61          --------->MYB111(2)      <------MYB46(1) --------->ALFIN1 ------->ALFIN1 --------ANAC58 --------ANAC58 --------ANAC46                      --------->AHL20(2) ------MYB46(3)                   --------->YAB1 -----AtMYB61                     --------->TOE1(3)      <-----------TBP ---->ALFIN1                      --------->TOE2(3)      --------->AHL20(2) --DREB2C(2) <---------AtMYB61  --------->GLK1(2)      <----------DOF2              ---------->DOF2 --DEAR3(1)<------MYB46(1)      --------->ARR14(2)     <---------------AGL15      --------->CCA1(2) >HVH21   <---------MYB46(3)    <---------ARR14(2)     --------------->AGL15   ----------->GT1 >TGA1<------MYB83      --------->DAG2            ----------->HVH21          ---------->DOF2 -----DEAR3(1)<---------MYB46(3)<---------ARR11(3)<---------MYB52(1)        <---------AHL20(2)    --- --ANAC46 --------->MYB46(2)   <---------GLK1(2)--------->ANAC46          <-----------TBP     <------ x>smallRNA(s2)        ---------->DOF2       *TSS--------->LBD16      ----------->GT1         -------   ggtgtgggaggtttggtggtagagagaaagtgagaatcttaaaatactctccgtgacctttatatagaagaagtgtatataaagataaaagtacttgtag  1935700                   <---------CCA1(1)                   --------->CCA1(1)                   <---------GLK1(1)                   --------->GLK1(1)                       --------->YAB1                   <---------RVE1(1)                       --------->MYB52(1)                   --------->RVE1(1)                    --------->YAB1            --------->ARR11(3)                         <---------YAB1        ---------->DOF2                               <---------AHL20(2)     ----------->TBP                                  --------->AHL20(2)  ---------->DOF2   --------->CCA1(2)   <----------DOF2         ----------->GT1   ---------->DOF2  --------->ARR11(3)--------->ARR11(3)        --------->DAG2  --------->TOE1(3)                 <----  <---------ARR11(3)<---------ARR11(3)       ---------->DOF2  --------->TOE2(3)             --------- ------->DOF2     --------->ARR11(3)     <---------HSFB2a(2) <----------ID1           <---------ZAT6 ---HSFB2a(2)     <---------ARR11(3)     --------->HSFB2a(2)<---------TOE2(3)   <---------------AtSPL3 -->HSFB2a(2) ---------->DOF2        <----------DOF2<---------YAB1--------->DAG2<---------------AtSPL8   aaaagatataaaaagataaagatatcttttctatatagtctttgtagaaaagttattttaataacgataaagtatagaaagtatggtactgtaagtataa  1935800                                               --------->CCA1(2)                                              <---------ARR11(3)                  <---------YAB1          ---------->DOF2             --------->YAB1            <------MYB83             <--------HAHB4            <------MYB46(1)                  <-----------RAV1(1)             <---------ICU4            ----------->GT1                 <---------TOE2(3)             -------->ATHB1          <---------WOX13(1)              --------->AHL20(2)   ===========            --------->ICU4         --------->ATHB12            ----------->GT1   <-----------GT1         --------->AHL20(2)       <---------YAB1     ----------->GT1 <---------AHL20(2)   <---------- -----TOE2(3)--------->ATHB51 <---------ANAC58--------->ARR11(3)    <---------YAB1        ----------- >YAB1  --------->ICU4        <---------ANAC58--------->AHL20(1)    --------->ICU4      <---------AHL20(2)   tgttttggtaatgaattattacgaatacttatgggtgtgattggtaaagatattagagtaatatggagtaattaatgttggagtaactattttttttttt  1935900                     --------->YAB1       <---------MYB46(3)                <------ZmHOX2a(2)        <---------YAB1         --------->YAB1                <---------ICU4                                               -        <---------YAB1                --------->ICU4                       <-----------GT1     ------       --------->ARR11(3)             <---------YAB1                 --------->ANAC55(2)       ------       <---------ARR11(3)   <---------AHL20(2)                <---------------AGL15            <----- =============================================================================MADS_MADS       <------ -----AGL15    <---------ARR11(3)   --------->YAB1            --------------->AGL15        <---------AHL20(2) ---->AGL15    --------->ARR11(3)  <---------YAB1  <---------AHL20(2)<---------ANAC55(2)  --------->AHL20(2)   ggtaactaatatcataagatcaaaaatgatataatttgtgataatggttgtatttgatttgtttctgtattaagtattaactcgttgtgatattatatat  1936000         <---------MYB52(1)        <---------RAP2.6(3)        <-------GAMYB       ----------->GT1          <---------YAB1                 <------ZmHOX2a(2)     <---------At5g28300      --------->YAB1                  --------->ARR11(3) -------->ATHB12             <---------YAB1       --------->ANAC55(2)       <---------AHL20(2) --->AHL20(1)      <-----------RAV1(1)      <----------DOF2   <---------ARR11(3)  <-----------GT1 --->ARR11(3)     <---------TOE2(3)         <---------DAG2  ----------->ARR10<---------AHL20(2) ----AHL20(1)   <---------AHL20(2)   --------->DAG2      <---------ANAC46   --------->AHL20(2) ---AHL20(2)   --------->AHL20(2)   ---------->DOF2 <---------ICU4       --------->YAB1   attgatttgccgttaaattttatgttgcattatcatgaaaaagtgactttttaagtattgcgaagatcagaacatttataaatttaagcattttttagta  1936100  Previous    Next  AGI:  At5g06330.1    Description:  hairpin-responsive protein, putative (HIN1). similar to NHL1 (NDR1/HIN1-like 1) [Arabidopsis thaliana] (TAIR:AT3G11660.1); similar to hairpin-induced 1-like protein NHL18B [Brassica napus] (GB:ABB36604.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 1934740    to: 1935645    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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