Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ARR11(3)                             <-----------HVH21               --------->ANAC58                            <---------O2             <---------ARR14(2)    <------NtERF2                            --------->ANAC46         --------->ARR14(2)  <---------ANAC46           -       ----------->GT1      --------->TGA1a         <------NtERF2       <------NtERF2               -    --------->ATHB12        --------->ANAC58      <---------ANAC46      <---------LBD16             < ------>ANAC55(1)           --------->ANAC58     <------NtERF2          --------->At4g35610       --- ------>ANAC58              <---------TGA1a     --------->LBD16         ------>NtERF2      --------->At4g35610 -------ANAC55(2)           --------->bZIP60(2)--------->ANAC46        <---------ATERF1(1) <---------At4g35610 ------>ANAC58              --------->O2      <---------LBD16--------->ANAC58              --------->ZAT2 ------>ANAC55(2)  <---------ATHB12--------->ANAC58<---------MYB46(3) <---------DEAR3(1)  ----------- ------>ANAC46   --------->WOX13(1)--------->ANAC58--------->LBD16   <---------LBD16      ===========   acgaaacgattgaaaaatccaatcaaacacacgtcgcaagaactgaaacccggcggataagtgaagccaaacgcggcggaagaattgagaaccagcagaa  1918500                                                                                         <---------MYB46(3)                                                                                        --------->ALFIN1                                                                                        <---------ANAC46                                                                                       --------->At5g28300                                                                                       <------NtERF2                                                                                       <-------GAMYB                                                                                      <---------DEAR3(2)                                                                                      <---------MYB46(3)                                                                                     <---------AtMYB61                                                                                     --------->ALFIN1                                                                                     <---------ANAC46                                                                                     <---------DEAR3(1)                                                                                     <---------DREB2C(2)                                                                                    <---------ABI4(1)                                                                                    <------NtERF2                                                                                    --------->ATERF1(1)                                                                                   <---------RRTF1(1)                                                                                   <---------ORA47(2)                                                                                   <---------ERF1                                                                                   <---------DEAR4(2)                                                                                   <---------ATERF1(1)                                                                                   ------>NtERF2                                                                                   <---------RAP2.3(1)                                                                                   <---------RAP2.6(1)                                                                                  <---------RRTF1(2)                                                                                  <---------RRTF1(3)                                                                                  <---------RAP2.3(3)                                                                                  <---------ATERF1(2)                                                                                  --------->ATERF1(2)                                                                                  --------->DEAR3(1)                                                                                 --------->ATERF1(1)                                                                                 <---------ABI4(1)                                                                                --------->LBD16                                                                          <---------ARR11(3)                      <-------GAMYB                                       --------->ARR11(3)                      <---------ANAC46                                   <---------RVE1(1)                     <------MYB83                                        --------->RVE1(1)                     <---------MYB46(3)                ------------>AtMYB77     ------>NtERF2                     <------MYB46(1)              --------->MYB52(1)     <---------GLK1(1)             <---------ABI4(2)             <---------ANAC58              --------->GLK1(1)             --------->MYB46(3)            <---------ANAC58 <---------ARR14(2)  <---------ATERF1(1)  ----------->HVH21  --------->MYB55(2)   <---------ZAT2    --------->ARR14(2)  <---------RAP2.3(1) -------->At4g35610  --------->MYB52(2)   --------->ZAT2   <-------GAMYB--------->ARR11(3) ---------->RAV1(2) <---------AtMYB61     --------->At4g35610           <---------ARR11(3)  --------- ---------At4g35610<---------MYB52(1)     <---------At4g35610     ------->TEIL <---------DEAR3(1) ------>YAB1--------->ANAC58        ---------->DOF2    ------------>MYB.PH3(1)<---------LBD16       = >RAV1(1)   --------->ANAC58  --------->CCA1(2)<---------ANAC58--------->ANAC55(2)<---------DEAR3(1)< ===========RAV   <-------GAMYB <----------ID1 <---------ANAC58<---------ANAC55(2)<---------RAP2.3(2)   tcatctgacgaagtaagcaccgttggttgaagataagacaaagcagcttgcttaacgagacggttacgaatcgagatatctccggcggcggtggatataa  1918600                   ------>ZmHOX2a(2)               --------->WRKY38(1)               --------->WRKY12              <---------MYB52(1)             <-------GAMYB          <---------At5g28300                                                                  ------          -------->P                                                                --------->ANAC58        <---------MYB52(2)         <---------ZAT14                                  --------->ANAC58       --------->ZAT2   --------->At5g28300                            <---------ZAT14---------->DOF2       <---------At4g35610      <---------ANAC46             --------->ARR11(3)  --------->TOE1(2)<--       --------->At4g35610      <---------ANAC58             <---------ARR11(3) --------->At4g35610    <---------At4g35610----------->GT1 ----------->GT1      --------->GLK1(1)   <---------At4g35610 >CCA1(2) --------->MYB52(1)    <---------ANAC58            <---------GLK1(1)  --------->ANAC58<----- =========================HOX2a_HOX2a  <---------ZAT6      <---------ARR11(3)  --------->ANAC58<----- ------ZmHOX2a(1)  --------->ETT(2)--------->ZAT14     --------->CCA1(2)   <---------ZAT6   <------ZmHOX2a(1)   caggagagcagctaccgttgatcgacggtaaattgagtgaagagttaatcggagaagagatgatatctctgagagaagtgtaagctacgaaagaggatgg  1918700                                     <-------GAMYB                                    <---------ANAC46                                    <---------DEAR3(1)                                   <------NtERF2                                   --------->ATERF1(1)                                  <---------ERF1                                  <---------RAP2.3(1)                                  <---------DEAR4(2)                                  <---------ORA47(2)                                  <---------ATERF1(1)                                  <---------RRTF1(1)                                  ------>NtERF2                                 <---------RRTF1(3)                                 <---------RAP2.3(3)                                 <---------DEAR3(1)                                 --------->DEAR3(1)                                 <---------RAP2.3(2)                                <------NtERF2                                <---------ABI4(1)      --------->At4g35610       --------->ATERF1(1)      <---------At4g35610      <---------ATERF1(1)                                        --------->CCA1(2)   --------->LBD16             <---------RAP2.3(1)             <---------HSFB2a(2)       --------->ARR14(2)  <---------ANAC46             <---------DEAR4(2)              --------->HSFB2a(2) --------->ICU4 <---------LBD16               <---------ORA47(2)             <---------LBD16      <-----------RAV1(1) ----->GT1                    <---------RAP2.3(3)        --------->ARR14(2)    ---------------------- --------DOF2        --------->TOE1(2)                --------->ANAC58         <---------RAP2.6(3)  < -MYB83       --------->ANAC58<---------RAP2.3(2)     --------->ANAC58         <-----------TGA1  <--- -MYB46(1)    --------->ANAC58<---------DEAR3(1)  --------->ETT(2)  <------ZmHOX2a(1)    <---------ARR14(2)   ttttacggagatgagctcgtaatcgaacgaagacggcggcgttgaagctatgtcgaaaggaacttctggaggagttagagtcgtcatgttggatatggat  1918800                                  <---------LBD16                                 <---------RRTF1(1)                                 <---------ERF1                                 <---------RAP2.3(1)                                 ------>NtERF2                                <---------ANAC46                                <---------RAP2.3(3)                                <---------RAP2.3(2)                                <---------DEAR3(1)                                <---------RRTF1(3)                                <---------RAP2.6(2)                                --------->ATERF1(2)                   --------->ATERF1(1)        <------NtERF2           <---------ATERF1(2)       --------->LBD16          <---------bZIP60(1)      <---------DEAR3(1)        <---------O2      <---------ANAC46       ----------->HVH21     <---------LBD16--------->DEAR3(1) --------->ARR14(2)                                          <-   <---------DEAR3(1) <------NtERF2   <---------GLK1(2)                                           <--   --------->ANAC46<------NtERF2<---------RRTF1(2)                                            <------  --------->SPL7   <---------LBD16<------NtERF2                           <------MYB83  *TSS<-------- ->TaNAC69(2)    <---------DEAR3(1)   <---------ARR14(2)        <------------------------ANAC81<----- ---------SPL7  --------->ATERF1(1)   --------->ARR14(2)     <----------DOF2  --------->MYB52(2) ---- ---------------SPL14--------->LBD16 <------NtERF2      <<<<<<<<<TBF1     <------MYB46(1) <----------   tttgtacggcggagttgagtcgccggagattgtgacggcggaatctccatagtctttcttcttctttttttttgtttggtttgtttgtgagtttgtggct  1918900                                             --------->ARR11(3)                                        -------->ATHB1                                        --------->ATHB12                                        <--------ATHB1                                        <---------ICU4                                        --------->ATHB51                                       <---------YAB1                                       <<<<<<<<<<AGL20                                       <<<<<<<<<<AGL24                                       <<<<<<<<<<AGL22                                       <---------ATHB51         <---------ANAC58              --------->ICU4--------->YAB1                      --------->ICU4         <---------ANAC58              <---------ATHB12                                <---------AHL20(2) --------WOX13(1)             ========================HOX2a_HOX2a                     <---------AHL20(2) ----------CBF                <------ZmHOX2a(1)------>ZmHOX2a(2)                      --------->AHL20(2) ---At4g35610             ============================HOX2a_HOX2a             <-----------RAV1(1)   - -RAP2.6(2)             <---------TOE2(3)<------------CBF   <-------TEIL--------->ARR11(3)          - ----ANAC46        <---------TOE2(3)------------>ATHB5      ------->TEIL<---------ARR11(3)    ------- ----->ATHB12     ---------->DOF2  ------------>CBF <---------YAB1  <-----------GT1   --------->ICU4< -RAV1(1)<---------ANAC46 <------ZmHOX2a(1)  <---------ARR11(3)    ---------->ID1----------->GT1   --   gattgggttttgcgagtgtttaaagtaaggaaggaggtccaattattgatctctatgatatgtacatttgtcactatcttgtgttgtattaattagtaaa  1919000                                      <---------WOX13(1)                                    --------->ATHB12                                   --------->ICU4                                   <---------YAB1                                 --------->YAB1                                <---------YAB1                              <--------HAHB4                              -------->HAHB4          <----------DOF2     <---------AHL20(2)     --------->DOF5.7(2)      -------->ATHB1  <-------TEIL                --------->ATHB51                                          <---------YAB1 --------->CCA1(2)            <---------ICU4                                         <---------YAB1 --------->ARR14(1)           --------->YAB1                                    --------->ATHB12 -------->ARR14(2)           --------->ICU4                    <-----------GT1 --------->ICU4 -------->ARR11(1)           <---------YAB1             --------->ANAC58      <---------WOX13(1) --->DOF2 <---------DAG2     <---------ATHB51           --------->ANAC58    <------ZmHOX2a(1) ---------ARR14(2)      --------->TOE2(3)         <---------ARR11(3)      <---------TOE1(3)         - ------->CCA1(2)      <---------AHL20(2)          --------->ARR11(3)      <---------TOE2(3)         <   gagatacgtttactttatttgtattttcttaattattatgattggaatggaagatagtaggcaaattacaaaatttaaggattgattactatttttgatg  1919100                                ------->GAMYB                               <---------MYB55(2)                               --------->MYB46(3)                      <---------ARR11(3)                              ------>MYB83                    --------->YAB1                              -------->P                     <---------YAB1                              ------>MYB46(1)              <---------ICU4                    --------                        --------->GLK1(1)                  --------->YAB1                  <---------LBD16                   <---------LBD16                        --------->ICU4                <---------SPL7               --------->AHL20(2)                      --------->AHL20(2)      <---------ALFIN1               <---------ARR11(3)                      <---------AHL20(2)--------->YAB1<---------ANAC58               --------->AHL20(1)             <---------GLK1(2)---------->DOF2<---------REM1(2) <----               --------->ARR11(3)   --------->TOE2(3) --------->AHL20(2)<---------YAB1 <---------ANAC58         ----------->GT1<---------GLK1(1)     <---------ARR11(3)       --------->ARR11(3)<---------ARR14(2) -------->ICU4 <---------AHL20(1) ------>MYB83--------->ARR11(3)      --------->YAB1  <------NtERF2 ---------YAB1 <---------AHL20(2) ------>MYB46(1) <---------YAB1     <---------YAB1 --------->ALFIN1   tgaagattagatggaaatatattcggaaatccaaccagcctaaaaatagattttgatttaattatcaaagtatgatcatcaacacggtgtcgttccggtt  1919200     --------->KAN4(2)    <---------KAN4(1)                           <----------DOF2                  --------->ANAC46    --------->KAN4(1)                         <---------At4g35610                --------->ANAC58   -    --------->HSFC1(2)                        --------->At4g35610       <---------CCA1(2)          --    <---------HSFB2a(1)             <---------HSFB2a(2)                 ---------->ID1             --    --------->HSFB2a(1)             --------->HSFB2a(2)            --------->ARR14(2)         <------    <---------HSFC1(2)           <---------ARR11(3)                <---------GLK1(2)   <---------ALFIN1 ->LBD16       <----------DOF2   --------->ARR11(3)  <------MYB46(1) <-------TEIL--------->ANAC58<--- ---TEIL      *TSS               --------->GLK1(2)   <------MYB83  <---------ARR14(2) ----------->HVH21   catcgaacattccacttctttcttcttgtctgaaaaatctagaagagcagctatttggtttctctatccgattcgtctctctcacgccctcacgtttatc  1919300                                              --------->YAB1               --------->ANAC46              <---------ATHB12               ------>MYB46(1)           --------->MYB46(3)             --------->AtMYB61         <-----------GT1       ------>ZmHOX2a(1)            <---------ANAC55(2)      --------->TOE2(3)             --------->ANAC55(2) -------->AtMYB61       <---------ARR11(3)  ------>MYB83                                 <------NtERF2 ------->bZIP60(2)      --------->ARR11(3) --------->WOX13(1)                          <---------ANAC58 ------->ANAC46------>MYB83  <----------DOF2------>MYB46(1)                            <---------ANAC46 -----GT1  >>>>>>>>>>MYB80   --------------->AGL15                             <-----------HVH21 ------ALFIN1<---------MYB59 <---------------AGL15                  <---------ZAT14    <---------ANAC58   cacctcatcctcaaaccaaaccacaagacctcttttttaagtaaccaatcacagagagatagagagagagaacagagtcaatgtcaatggcgtctatagc  1919400  Previous    Next  AGI:  At5g06280.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN67410.1) Range:  from: 1917642    to: 1918888    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g06290.1    Description:  2-cys peroxiredoxin, chloroplast, putative. Identical to 2-Cys peroxiredoxin BAS1-like, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9C5R8;GB:Q9FED5;GB:Q9FNH9); similar to 2-cys peroxiredoxin, chloroplast (BAS1) [Arabidopsis thaliana] (TAIR:AT3G11630.1); similar to 2-Cys peroxiredoxin [Brassica napus] (GB:AAG30570.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 1919214    to: 1921426    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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