Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ZAT2          <---------ZAT2          <---------At4g35610          --------->At4g35610    --------->CCA1(2)   --------->ARR14(2)   <---------ARR14(2)   <---------GLK1(2) --------ANAC58 --------ANAC58          <---------ATHB12                                 <---------AHL20(1) --->CCA1(2)      --------->ZAT2                     --------->RAP2.6(3)<---------YAB1 ----GLK1(1)      --------->At4g35610              xxxxxxxxxxxxxxxx>smallRNA(i)      --------->AHL20(2) -->ARR14(2)      <---------ZAT2                   <---------ARR14(2)   --------->ICU4 ---ARR11(3)      <---------At4g35610  <-----------TGA1            ----------->GT1  <---------ICU4 ---ARR14(2)  --------->DEAR3(1)       <-----------HVH21      ------>ZmHOX2a(1) --------->AHL20(2) -->ARR11(3) --------->ANAC58         <---------ANAC58  <---------At4g35610<---------YAB1  <---------AHL20(2) -->ARR11(1) --------->ANAC58         <---------ANAC58<---------RAP2.6(2) <---------AHL20(2) ---GLK1(2)<---------ALFIN1   --------->YAB1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------AHL20(2)  -   tgcgagatttgcagcaccgaagctgcaaacattcacgatttcgtcacattgcgatttcggcttcctcgagagttattattttttaatttttatatttttg  1819700                                                    <-----------GT1                                                   <---------YAB1        <----------DOF2                         <---------YAB1     <-----------GT1                        <---------ANAC58    <-----------GT1           <-----------RAV1(1)--------->YAB1  <---------YAB1          ----------->GT1 <---------ICU4       <---------AHL20(2)    <---------ANAC46 --------->At4g35610   --------->TOE2(3) -------->ICU4    <---------AHL20(2)        <---------ANAC58 <---------At4g35610 <---------AHL20(2)   taatttttatctttttctgtttatttttttttgtgttgtttcattttcgtattataactattcagatgtgattgtaaacttattttcttaaacgtgaaaa  1819800                                                              --------->AHL20(2)                                                     --------->ANAC55(2)                           --                                                     <---------ANAC55(2)                           <-                                                     <---------ANAC58                       ---------                                                     <---------ANAC58                   <--------HAHB4                                       <---------ICU4<---------ANAC46                   --------->YAB1        --------->YAB1    --------->DAG2             ----------->GT1                   <---------YAB1        --------->ANAC46  <---------TOE2(3)    <---------AHL20(2) <---------AHL20(2) --------------->AGL15        --------->ANAC55(2)----------->GT1  --------->TOE2(3) <---------AHL20(2)     <---------------AGL15   ttggatttatacataatgtgactgaaaaaaggttgaaaacatcatttcttaaattgcgtaaaatttatatttttaaaatttttaaaactataattagtta  1819900                                                                                                  ---                                                                                                <----                                   --------->AtMYB61                                            -----            --------->LBD16        <---------ALFIN1                                           <------           <---------ANAC46       --------->MYB46(3)                                --------->LBD16          ------>ZmHOX2a(2)       <---------MYB55(2)                               <---------ANAC55(2)         <------ZmHOX2a(2)      ------>NtERF2                                      --------->ANAC55(2)        --------->ARR14(2)     <---------ETT(1)                                    <---------ANAC58  -------->HAHB4               --------->DEAR3(1)                                  <---------ANAC58 -  <--------ATHB1               ----------->HVH21                                   <---------ANAC46 <  <---------ICU4              --------->DEAR3(2)                           <-----------ARR10--------- <---------ATHB51          <---------At4g35610                             ------->TEIL   --------->AHL20(2) --------->ICU4            --------->At4g35610                             --------->GLK1(2)<-------- <---------YAB1          --------->ZAT18                                   <---------ARR11(1) ------- ------->YAB1            <---------ZAT18                                --------->ANAC46 <---------AHL20(1) --------ICU4       <---------MYB52(1) --------->At5g28300            <-----------GT1    --------->AHL20(1) -->GT1 <---------ARR14(2) <------NtERF2                        ----------->GT1    ----------->GT1<--   ataataattcgatccgtagacggtttgtccgctccgaccaccgtaacaattcaaaaccgaagaaaattgtttatacgaatctattccgtaatatatatat  1820000                                                                                                  ---                                                                                                  ---             <---------AHL20(1)                                                                   <--        --------->AHL20(2)                                                                     <-----        <---------AHL20(2)                                                                     ------      <---------AHL20(2)                                                                       <-----      --------->AHL20(2)                                                                     --------    <---------AHL20(2)                                                                       --------    --------->AHL20(2)                                                                       <-------  <---------AHL20(2)     --------->HSFC1(2)                                                --------->AHL20(2)  --------->AHL20(2)     <---------HSFB2a(1)                                               <---------AHL20(2) ------>AHL20(2)         <---------HSFC1(2)                                                ---------- -----AHL20(2)   --------->YAB1                                                        ----------->TBP ---->AHL20(2)  <---------AHL20(2)                                                     --------->AHL20(2) ---AHL20(2) --------->AHL20(1)                                                       <---------ARR11(3) -------->AHL20(2)       --------->HSFB2a(1)                     --------->ANAC46     <---------AHL20(1) ---------AHL20(2) <---------YAB1                              ---------->DOF2        --------->AHL20(1) >AHL20(2)--------->AHL20(2)                               --------->YAB1        ------------>CBF<--- -AHL20(2)<---------AHL20(2)                              <---------YAB1--------->ANAC58 <---------AHL20(2) -->AHL20(2)<---------AHL20(2)                     <---------AHL20(2)   --------->ANAC46 ----------->TBP -------AHL20(2)<---------YAB1<----------DOF2     --------->AHL20(2)    --------->ANAC58 --------->AHL20(2)   atatatatatatatatatattataagaaatttctttttaaaaaactaatccatttaatctataataaaagtcactcgccattcgacaatatatatatata  1820100                                 *TSS                                --------->LBD16     <<<<<<<<<TBF1             --------->LBD16 ------>AHL20(1)               <---------LBD16 ------>ARR11(3)              <---------ANAC46 -------ARR11(3)              <---------LBD16 ------TBP                   <---------LBD16 --->AHL20(2)              <---------ARR14(2) ----AHL20(2)             <---------GLK1(1) --->TBP--------->ZAT14   --------->GLK1(1)                                                        -- ->AHL20(2)              <---------ARR14(2)                    ---------->DOF2                     <- --AHL20(2)              --------->ARR14(2)          <---------At4g35610   <---------At4g35610   ---- ->TBP  <---------ZAT14 <------ZmHOX2a(1)        <---------WRKY18(1)   --------->ICU4         <------ ------AHL20(2)       <---------TOE2(3)---------->DOF2    <---------WOX13(1)             <---------At4g35610   tatattcttcttcactgccagtctgaggatttccggggaaataaagaaacttgactgctaattgctaaaggtaatgcttctgagaattggaagctaatga  1820200                                                     <----------DOF2                                                     --------------------->WRI1                                                  ------>NtERF2                                                  --------->LBD16                                                 --------->ANAC46                                                <---------LBD16                                              ------>ZmHOX2a(2)                                             <---------GLK1(1)                                             --------->GLK1(1)          <---------ANAC58                                             <------ZmHOX2a(2)          <---------ANAC46                                            --------->ARR14(3)          <---------ANAC58                                            <---------ARR14(3)       <---------MYB52(1)        <-----      ------>ZmHOX2a(1)                     <---------AGP1          <-------GAMYB           ---------     --------->TOE2(3)                      <---------ARR14(2)  ===========================HOX2a_HOX2a ------->ARR11(3)  --------->At4g35610      --------->ARR14(2)  ------>ZmHOX2a(2)          --------->ICU4 --------ARR11(3)  <---------At4g35610      --------->ARR11(3) <---------GLK1(1)          --------->ANAC58 --->TEIL     --------->WOX13(1)            <---------ARR11(3)--------->ARR11(3)          --------->ANAC58 ---ATHB12 --------->YAB1<---------GLK1(2)  <-----------ARR10 <---------ARR11(3)    ------>ZmHOX2a(1)   agctcttcctcaatagcaatctgctcagaaactctattttcttcaagatctccgcctttgttttgatctccgttgcttgtttcttcctcggtaagcattg  1820300                                                 <------ZmHOX2a(2)                 ------>NtERF2                --------->LBD16                 <-----------HVH21           --------->HSFB2a(2)                --------->RAP2.3(2)          <---------HSFB2a(2)                --------->DEAR3(1)      --------->HSFB2a(1)                --------->RAP2.3(3)     <---------HSFB2a(1)               --------->RAP2.3(1)      <---------HSFC1(2)               --------->ORA47(2)       --------->HSFC1(2)    <---------ALFIN1              --------->LBD16        ------>NtERF2           <---------ZAT18           <---------ATERF1(1)      --------->DEAR3(1)   <-----------RAV1(1)          <---------SPL7           <----------CDC5------>ZmHOX2a(2)         <---------ANAC58         --------->LBD16--------->GLK1(1)           <---------LBD16    <------ZmHOX2a(1)             ------>NtERF2 --------->ARR14(2)    ----------->RAV1(2)  <---------TOE2(3)              --------->DEAR3(1)      =========================RAV ----AtMYB61  ------>NtERF2      --------->ANAC46<---------GLK1(1)    --------->At4g35610     ------- >ATHB12 <---------ANAC58       <---------LBD16 <---------ARR14(2)    <---------At4g35610     <------   gtctgaggatggcttccgccgtctcatcttcttctccgccgagccttcccgatctcccattgtcgcactctcacctgatttcggaaaaacctataacatc  1820400                                                             <---------GLK1(2)                                                         <------NtERF2                                                        ------>NtERF2                                                        ----------->RAV1(1)                                                       --------->RRTF1(3)                                                       --------->DREB2C(2)                                                       --------->RRTF1(2)                                                       --------->RAP2.3(3)                                                       --------->RAP2.3(2)                                                       --------->DEAR3(1)                                                       <---------ATERF1(2)                                                       --------->RAP2.6(2)                                                       --------->ATERF1(2)                                                       --------->ANAC46                                                      --------->DEAR4(2)                                                      --------->RAP2.3(1)                                                      --------->ORA47(2)                                                      --------->ERF1                                                      --------->ATERF1(1)                                                      --------->RRTF1(1)                                                      <------NtERF2                                                      --------->RAP2.6(1)                                                     --------->ABI4(1)                                                     <---------DEAR4(2)                                                     --------->At4g35610                                                     <---------At4g35610                                                     <---------DREB2C(1)                                                     <---------RAP2.3(1)                                                     <---------ATERF1(1)                                                    --------->RAP2.3(3)                                                    --------->RAP2.6(2)                                                    --------->RRTF1(3)                                                    --------->ATERF1(2)                                                    --------->RAP2.3(2)                                                    --------->RRTF1(2)                                                    --------->DEAR3(1)                                                    <---------ATERF1(2)                                                    <---------DEAR3(1)                                                    <---------ALFIN1                                                    --------->ANAC46                                                   --------->RRTF1(1)                                                   --------->RAP2.6(1)                                                   --------->ATERF1(1)                                                   --------->DEAR4(2)                                                   --------->ERF1                                                   --------->ORA47(2)                                                   --------->RAP2.3(1)                                                  --------->ABI4(1)                                                  <---------ATERF1(1)                                                  ------>NtERF2                                                 <---------ALFIN1                                                 --------->AtMYB61                                                 ------->GAMYB                                                 --------->ANAC46                                                 --------->DREB2C(2)                                                 --------->DEAR3(1)                                                --------->MYB46(3)                                               --------->ABI4(1)                                              --------->AtMYB61                                           <-----------GT1   --------->ARR14(2)                                      <----------DOF2------>NtERF2    <---------ANAC46             --                                ------>NtERF2--------->MYB46(3)    <---------MYB52(1)      <---------MYB52(1)                        <---------GLK1(2)<-----------HVH21   <---------ARR14(2)            --------->DOF5.7(2)        ------>ZmHOX2a(2)     <---------ANAC58<---------ALFIN1--------->GLK1(2)           --------->TOE2(3) -->ARR11(3)    <-----------HVH21     --------------------->WRI1  <-------GAMYB--------->ALFIN1 ----- ---ARR11(3)--------->YAB1    <---------ANAC58--------->DEAR3(1) <-----------RAV1(1)     ----------->GT1   tctggtttgatctatgagagtcacccgattttgcctccgtctttgtcaccaccgccgccgccagattctgttgagttgaaggtgtttggaatcgttaatg  1820500                                                           <---------MYB52(1)                                                           --------->ALFIN1                                                         <---------O2                                                         <---------TGA1a                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                     --------->ATERF1(1)                                                     <------NtERF2                                                    --------->LBD16                                                    <---------ATERF1(1)                                                   <---------ANAC46                                                   <---------DEAR3(1)                                                  <---------LBD16                                                  <------NtERF2                                                  --------->At4g35610                                                  <---------At4g35610                                <---------MYB46(3)--------->ATERF1(1)                             <------MYB46(1)     <---------RAP2.3(1)                               --              <---------At4g35610                <---------ORA47(2)                                <- --------->ANAC58            ----------->GT1    <---------RAP2.3(3)         --------->GLK1(1)     --- --------->ANAC58            <------MYB83       <---------DEAR3(1)      --------->ANAC46         <--- ------->MYB52(1)          <---------WOX13(1)   <---------DREB2C(2)     --------->ANAC58    ------>NtERF2 ---->YAB1    --------->At4g35610              --------->ATERF1(1)      --------->ANAC58   --------->DEAR3(1)   agaacggaacaatgtctgatgagtttcagattggtgattacgacgttgagtcggcggagacgttggggaatcagacggaattcgagagtagcgacgacga  1820600  Previous    Next  AGI:  At5g06050.1    Description:  dehydration-responsive protein-related. similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT2G39750.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G77260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61931.1); similar to hypothetical protein OsJ_003963 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69144.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159) Range:  from: 1820133    to: 1823772    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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