Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ------>ZmHOX2a(1)     <---------------AGL15                                             <---------GLK1(1)     --------------->AGL15                                         <---------WOX13(1)    <-----------------AGL1                                       --------->ATHB12    ----------------->AGL1                                       <--------ATHB1    ----------------->AGL2                                      --------->ICU4    <-----------------AG                                        <---------YAB1    ----------------->AG                                       <---------WOX13(1)    ----------------->AGL3                                --------->ZAT2    <-----------------AGL3                                --------->At4g35610    <---------ZAT14 ------------->AtSPL8                                     <---------At4g35610    --------->ZAT14 --------GT1                                     --------->At4g35610   --------->GLK1(1) ---DOF2                                         <---------At4g35610 --------->ATHB12 --DAG2                   <-----------GT1 <---------ANAC46<---------ZAT2    ------>ZmHOX2a(1)       <   ctctgttcctcatttggatagagttttttcacttgtttatagttttgtgtcttctgactaagctgaatgattgatttcctctgtatactatcccattccc  1789800               --------------------->WRI1               <----------DOF2          <---------At4g35610         <---------ARR14(2)         --------->ARR14(2)      --------->HSFB2a(2)                                                         <------ZmHOX2a(2)      <---------HSFB2a(2)                                                        <---------ARR11(3)     <---------LBD16                                                             <---------AGP1    <---------LBD16                                                              --------->ARR11(3) <---------ARR11(3)                                              --------->ARR14(2) --------->ARR11(3)                                              <---------ARR14(2)------>ZmHOX2a(2) <---------ARR14(2)       <---------ICU4           <------ZmHOX2a(1)            <---------CCA1(2) --------->ARR14(2)       --------->ATHB51   <----------DOF2---------->DOF2--------->ARR11(3)    ---- ---------CCA1(2)      --------->YAB1--------->AHL20(2)----------->GT1    <---------CCA1(2)    <-----   acatatctcgggaactgctttgtatgcataattgtatgaaaaaatagctttgaggactggagaaaaggaacctgatatatctagatctcatgaggtgatc  1789900                                                  <---------DAG2                                                  <----------DOF2                         --------->RVE1(1)                                                <---------HSFC1(2)                        <----------         <---------At4g35610               <---------HSFB2a(2)                    ----------->GT1   <     <-----------GT1                       --------->HSFB2a(2)                    <---------ANAC55(2) ------->GT1              <-------TEIL  <----------DOF2 <----------DOF2           --------->AtLEC2  < ----YAB1--------->At4g35610    <-----------GT1 --------->HSFC1(2)            <-----------HVH21 <----   agtgaattttcagcttaaaacttgaaggctcataaaaccatacttttggaagctttttctttggtttatgctattacatttgtcatgtaaaaatacctct  1790000                         --------->At4g35610                     <---------YAB1                    --------->ATHB12                            --------->AHL20(2) <----------DOF2    -------->HAHB4                      <----------DOF2 -GT1               <---------ICU4               --------->ARR11(3) ---------ANAC58   <---------ATHB12              <---------ARR11(3)          ------->TEIL ---------ANAC58   --------->ICU4           <------NtERF2       <---------AHL20(2)                  - ------DOF2   <-------TEIL          ---------->DOF2------>ZmHOX2a(2)       <---------ZAT18 ----------   ttgctttcttcaaaggttcaaatgattagcttagagactaaagggcagcatgatcttactttagattaaaatagctatgcacttagaggctcttaatgcg  1790100               --------->ICU4            --------->AHL20(2)                                                       ------------>CBF     <---------ANAC55(2)                                                            ------>ZmHOX2a(1)     <---------ANAC46                                                             ----------->RAV1(2)     <------MYB83                                                                ------>ZmHOX2a(1)     <------MYB46(1)                                                         --------->ARR14(2)    --------->MYB59                                                          <---------ARR14(2)    --------->MYB46(2)                              --------->ALFIN1   ------>ZmHOX2a(1)      <------    --------->MYB111(1)     <---------MYB52(1)      <---------ANAC46 ======================HOX2a_HOX2a -------->ATHB12<-----------GT1          --------->ZAT6              ===================HOX2a_HOX2a >DOF2    ----------->GT1  <----------DOF2        <---------ANAC46   ------>ZmHOX2a(2)        <------   actgattaggtgaagtaattactatgttcctttagtgcttcttccactacttctgtgtggaatttctctgatccttccaaatcctcctgcaatttcagtt  1790200               --------->HSFB2a(2)               --------------->AGL15               <---------------AGL15               <---------HSFB2a(2)               --------->ANAC55(2)               <---------ANAC55(2)              ----------------->AGL1              ----------------->AGL2         <---------TOE2(2)         <---------TOE1(2)      *TSS                      <---------GLK1(1)                       ---         <---------TOE2(3)  --------->ARR14(2)            --------->GLK1(1)                <---------ZAT14 ---At4g35610 ----------------->AGL3          --------->ANAC58                         ------>ZmHOX2a(1) -GAMYB  --------->MYB59    <---------ARR14(2)--------->ANAC58 <---------TOE2(2)    ------>ZmHOX2a(1)   gctataaaacttaggttccataactagtagtatatgcatcaactcatcactcaagaatggaaacccatgttttatctcgcattttcctcctagttctctg  1790300                                                                                                   --                                                     <---------HSFB2a(2)                           --                                                   ------>ZmHOX2a(1)                          <------NtERF2                                               --------->ARR14(2)     --------->DAG2          -------                                              --------->GLK1(1)      ---------->DOF2          <------                                       --------->ALFIN1        --------->ANAC58               -------       --------->TOE1(3)             <-----------RAV1(1)     ---------->DOF2         <---------ZAT14       --------->TOE2(3)<-----------RAV1(1)   <---------GLK1(1)--------->ANAC58      --------->ZAT18 ---->TEIL---------->DOF2           --------->GLK1(2)--------->HSFB2a(2)        <---------ANAC46   --   catctacagccttaaaaccatggtttatggggctggagaatgtgggagaaatcctccagacagagaagccataaagttggctccttgtgcaatggctgca  1790400      <---------At4g35610                                                                   <-------- ------->ANAC46                                                               <-----------HVH21 ------->ANAC58                                                              <---------bZIP60(1) -->At4g35610        <---------At4g35610                                   --------->At4g35610 ---ZAT14   ---------->DOF2                               --------->GLK1(2)<---------At4g35610  <---- -->ZAT18--------->At4g35610                              --------->ARR14(2) --------->bZIP60(1)----- ------->ANAC58  <-----------HVH21               --------->ALFIN1     <----------DOF2<----------DOF2   caagacacatctgctaaagtgtcagcaatttgctgtgctcgagtgaaacagatggggcagaatccaaaatgcctttgtgctgtcatgctttcttccacag  1790500                                                                        <-------GAMYB                                                                       ----------->GT1               --------->ANAC58                                        <---------MYB46(3)      <---------LBD16    ======================HOX2a_HOX2a             <---------DEAR3(2)   <---------At4g35610   ------>ZmHOX2a(2)                            <---------DEAR3(1)   --------->ZAT2       =======================HOX2a_HOX2a          ------------>AtMYB77   <---------ZAT2       <------ZmHOX2a(2)                           <-----------HVH21   --------->At4g35610 <---------ARR11(3)                          --------->TGA1a   --------->GLK1(1)   --------->ARR11(3)                          <---------TGA1a   <---------GLK1(1)  --------->GLK1(1)                            --------->O2 ===============================HOX2a_HOX2a       ----------->RAV1(1)<---------MYB52(1) ==============================HOX2a_HOX2a  --------->ANAC46       <---------O2 <------ZmHOX2a(1)    <---------GLK1(1)   ===================================bZIP_DOF -ALFIN1--------->LBD16--------->ARR14(3) ---------->DOF2          ================================== -----ZAT2     --------->ANAC58         ------>ZmHOX2a(1)          =============MYC_MYB ---->ZAT2   ---------->DOF2           --------->TOE2(3)       <-----------HVH21  --------->ALFIN1 --   ctaggagctccggagcaaagccagagatctcgatgactattcctaaacgctgcaacatcgctaatcgtcccgtcggttacaaatgtggaggtaatgacat  1790600                                                                                                -----                                                                                                -----                                                                                          ---------->DOF2            <----------DOF2   --------->ZAT2                                           <---------ANAC46            <---------DAG2    <---------ZAT2                                           <---------ANAC58         <---------AHL20(2)   --------->At4g35610                                      <---------ANAC58         <-----------GT1      <---------At4g35610                         <---------At4g35610   <---- =========bZIP_DOF     --------->ATHB12   <---------ANAC58      ---------->ID1       ------>NtERF2 -------->DOF2        <---------AHL20(2)  <---------ANAC58<-----------GT1 --------->At4g35610  ------   aaaaagcttattaactttttctatttcattgcagctgcaattttgcttatcaaatgtttttaacttgttctcttgcagcttatactctgccttgaagcag  1790700  Previous    Next  AGI:  At5g05960.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G53980.2); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G53980.1); similar to hypothetical protein [Plantago major] (GB:CAH59408.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140) Range:  from: 1790232    to: 1790834    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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