Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------ZmHOX2a(2)    <------MYB83  <--------P  --------->ALFIN1 <-------GAMYB ---------MYB46(3)                                                                                  - ----ZmHOX2a(1)                                                                                     - ------RAV1(2)                                                            ----------->GT1          <- ----HSFB2a(2)                                                    <------MYB83  ---------->DOF2 <---- --->HSFB2a(2)            <---------ARR14(2)          <---------GLK1(1)  <---------WOX13(1)     ----- ->MYB52(1)               <---------ARR11(3)         <XXXXXXXXXXXXXXXXXXXXMIR2938            -------- >P <------MYB46(1)       --------->ARR14(2)   --------->ATHB12   <------MYB46(1)--------->DAG2 <----   ggaggttgggatcaaatgctgaattcaagatttgttagcgatatttggaagattggaattcacttggaaggtcggattgaaaaaaaggagattgagaaag  1767200                                      <---------ANAC58                                      <---------ANAC58       <-------GAMYB                  <---------ANAC46                            <---------WRKY12 ---------->HVH21                    <-------TEIL                                --------->WRKY18(1) -------->ALFIN1                    --------->CCA1(2)                  <---------HSFB2a(2) ----------HVH21                   --------->ARR11(1)      ---------->DOF2 <---------GLK1(1) -----ZAT2                         <---------GLK1(2)     --------->HSFB2a(2)    <--------ZAP1 ---->At4g35610                    --------->ARR14(2)    <---------YAB1--------->HSFB2a(2)          < -->DOF2          ---------->DOF2----------->ARR10---------->DOF2 <---------AtMYB61            <----- -----At4g35610  <------ZmHOX2a(1) <---------ARR14(2)    <---------HSFB2a(2)    <-----------HVH21  <-   ctgtgagggtgttaatggaggaaagtgaaggaaataagattcgtgagagaatgaaagttctgaaagatgaggtcgagaaatcggtcaaacaaggaggctc  1767300                                                                                 <---------------AGL15                                                                                 --------------->AGL15                                                                  <---------ARR11(3)              ---                                                                  --------->ARR11(3)--------->AHL20(2)                                                              ---------->DOF2    <---------HSFB2a(2)-     --------->WOX13(1)                                --------->ARR14(2)        --------->HSFB2a(2)- ----------DOF2             --------->YAB1             <---------ARR14(2)       ----------------->AGL3 --TEIL                    <---------ATHB12          <---------KAN4(2)--------->TOE2(3)      -------- --------ICU4    --------->GLK1(2)   <---------YAB1  ----------->ARR10--------->TOE1(3) ----------->GT1   atcttttcaatctattgagactctagctaatcatatactattgttgtaagttgggaatatttgctaaagatacctcaacgtttctataaattgcaaaaag  1767400                     <---------MYB52(1)           --------->AHL20(1)                                               --------->YAB1           <---------AHL20(1)                                       <-----------GT1           <------           <---------AHL20(2)                    --------->DAG2    <---------YAB1        <---------MYB46(3) ------->DOF2       <-------GAMYB               ---------->DOF2 --------->AHL20(2)    <---------ANAC58 -------->ANAC58   <---------MYB46(3)  <---------ATHB12         --------->AHL20(1)    <---------ANAC46 -------->ANAC58   <-----------RAV1(1)------>MYB83              <---------AHL20(1)    <---------ANAC58 -->DOF2  --------->AHL20(2)          ------>MYB46(1)           <---------AHL20(2)   --------->ATHB12   aaaagcacttgattatattgtctgttgtctaaaacaaaccaaacattcaaaaaagctcattgctattttattactgaatcaaaaacttgagtggtttcac  1767500                                             --------->ZAT14                                             --------->ZAT18                                <-----------HVH21                             <---------ANAC55(2)                             <---------ANAC58<-------TEIL  --------->TOE2(3)                             --------->ANAC55(2)     <-----------GT1          --------->MYB55(2)             <----------ID1  <---------ANAC55(1)   <-----------HVH21          <---------MYB46(3)             ----------->GT1 <---------ANAC46<---------ZAT14                 <---------AtMYB61   ---- -----GT1  ---------->DOF2   <---------ANAC58<---------ZAT18   ------------>CBF        <------------CBF   ttgtcatcaccaaaaaagaaaaaaaaacatttcgtgtcatagtcaagtacacttgtcactgccttagcaatgtaggccagtggttgtcttattgaataga  1767600                        <----------DOF2                       <---------ANAC58                       <---------ANAC58              <------------CBF             <---------ICU4             --------->YAB1             --------->ATHB12            ----------->GT1            <---------YAB1              *TSS  <---------AHL20(2)           <---------ARR11(3)          ---------->DOF2       <------ZmHOX2a(1) <---------AtLEC2    -- ----->ANAC46-------->ATHB1  <---------At4g35610     ---------->DOF2---------->DOF2         ---------   ctccattctccaaaatcattgttttgctttctgcagataagaaaagaaaaaattgcaaagagaggaagaacaaagaaacttgaatggagaagagaaacga  1767700                                                                    <----------DOF2                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                                <---------ARR11(3)                                                                <---------GLK1(2)                                                                --------->ARR11(3)                                                              ----------->ARR10                                                            ---------->DOF2                                                         --------->ANAC58               <-----------GT1                           --------->ANAC58   <---------ANAC55(2)                                --------->ZAT2------>ZmHOX2a(1)   --------->ANAC55(2)                                --------->At4g35610                           < ------->CCA1(2)  ------>ZmHOX2a(1)                   <---------ZAT2============================HOX2a_HOX2a >CCA1(2)  <----------DOF2                            <---------At4g35610                <------ZmHOX2a(2)   gagacaagtgattctttttcctctaccattacaaggttgcataaaccctatgcttcagctagcaaagatcctttactcaagaggtttttcgatcaccatc  1767800                                                                     <----------DOF2                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                  ------>NtERF2               ------->GAMYB          ------>ZmHOX2a(1)          <---------DEAR3(1)         <----------DOF2           ------>MYB83                 --------->RAP2.6(3)     ------->MYC2      <-----------ARR10                       ------>NtERF2     <-------MYC2      <---------ARR11(1)                      <---------ATERF1(1)     ------->MYC3      --------->ARR14(2)                    --------->LBD16     <-------MYC3      <---------ARR14(2)                   --------->ANAC46                        <    --------->ANAC58   --------->ARR11(3)                  <---------LBD16                         --    --------->ANAC58   <---------ARR11(3)                --------->ARR14(2)                      ----    --------->ANAC46  <---------CCA1(2)        <----------DOF2----------->HVH21                  <---  <---------ALFIN1<------NtERF2    ------>MYB46(1)       <---------ARR14(2)  ------->TEIL    <------- ---------ALFIN1 ------>NtERF2   --------->AtMYB61      <---------GLK1(1)   <---------GLK1(2)--------   atccacacgcgcttcaacgcgcccaaatcttcagaccatcctctcttcactttcttacaaatccgcgacggcttgtctgaatctcagactcaatctcgtg  1767900           <---------MYB52(2)                                                                      <-          --------->At4g35610           ------>ZmHOX2a(2)                                          --          <---------At4g35610          <------ZmHOX2a(2)                                          <--        --------->REM1(1)             --------->ARR14(2)                                  <------ZmHOX2a(1) ----------DOF2                       <---------ARR14(2)                               <---------LBD16 ---->ZmHOX2a(2)          ----------->RAV1(1)                                         <-------TEIL=== ----->ARR11(3)--------->ANAC46      --------->At4g35610                             --------->GLK1(2) ------ARR11(3)--------->ANAC58      <---------At4g35610                            <---------GLK1(2) --ANAC55(2)   --------->ANAC58  <-----------HVH21                                  --------->ARR14(2) ->ANAC55(2)------->GAMYB--------->MYB46(3)     --------->HSFB2a(2)                 <---------ARR14(2)   atcttttgcttcaactcacgcttctcaacaacaattgtcagatcccatttcgagagtgtttggctaaactcattaaacctagttcagattcaggaacaga  1768000                                                          <------NtERF2                                                        <---------ANAC58                                    <------MYB46(1)     <---------ANAC58                                    <------MYB83        <---------ANAC46                                    <---------ANAC46   <------NtERF2                                   <------MYB83        <---------LBD16                                 <---------MYB52(1)  <---------DEAR3(1)                             <---------LBD16         --------->ALFIN1           <---------At4g35610   <--------P          ----------->HVH21           --------->At4g35610  <-------GAMYB       --------->LBD16   <------ZmHOX2a(1)     --------->HSFC1(2)     --------->GLK1(2)   =========================HOX2a_HOX2a         --------->ARR14(2)  ----------->GT1        --------->HSFB2a(1)--------->ANAC58 ----------->GT1        <---------YAB1      --------->ANAC58 --------ARR14(2)    ------>ZmHOX2a(2)      --------->ANAC46 ----------->GT1 ------->ARR14(2)----------->HVH21 <------MYB46(1) <---------ANAC58                   ------>ZmHOX2a(1) ----ZmHOX2a(1)<---------ANAC46 <---------MYB52(1) <---------ANAC58<-----------GT1 ---------->ID1   - ===========================HOX2a_HOX2a   <-----------GT1--------->LBD16   ------>ZmHOX2a(1)        <   ggataggaaaattagctgtgtgatcgatgattccggttgggttttcacacaatccgtggcggagagttttaatcttcctcgatttgtcctctgtgcttat  1768100  Previous    Next  AGI:  At5g05860.1    Description:  UGT76C2 (UDP-glucosyl transferase 76C2); UDP-glycosyltransferase/ transferase, transferring glycosyl groups. Identical to Cytokinin-N-glucosyltransferase 2 (UGT76C2) [Arabidopsis Thaliana] (GB:Q9FIA0); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69089.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 1765508    to: 1767456    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g05870.1    Description:  UGT76C1 (UDP-GLUCOSYL TRANSFERASE 76C1); UDP-glycosyltransferase/ transferase, transferring glycosyl groups. Identical to Cytokinin-N-glucosyltransferase 1 (UGT76C1) [Arabidopsis Thaliana] (GB:Q9FI99); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT5G05880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69089.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 1767640    to: 1769263    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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