Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ATHB12                              <---------YAB1                                       <---------YAB1                                <---------AHL20(2)                                      <---------TOE2(3)                              <---------AHL20(1)                                     --------->YAB1                                  --------->AHL20(2)                                    --------->ICU4                                   --------->AHL20(1)                                <-------TEIL                                        --------->AHL20(2)                --------->DAG2 --------->ANAC58                                     --------->YAB1      <---------YAB1           --------->ANAC58                               --------->ANAC58 --------DOF2  ---------->DOF2 --------->AtLEC2              <-------GAMYB    --------->ANAC58   <---   ctttagttttgatagagaaaagggctaagagacatgcattgatgatttgattctagtttatgctgttatcgactctgtgctagccattatatttgtttag  1746400                      <---------HSFB2a(1)                      --------->HSFB2a(1)                      --------->HSFC1(2)                      <---------HSFC1(2)                                    <---------AHL20(2)                  --------->ANAC58                  <---------ICU4         --------->AHL20(2)                  --------->ANAC58                  --------->ATHB12       <---------AHL20(2)                 --------->SPL7                    <---------YAB1         <---------AHL20(2)             <---------------AtSPL3                --------->ICU4      --------->AHL20(1)             --------------->AtSPL3              --------->YAB1        <---------ARR11(3)          --------->YAB1                       --------->ARR11(3)      <---------AHL20(1)          <-         <---------YAB1                       <---------GLK1(1)        --------->AHL20(2)         ---      <---------AHL20(2)                     <---------ARR11(3)       <---------CCA1(2)<---------TOE2(3) ------ZAT6  <---------ICU4                  --------->ARR11(3) ---------->ID1        --------->YAB1   agtcagaatttatgatcagtacgaaaattccaaaaacaatttctatagatatcatcattgatatgtgtccctatatattaatttccattaatgaattcaa  1746500                     <-------GAMYB                    --------->MYB52(2)                    <---------MYB46(3)                    <------MYB83          --------->AHL20(2) --------->YAB1     --------->AHL20(2)  <---------YAB1                                                             < --------AHL20(2)   <------MYB46(1)                                 ---------->DOF2           ------- ------>AHL20(2)<-----------RAV1(1)   ------>ZmHOX2a(1)      ---------->DOF2      --------->ICU4  ---   tttaaaatgaaataaaaaatgttggttactatagtagttcctaaaatcaaatttgtaaggcatgaaagatgaaagaagggagtcatgtttttaatgcatc  1746600    ---------->ID1                  --------->YAB1 ----------DOF2                  --------->YAB1 >TEIL ------>ZmHOX2a(1)<----------DOF2<-----------GT1    <---------ALFIN1      <---------MYB52(1) --->ZmHOX2a(1)<----------DOF2<----------DOF2      <---------CCA1(2)---------->DOF2    <xxxxxxxxxxxxx   ctctttgtcctcattcactttgttttctttcccttttataaaaacctctctccctatctcacacactcacaaaagtgtctcccttattttcaggcacttc  1746700                <---------AHL20(2)                --------->AHL20(2)                --------->AHL20(1)         --------->ANAC46         --------->ANAC58         --------->ANAC58                                            --------->ANAC58       --------->CCA1(2)                          <----------DOF2    --------->ANAC46  <---------ANAC58 <---------AHL20(2)                       --------->ARR11(3)         --------->ANAC58  --------->TOE2(3) --------->AHL20(2)  <-----------GT1      <---------ARR11(3)       ---------->DOF2     <---------ANAC58 xxxxxxxxxxsmallRNA(le3)              ---------->DOF2            <----------DOF2  <<<<<<<<<TBF1   aaaataaatatacgaaaataaaataaccatttcttaagtctaaagaccttctctttcaactagaagcctttaagccatgtcttcttcttccttgatactt  1746800                                                          <---------YAB1                                                         <-------GAMYB                                                        ----------->GT1                                                        <---------MYB46(3)                                                       <--------P                                                       <---------MYB55(1)          --------->ABI4(1)                                                      <-------GAMYB               --------->DREB2C(2)                                                     <---------MYB46(3)           ------->GAMYB                                                     <---------DEAR3(2)           --------->DEAR4(1)                                                     --------->MYB55(2)           --------->ANAC58                                                    <---------DEAR3(1)            --------->ANAC58                                                  ------------>AtMYB77            --------->RAP2.6(2)                                                 <---------TGA1a            --------->ANAC46                                                 ========================MYC_MYB  --------->ANAC46                                                 --------->TGA1a--------->MYB46(3)--------->DEAR3(1)                                                 --------->O2   <---------MYB111(2)------>NtERF2                                                 =============MYC_MYB    --------->ARR14(2)                                                 --------->ANAC46   --------->TOE2(3)                                                 --------->ANAC58 -------->P--------->ANAC58     <---                                                 ===============MYC_MYB  <---------ARR14(2)    ------                                                 --------->ANAC58------->GAMYB   --------->MYB46(3)                                                 =============MYC_MYB    <---------GLK1(2)    -------                                                 ===============MYC_MYB----------->ARR10      <------                               *TSS              ========================MYC_MYB<---------ATERF1(1)                  <----------DOF2            --------->YAB1   <-----------GT1  <---------ALFIN1------                  =========================================bZIP_DOF --------->TOE1(3)<---------ALFIN1      --------->ZAT14 ------------>CBF    --------->WOX13(1)  --------->YAB1--------->ANAC58------>ZmHOX2a(1)   ctcttctctactctctctctctttctcaatgtctcactcgcagacaatcacacggcggttgttataacaacctcagatactccaccgccacttcctccgc  1746900                 --------->ARR14(2)           --------->bZIP60(2)           --------->O2           --------->ANAC58         --------->DEAR3(1)       <-----------HVH21       --------->ABI4(1)       ------>NtERF2      --------->ANAC58      --------->DEAR3(1)      --------->DEAR4(1)      --------->DREB2C(2)      --------->ANAC46      --------->ANAC58                                <---------MYB52(1)<---------ANAC46      --------->RAP2.6(2)                  <---------ARR14(2)           <---------ANAC58      ------->GAMYB                        <---------GLK1(2)      ------>ZmHOX2a(1)     --------->MYB46(3)                    --------->ARR14(2) <---------SPL7    <---------ATERF1(1)                  --------->LBD16      <---------RAP2.6(3)   <---------ALFIN1                     --------->LBD16       ------>NtERF2 ------DAG2--------->ANAC46             --------->ANAC46      --------->ORA47(1) --->LBD16 --------->ANAC58             --------->ANAC58     --------->DEAR3(1) -->DEAR3(1)     <---------ARR14(2)     --------->ANAC58<---------DOF5.7(2) ---ALFIN1------>NtERF2                <---------LBD16--------->DOF5.7(2)    <-----------GT1 <------- >NtERF2 <---------ALFIN1    ------>ZmHOX2a(1)      <---------MYB46(3)  <---------ANAC58<----------DOF2   cttctccaccgccacggcataacttcacttcctctctcatgcccggaatcgcagtcgttatcgccgtcctcactgcgtttttctctctcactttcttact  1747000                                                      --------->LBD16                                                     --------->ANAC58                                                     --------->ANAC58                                                     --------->ANAC46                                                    <---------MYB55(2)                                                    --------->MYB46(3)                                                   ------>MYB83                                             ---------->DOF2                                           --------->TOE2(3)                                          <---------ANAC55(2)                          --------->ARR11(3)                                          --------->ANAC55(2)                          --------->ARR14(2)                                        <---------DOF5.7(2)                            <---------ARR11(3)                                       --------->ARR14(2)                              <---------ARR14(2)                                       <---------ARR14(2)                    <-------TEIL                                   <------NtERF2   ------>MYB46(1)           <---------LBD16                              --------->ANAC58    --------->MYB52(1)        --------->ARR14(1)                              --------->ANAC58   <---------ALFIN1           --------->CCA1(2)                             --------->RAP2.6(3) --------->AtMYB61         <---------ARR14(2)                            --------->MYB52(1)  --------->MYB46(3)         --------->ARR14(2)       <-----------HVH21 --------->ANAC46 --------->ANAC46                 --------->ARR11(1)      --       --------->TOE2(3) --------->ANAC58 <---------ANAC46           --------->YAB1<------ZmHOX2a(1)      --------->ANAC46   --------->ANAC58<---------TOE2(3)        --------->WOX13(1)  <------ZmHOX2a(1)  ------>ZmHOX2a(1)   <----------ID1  --------->DOF5.7(2)<------NtERF2   ----------->ARR10       ---- ----GT1         --------->At5g28300<---------ANAC46<---------LBD16 <---------ATHB12 ----------->GT1<   tctcctctacgtcaaacactgtaaacgacgaaacggcagcgtttacgtaaaccacccgcagcgtttcgcaatcactagatacggaggaggatattacaac  1747100                                                                              --------->ZAT18                                                                              <-------TEIL                                                                              <---------ZAT18                                                                           <------MYB46(1)                                                                           <---------ANAC58                                                                           <------MYB83  ----------->HVH21                                                                           <---------ANAC46                                                        <----------DOF2    <---------ANAC58                                                       <---------ICU4     --------->MYB111(2)                                                     ------->TEIL         <---------AtMYB61                                                 <---------WOX13(1)       --------->MYB46(2)                                               --------->ATHB12           --------->MYB55(2)                                            <---------ANAC58              --------->MYB111(1)                                            <---------ANAC55(2)           <---------MYB46(3)                                            --------->ANAC55(2)         <---------MYB52(1)         <-                                            <---------ANAC46          --------->LBD16   <-----------HVH21    <------ZmHOX2a(1)       <---------LBD16 <---------ANAC58        <---------LBD16  <---------At4g35610 ------->ALFIN1 <------ZmHOX2a(1)        <-----------HVH21<-----------GT1 --------->MYB52(2)       <- --->GAMYB   <------ZmHOX2a(1)--------->LBD16--------->LBD16    <----------DOF2   =================== ---------MYB46(3) ----------->GT1       <---------MYB52(1)    <---------MYB52(1) ---------->DOF2  <-   ggtggaggagtagtaggaggaaggaaaaactccggtatagaccggtccgtgattgaatctttaccggttttccggtttggtgcattaagcggtcacaagg  1747200                                                                                                    <                                                                                                    <                                                                                                    -             <---------ANAC58                                                                       -             <---------ANAC46                                                                       <             --------->TGA1a                                                       <-------MYC3     -             <---------O2                                                          ------->PIF5     <             <---------ANAC58                                                      <-------MYC2     -             --------->O2                                                          ------->MYC4     -             <---------TGA1a                                                       <-------MYC4    >>             --------->DEAR3(1)                                                    <-------PIF5    >>         --------->ZAT14                          <---------TOE1(3)                ------->MYC2    <-         <---------ZAT18                          <---------TOE2(3)                ------->MYC3    --         <---------ABI4(2)                 --------->HSFB2a(1)                    --------->PIF3(3)<-         <---------ZAT14               --------->ANAC58                           --------->O2     --         --------->ZAT18               --------->ANAC58                           <---------PIF3(3)>>        --------->ALFIN1             --------->MYB52(1)                           <---------O2     ==      <---------ANAC58              --------->DEAR3(1)                            --------->TGA1a  --      <---------ANAC58              ----------->HVH21                    --------->ANAC58          == -----MYB46(1) --------->ALFIN1    --------->DEAR3(2)                    --------->ANAC58     ------- -----MYB83 <------NtERF2  <---------DEAR3(2)<---------ARR14(2)          --------->ANAC46  --------->ALFIN1 ======================bZIP_DOF    --------->MYB46(3)            ----------->GT1  <---------TGA1a  <- --------MYB46(3)        --------------------->WRI1          <---------RAP2.6(3)<---------ALFIN1   <-   atggtttagagtgcgccgtgtgtctcgctcggttcgaaccgacggaagttctgaggttattgccgaaatgtaaacacgccttccacgtggaatgtgttga  1747300  Previous    Next  AGI:  At5g05810.1    Description:  ATL43; protein binding / zinc ion binding. Identical to RING-H2 finger protein ATL5C precursor (ATL5C) [Arabidopsis Thaliana] (GB:Q5EAE9;GB:Q9FFJ7); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G20030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43201.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 1746831    to: 1748256    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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