Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->GLK1(2)                                           <---------ARR14(2)                                           --------->ARR14(2)                                           <---------GLK1(2)                   --------->LBD16                                           <---------ARR11(3)                 --------->ANAC55(2)                                          <---------HSFC1(2)                  <---------ANAC55(2)  <-                                          <---------HSFB2a(1)             ------>MYB46(1)      <-----                                          --------->HSFB2a(1)             ------>MYB83 --------->ANAC58                                          --------->HSFC1(2)            <---------MYB59--------->ANAC58 ----->YAB1                              ----------->ARR10              --------->TOE2(3)      ------ --ZmHOX2a(2)          --------->YAB1<---------HSFB2a(2)             ------->GAMYB   ---------->DOF2 --->ARR11(3)        --------->ANAC58--------->HSFB2a(2)            --------->MYB46(3)--------->DAG2 ----ARR11(3)        --------->ANAC58<---------HSFC1(1)             <---------MYB111(2)----------->GT1   cataaacaaaatcaattcttatcaagcatatgagcaattcgagaagattctactctaatcgatcgattcaacaacctaatccgtaagaaaagcaaaatta  1715500                                                                     <---------YAB1                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)                                                                  --------->ICU4                                                              <------NtERF2                                                             ------>NtERF2                                                <-------PIF5<---------RAP2.6(2)                                    --------->ZAT6       --------->ANAC46                                   <---------At5g28300   <---------RAP2.6(2)                                  <-----------GT1        <---------RAP2.3(2)                        -                           <---------LBD16      ------->PIF5--------->DEAR3(1)               <-------                          --------->ALFIN1  --------->LBD16 <---------DEAR3(1)               <-------            --------->ARR11(3)  --------->GLK1(1)       <---------LBD16                      <-------     <-----------HVH21  --------->ZAT2    --------->RAP2.3(1)--------->RAP2.6(2)          <---------MYB52(1)  ------->TEIL          --------->At4g35610--------->ANAC46--------->ATERF1(1)           <-------GAMYB --------->MYB52(1)     <---------At4g35610--------->RAP2.6(2)------>NtERF2              ============ --------MYB52(2)       <---------ZAT2  --------->ARR14(2)<---------RAP2.3(1)           <-----------RAV1(1) ----AHL20(2)--------->GLK1(2) <---------ARR14(2)       <---------At5g28300       <----------DOF2<--- --->AHL20(2)--------->CCA1(2) --------->ARR14(2)   <----------DOF2--------->YAB1 ===================   aacgaaccgtgagagatactggaccgagctggggatttacagtagccgcaagtgcttttacggcggccatgatcatcgattacgctttctctgttgcttc  1715600   <---------TGA1a   <---------O2   --------->TGA1a   --------->O2   <---------ANAC46   =====================================bZIP_DOF                                  <---------MYB52(1) <-----------HVH21                                                              <---------ANAC58 -------->DEAR3(1)                                                              <---------------AGL15 --ANAC46                                                                       --------------->AGL15 --ANAC58       --------->ANAC58                                                <---------ANAC58 --ANAC58       --------->ANAC58                                         --------->ARR11(3) ============MYC_MYB         ---------->DOF2             <---------At4g35610   ----------------->AGL1 ------ALFIN1   --------->ANAC46     <---------ICU4      --------->At4g35610<----------DOF2 ============bZIP_DOF        --------------------->WRI1--------->YAB1    <---------ARR11(3)         <   caccgtcgtggctactactcgcatcgtttttcaaagacataatcgccgattattcattcagaagaattttgctaagctctttccgtttggagaagaagac  1715700                                                                                                  ---                                                                                                  ---                                                                                             <-------                                                                                             --------                                                                                           --------->AHL20(2)                                                                                           --------->YAB1                                                                                          --------->ICU4                                                                ----------->GT1        <---------AHL20(2)                                              --------->At4g35610                    --------->ANAC55(2)                                *TSS    <------------CBF  ------------>CBF           ----------->GT1                   <----------DOF2 <---------AHL20(2) <---------MYB52(1)             <---------ANAC55(2)                <-----------GT1 --------->YAB1<---------At4g35610                <-------GAMYB   <---      <----------DOF2     <-----------GT1 <-----------RAV1(1)<------------CBF   <---------MYB46(3)<-- ---------ARR11(3) <---------DAG2  --------->AHL20(2)<-------GAMYB             <--------P <---------YAB1   ataatcttctttcacatttgactttttttttcaatattaaaacattgttgctgactgttatgcaattggcaaaatgaaggggttgttatgtaattataaa  1715800                                                            --------->MYB52(1)                                                           <---------ATHB51    <---------TOE2(3)                                      <---------AHL20(2)    <---------TOE1(3)                                     --------->AHL20(1) <---------AHL20(2)                                      --------->YAB1       --------->ARR11(3) ------>AHL20(1)                                   --------->ANAC58           <---------ARR11(3) ------>AHL20(2)                                   --------->ANAC58           --------->ARR14(2)  --- --YAB1                                            --------->ANAC46           <---------GLK1(2)   <-- --->TBP                                           ----------->GT1            <---------ARR14(2)  <-- ------AHL20(2)----------->GT1               --------->CCA1(2)      ----------->GT1             ----- -------AHL20(1)      --------->AHL20(2)---------->DOF2--------->AHL20(2)   *TSS           --------->At4g35610   tattttaagggaagaaaatgaaaaataaaaacattttggggcaaaagataaacacgaaaaaataatggaatcgataaacagattttcgatagcatcggca  1715900            --------->TOE2(3)                          <---------ANAC58            --------->TOE1(3)                          <---------ANAC58     <------ZmHOX2a(2)                                 <---------ANAC46 ------>ARR14(2)                                    --------->ALFIN1   <-----------HVH21           <- -------GLK1(2)                               --------->ANAC58        <---------DEAR3(2)       <----- -------ARR14(2)                              --------->ANAC58        <---------MYB46(3)   --------->ZAT6 ------>ARR10                    <---------LBD16----------->RAV1(2)  <---------DEAR3(1) --------->LBD16   gatttggatcaaaaccctaattctccagttcaatcttcggaagatggcaagcctgtggcgagcagtaatcggcggtcagaacaacaattccgaagactac  1716000                                                                                      <---------ANAC58                                                                                     <-------TEIL                                                                                  <---------HSFC1(2)                                                                                  --------->HSFB2a(1)                                                                                  <---------MYB46(3)                                                                                  <---------HSFB2a(1)                                                                                  --------->HSFC1(2)                                                                                <---------MYB52(1)                                                                              --------->DEAR3(1)                                                                             <------NtERF2                                                                           <---------DEAR3(1)                                                                           --------->DEAR3(1)                                           --------->ANAC46               --------->RAP2.3(1)                                           --------->ANAC58               --------->ATERF1(1)                <---------WRKY38(1)        --------->ANAC55(2)            <------NtERF2        <---------GLK1(1)         --------->ZAT2                         <---------ERF1       <---------ZAT6             --------->At4g35610                    <---------RAP2.3(1)    <------NtERF2                 ----------->RAV1(2)                    ------>NtERF2<---------ANAC58  <---------ANAC58            ------->TEIL --------->ANAC58              <---------ATERF1(1)  <---------ANAC58            --------->MYB52(1)                        <---------DEAR3(1)  <---------ANAC46           --------->MYB52(1)                         ----------->HVH21 <------NtERF2 --------->WRKY18(1)<---------ZAT2                        <---------RAP2.3(3) --------DEAR3(1)          <---------MYB52(2)             <-------TEIL  <---------RAP2.3(2) ----LBD16    <-----------HVH21--------->DEAR3(2)     <---------------AtSPL8------>NtERF2        ----   ggaggcgtagagttctggtcaaacccagaacgaaccggctggctcacgaaacaaggagagtacatcaagacttggcgacgccgatggttcgtgctcaaac  1716100                                     --------->ALFIN1                                   <---------ANAC46                                   <---------ANAC58                                   --------->O2                                   <---------O2                                   <---------TGA1a                                   <---------ANAC58                                   --------->TGA1a                                   -------------->OsCBT                                 <---------ANAC55(2)                                 --------->ANAC58                                 <---------O2                                 --------->O2                                 --------->ANAC58                                 <---------ANAC46                                 <---------TGA1a                                 --------->TGA1a                              --------->TGA2(2)                              ----------->HVH21                             <-----------TGA1                             <-----------HVH21                            <---------TGA1a                            --------->TGA1a                     --------->ANAC46                            --------->O2                   <---------SPL7                            <---------O2                  --------->bZIP60(1)                            --------->ANAC58              <---------ANAC58                            --------->ANAC46--------->ANAC58   <---------LBD16                            --------->TGA2(1)             <---------bZIP60(1)                            --------->ANAC58--------->ANAC46   <------NtERF2                       <-                            <---------bZIP60(1)           <---------ANAC58            ---------->DOF2                            --------->bZIP60(2)         <-----------HVH21    <----------DOF2       <-                            --------->bZIP60(1)        --------->ALFIN1 <---------ANAC58    ---------                            <---------TGA2(1)  --------->DEAR3(1)--------->LBD16 --------->MYB46(3)--                          ------>NtERF2 <-----------HVH21<------NtERF2  <---------ANAC58    <-------- ----->MYB52(1)          --------->DEAR3(1) --------->ANAC58--------->ATERF1(1)--------->MYB52(1) <--   aagggaaactcttctggttcaaagactccgacgtcacgcgtgtgtcacgccctcgcggtgtcgtccccgtagaatcgtgcttaaccgctaaaggagcaga  1716200             --------->YAB1           --------->ANAC46         --------->MYB46(3)    --------->ANAC58    --------->ANAC46    --------->ANAC58   ------->TEIL --------------AtSPL8 ----------ARR10                                                               ---------->DOF2 >At4g35610--------->ANAC58                                      --------->ARR14(2)         <------ZmHOX2a(2) ------------->AtSPL8                                ------->TEIL<---------ARR14(2)  --------->ATHB12 -At4g35610--------->ANAC58             --------->CCA1(2)--------->ATHB12   <------ZmHOX2a(1)       - ----ZmHOX2a(1)                 <---------ETT(2) --------------->AtSPL8     =======================HOX2a_HOX2a   ggatgtactcaacaagcaaaacgcgttcgagctatcgacgagaaatgagactatgtacttcattgctgattcggagaaggagaaagaagattggatcaat  1716300                                         --------->GLK1(2)                                        <---------GLK1(2)                                        <---------ARR14(2)                                    <---------DOF5.7(2)                                  --------->DOF5.7(2)                                  <---------MYB52(1)                               ------>ZmHOX2a(2)                               <-------TEIL                              <------ZmHOX2a(2)            <---------YAB1                             --------->ARR14(2)     <---------MYB52(1)                             <---------ARR14(2)    <-------GAMYB --------->MYB46(3)                             <---------GLK1(2)   <------ZmHOX2a(2)                             --------->AGP1     --------->ARR11(3)        <---------TOE2(3)                --------->AtLEC2 <-----------HVH21------>ZmHOX2a(2)      ---------->DOF2            - -------------------->WRI1   <---------ARR11(3) <---------ARR11(3)   --------->ZAT6          <-------   tccattggacgttccatcgtgcaaaactccagatccgttaccgattctgagatcgttgattacgataacaaacactaaagtttctctgtttttgtctttt  1716400  Previous    Next  AGI:  At5g05700.1    Description:  ATE1 (DELAYED LEAF SENESCENCE 1); arginyltransferase. Identical to Arginyl-tRNA--protein transferase 1 (ATE1) [Arabidopsis Thaliana] (GB:Q9ZT48); similar to arginine-tRNA-protein transferase, putative / arginyltransferase, putative / arginyl-tRNA-protein transferase, putative [Arabidopsis thaliana] (TAIR:AT3G11240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41343.1); similar to Os05g0446800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055690.1); contains InterPro domain Arginine-tRNA-protein transferase, N-terminal; (InterPro:IPR007471); contains InterPro domain Arginine-tRNA--protein transferase 1, eukaryotic (Inter Range:  from: 1712671    to: 1715732    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g05710.1    Description:  pleckstrin homology (PH) domain-containing protein. similar to ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1) [Arabidopsis thaliana] (TAIR:AT2G29700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41338.1); contains InterPro domain Pleckstrin-like (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type (InterPro:IPR011993) Range:  from: 1715876    to: 1716500    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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