Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   --                                                                                                   <-                                              ------>ZmHOX2a(2)                                  ----                                             --------->GLK1(1)                                  <----                                             <------ZmHOX2a(2)                             <---------ICU4                             ---------->DOF2<---------ARR11(3)                             <--------ATHB1                          --------->ANAC58  --------->ARR11(3)                             --------->YAB1                          --------->ANAC58  <---------AGP1                                <---------ATHB12                    --------->DAG2         --------->RVE1(1)                              <---------ATHB51          <---------------AtSPL8   <-------TEIL                                        <-------------       --------->YAB1   ---------->DOF2 ---------->DOF2                                --------------  --------->WRKY18(1)----------->GT1<---------ANAC55(2)               <-------TEIL    --------------- <--------ZAP1     ---------->DOF2--------->CCA1(2)      <---------ETT(2)             ---------------   ctcggtcaataagagctacagaaaagtaaagcaaagatacataaaagatctctattctgtcaacaaaattggttcatcacacatagagtccaataatagc  1715300    --------->TOE2(3) ------>GAMYB                                                                   --------->ATHB12 ------->MYB46(3)                                                       <--------HAHB4 --------MYB52(2)                                                       --------->ATHB12 ------->RAV1(1)                 --------->At4g35610                    --------->YAB1 ------ID1                       <---------At4g35610                    <---------ICU4           ---- --AGL15             --------->At5g28300                               <---------ATHB12         <---- ->AGL15         --------->MYB52(1)<---------YAB1                    --------->WOX13(1)        ------ -->AGL2     --------->YAB1    <---------ZAT14                     <---------YAB1        <----------DOF2 -->AGL3    <---------ZAT6 --------->GLK1(2)                 <---------YAB1 <---------AHL20(2) <-----   aacaaaccttggtagtcataaacggtaagagtctgtgctgataaacctgcattgacattcactatgtttatcaatcatttattcattggaactttaagat  1715400                                            --------->GLK1(2)                                           <---------ARR11(3)                                           --------->ARR14(2)                                           <---------ARR14(2)                  --------->LBD16                                           <---------GLK1(2)                  <---------ANAC55(2)                                          --------->HSFB2a(1)                 --------->ANAC55(2)  <-                                          --------->HSFC1(2)              ------>MYB46(1)      ------                                          <---------HSFB2a(1)             ------>MYB83 ----------->GT1                                          <---------HSFC1(2)            --------->TOE2(3)      <----- ----->YAB1                              ----------->ARR10              <---------MYB59--------->ANAC58 --ZmHOX2a(2)          --------->YAB1<---------HSFB2a(2)             ------->GAMYB   ---------->DOF2 --->ARR11(3)        --------->ANAC58--------->HSFB2a(2)            <---------MYB111(2)--------->ANAC58 ----ARR11(3)        --------->ANAC58<---------HSFC1(1)             --------->MYB46(3)--------->DAG2   cataaacaaaatcaattcttatcaagcatatgagcaattcgagaagattctactctaatcgatcgattcaacaacctaatccgtaagaaaagcaaaatta  1715500                                                                     <---------YAB1                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                                  --------->ICU4                                                              ------>NtERF2                                                             --------->RAP2.6(2)                                                <-------PIF5<---------RAP2.6(2)                                    --------->ZAT6       --------->ANAC46                                   <---------At5g28300   <---------RAP2.3(2)                                  <-----------GT1        <---------RAP2.6(2)                        -                           <---------LBD16      ------->PIF5--------->DEAR3(1)               <-------                          --------->ALFIN1  --------->LBD16 <---------DEAR3(1)               <-------            --------->ARR11(3)  --------->GLK1(1)       <---------At5g28300                  <-------     <-----------HVH21  --------->At4g35610--------->RAP2.6(2)<------NtERF2               <---------MYB52(1)  ------->TEIL          <---------ZAT2    --------->RAP2.3(1)------>NtERF2               ============ --------->MYB52(1)     <---------At4g35610--------->ANAC46--------->ATERF1(1)           <-------GAMYB --------MYB52(2)       --------->ZAT2  --------->ARR14(2)<---------RAP2.3(1)           <-----------RAV1(1) --->AHL20(2)--------->GLK1(2) --------->ARR14(2)       <---------LBD16           <----------DOF2<--- ----AHL20(2)--------->CCA1(2) <---------ARR14(2)   <----------DOF2--------->YAB1 ===================   aacgaaccgtgagagatactggaccgagctggggatttacagtagccgcaagtgcttttacggcggccatgatcatcgattacgctttctctgttgcttc  1715600   <---------O2   <---------TGA1a   <---------ANAC46   --------->TGA1a   =====================================bZIP_DOF   --------->O2                                                                   <---------MYB52(1) <-----------HVH21                                                              <---------------AGL15 -------->DEAR3(1)                                                              <---------ANAC58 --ANAC58                                                                       <---------ANAC58 --ANAC46       --------->ANAC46                                                --------------->AGL15 --ANAC58       --------->ANAC58                                         <---------ARR11(3) ============MYC_MYB         --------------------->WRI1  <---------At4g35610   ----------------->AGL1 ------ALFIN1   --------->ANAC58     <---------ICU4      --------->At4g35610<----------DOF2 ============bZIP_DOF        ---------->DOF2           --------->YAB1    --------->ARR11(3)         <   caccgtcgtggctactactcgcatcgtttttcaaagacataatcgccgattattcattcagaagaattttgctaagctctttccgtttggagaagaagac  1715700                                                                                                  <--                                                                                                  ---                                                                                             <-------                                                                                             --------                                                                                           --------->AHL20(2)                                                                                           --------->YAB1                                                                                          --------->ICU4                                                                ----------->GT1        <---------AHL20(2)                                              <---------At4g35610                    --------->ANAC55(2)                                --------->YAB1--------->At4g35610                    ----------->GT1                   <---------DAG2  --------->AHL20(2) <---------MYB52(1)             <---------ANAC55(2)                <-----------GT1 *TSS    <------------CBF  ------------>CBF       <-------GAMYB   <---      <----------DOF2     <-----------GT1 <-----------RAV1(1)<------------CBF   <---------MYB46(3)--- ---------ARR11(3) <----------DOF2 <---------AHL20(2)<-------GAMYB             <--------P <---------YAB1   ataatcttctttcacatttgactttttttttcaatattaaaacattgttgctgactgttatgcaattggcaaaatgaaggggttgttatgtaattataaa  1715800                                                            --------->MYB52(1)                                                           <---------ATHB51    <---------TOE2(3)                                      <---------AHL20(2)    <---------TOE1(3)                                     --------->AHL20(1) <---------AHL20(2)                                      --------->YAB1       <---------GLK1(2) -------AHL20(1)                                   --------->ANAC58           <---------ARR14(2) ------>AHL20(2)                                   --------->ANAC46           <---------ARR11(3)  <-- --YAB1                                            ----------->GT1            --------->ARR14(2)  --- --->TBP                                           --------->ANAC58           --------->ARR11(3)  <-- ------AHL20(2)----------->GT1               --------->CCA1(2)      ----------->GT1             ----- ------>AHL20(1)      --------->AHL20(2)---------->DOF2--------->AHL20(2)   *TSS           --------->At4g35610   tattttaagggaagaaaatgaaaaataaaaacattttggggcaaaagataaacacgaaaaaataatggaatcgataaacagattttcgatagcatcggca  1715900            --------->TOE1(3)                          <---------ANAC46            --------->TOE2(3)                          <---------ANAC58     <------ZmHOX2a(2)                                 <---------ANAC58 -------ARR14(2)                                    --------->ALFIN1   <-----------HVH21           <- ------>ARR14(2)                              --------->ANAC58        <---------DEAR3(2)       <----- -------GLK1(2)                               --------->ANAC58        <---------MYB46(3)   --------->ZAT6 ------>ARR10                    <---------LBD16----------->RAV1(2)  <---------DEAR3(1) --------->LBD16   gatttggatcaaaaccctaattctccagttcaatcttcggaagatggcaagcctgtggcgagcagtaatcggcggtcagaacaacaattccgaagactac  1716000                                                                                      <---------ANAC58                                                                                     <-------TEIL                                                                                  --------->HSFB2a(1)                                                                                  <---------MYB46(3)                                                                                  <---------HSFC1(2)                                                                                  <---------HSFB2a(1)                                                                                  --------->HSFC1(2)                                                                                <---------MYB52(1)                                                                              --------->DEAR3(1)                                                                             <------NtERF2                                                                           <---------DEAR3(1)                                                                           --------->DEAR3(1)                                           --------->ANAC55(2)            --------->ATERF1(1)                                           --------->ANAC58               <------NtERF2                <---------WRKY38(1)        --------->ANAC58               --------->RAP2.3(1)        <---------GLK1(1)         --------->ZAT2                         ------>NtERF2<---------ANAC58       <---------ZAT6             --------->At4g35610                    <---------ERF1    <------NtERF2                 ----------->RAV1(2)                    <---------ATERF1(1)  <---------ANAC58            ------->TEIL --------->ANAC46              <---------RAP2.3(1)  <---------ANAC46            --------->MYB52(1)                        <---------DEAR3(1)  <---------ANAC58           --------->MYB52(1)                         <---------RAP2.3(2) <------NtERF2 --------->WRKY18(1)<---------ZAT2                        <---------RAP2.3(3) --------DEAR3(1)          <---------MYB52(2)             <-------TEIL  ----------->HVH21 ----LBD16    <-----------HVH21--------->DEAR3(2)     <---------------AtSPL8------>NtERF2        ----   ggaggcgtagagttctggtcaaacccagaacgaaccggctggctcacgaaacaaggagagtacatcaagacttggcgacgccgatggttcgtgctcaaac  1716100                                     --------->ALFIN1                                   --------->O2                                   -------------->OsCBT                                   <---------ANAC58                                   <---------O2                                   <---------ANAC58                                   <---------ANAC46                                   --------->TGA1a                                   <---------TGA1a                                 <---------ANAC55(2)                                 <---------TGA1a                                 --------->ANAC58                                 <---------ANAC46                                 <---------O2                                 --------->O2                                 --------->ANAC58                                 --------->TGA1a                              ----------->HVH21                              --------->TGA2(2)                             <-----------HVH21                             <-----------TGA1                            --------->ANAC58                            --------->ANAC46                    --------->ANAC46                            <---------TGA2(1)              <---------SPL7                            --------->bZIP60(1)           --------->bZIP60(1)                            <---------bZIP60(1)           <---------bZIP60(1)                            --------->TGA2(1)             <---------ANAC58                            <---------TGA1a               <---------ANAC58                            --------->O2                <-----------HVH21                          <-                            <---------O2               --------->ALFIN1 <---------ANAC58           --                            --------->TGA1a --------->ANAC46   <------NtERF2 <----------DOF2<--------                            --------->ANAC58--------->ANAC58   <---------LBD16        ---------->DOF2                            --------->bZIP60(2)--------->DEAR3(1)--------->LBD16 --------->MYB46(3)<-                          ------>NtERF2 <-----------HVH21<------NtERF2  <---------ANAC58    --------- ----->MYB52(1)          --------->DEAR3(1) --------->ANAC58--------->ATERF1(1)--------->MYB52(1) <--   aagggaaactcttctggttcaaagactccgacgtcacgcgtgtgtcacgccctcgcggtgtcgtccccgtagaatcgtgcttaaccgctaaaggagcaga  1716200  Previous    Next  AGI:  At5g05700.1    Description:  ATE1 (DELAYED LEAF SENESCENCE 1); arginyltransferase. Identical to Arginyl-tRNA--protein transferase 1 (ATE1) [Arabidopsis Thaliana] (GB:Q9ZT48); similar to arginine-tRNA-protein transferase, putative / arginyltransferase, putative / arginyl-tRNA-protein transferase, putative [Arabidopsis thaliana] (TAIR:AT3G11240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41343.1); similar to Os05g0446800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055690.1); contains InterPro domain Arginine-tRNA-protein transferase, N-terminal; (InterPro:IPR007471); contains InterPro domain Arginine-tRNA--protein transferase 1, eukaryotic (Inter Range:  from: 1712671    to: 1715732    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g05710.1    Description:  pleckstrin homology (PH) domain-containing protein. similar to ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1) [Arabidopsis thaliana] (TAIR:AT2G29700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41338.1); contains InterPro domain Pleckstrin-like (InterPro:IPR001849); contains InterPro domain Pleckstrin homology-type (InterPro:IPR011993) Range:  from: 1715876    to: 1716500    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version