Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                <----                                                                              <------NtERF2     <----                                                                             <---------At4g35610-----                                                                         --------->DAG2       -------        ------>ZmHOX2a(1)              <---------ZAT6                  ---------->DOF2        ------>NtERF2  <---------YAB1                 <---------HSFB2a(2)               --------->TOE2(3)         -------- ---------ICU4                   --------->HSFB2a(2)          <---------YAB1<---------DEAR3(1)<------ -------->YAB1              --------->At4g35610             <---------At4g35610             <-------- --->TOE2(3)<---------ICU4  <---------At4g35610             --------->At4g35610      <-----------GT1 >P    --------->TOE2(3)   --------->ARR11(3)             <-----------RAV1(2)--------->At4g35610----- >MYB55(1)  --------->YAB1 <---------ARR11(3) <------ZmHOX2a(2)  <---------YAB1     ----------->HVH21   catcatcatcctcatcatcatcttcaagagagcttccagtagagttcgatccagttggattcagatgattcttaaaaggcgctgatttgacaactccgcc  1640200   --------->GLK1(1) -------At4g35610 -------ZAT2                                     --------->ANAC58 ------>At4g35610                                --------->ANAC58 -->NtERF2                                       --------->ANAC46 -------RAV1(2)                                  <----------ID1 -----ATERF1(2)                            --------->HSFB2a(2) ---->ATERF1(2)                            <---------HSFB2a(2)<------NtERF2 -->LBD16                              --------->At5g28300   ------>NtERF2 ->ANAC46        <---------PCF5        <-------GAMYB        <---------DEAR3(1)                      - -----HVH21     ----------->HVH21     <---------MYB46(3)   --------->ATERF1(1)       --------------->AtSPL8 -LBD16     --------->MYB52(1)       <---------ANAC46     <---------ATERF1(1)      <---------MYB52(1) ---->DEAR3(1) ------->GAMYB         <---------DEAR3(1)  --------->ETT(2)  <----------DOF2     <<<<<<   agccgatttcttcacaacgggaccgattagaacatcgaggcggttatagaaacgccaagtcgacggcgagagtttagctttctctgttttgtacttcttc  1640300                                                                                  ===============bZIP_DOF                                                                                  <---------ANAC46                                                                                  --------->TGA1a                                                                                  --------->bZIP60(2)                                                                                  --------->O2                                                                                  <---------O2                                                                                  <---------TGA1a                                                                                 <------NtERF2                                                                                 --------->ATERF1(1)                                                                                ------>NtERF2                                                                                <---------ATERF1(1)                                                                               ----------->HVH21                                                                               <---------DEAR3(1)                                                                               --------->DEAR3(1)                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                             <---------ATERF1(1)                                                                             <---------DEAR3(2)                                                                             <---------RAP2.3(1)                                                                             ------>NtERF2                                                                            --------->DEAR3(1)                                                                            <---------At1g77200                                                                            <---------DEAR3(1)                                                                           <------NtERF2                                                                          <-----------HVH21                                                                          ------>NtERF2                                                                          <---------ATERF1(1)                                                                          <---------SPL7                                                                         <---------DEAR3(1)                                                                         <---------ANAC46                                                                       ------->GAMYB                                                                       =====================MYC_MYB                         --------->At5g28300              --------->REM1(2)--------->ATERF1(1)                     --------->ZAT6                  <---------At5g28300 --------->DEAR3(1)               --------->ARR14(2)                   <-----------GT1 <---------DOF5.7(2)              <---------MYB52(1)               =============================================MYC_MYB             --------->LBD16    <------MYB46(1)<-------GAMYB        --------->MYB52(1)       <------- --------->DOF2<---------ARR14(2)        --------->RAP2.6(3)      --------->DOF5.7(2) <----------DOF2 <<<TBF1   <---------LBD16      <------MYB83  <---------MYB46(3)<---------ZAT6--------->RAP2.3(1)  <-   ttcaaagtatcgacccggttcttacactgtaagtcggtcttcttacggctgttatcaccgtgtctagagttaacggcgtcggcgacgtctttccagtcat  1640400                                                                       ------>ZmHOX2a(1)                                                                 <---------DEAR3(2)                                                               <------NtERF2                                                               <---------MYB52(1)                                                              <---------ATERF1(1)                                                              ------>NtERF2                                                              <-----------HVH21                           --------->ANAC46                  <---------DEAR3(1)                           <---------ANAC55(2)               --------->DEAR3(1)               <---------MYB46(3)                           --------->ATERF1(1)             --------->LBD16     --------->ATHB12          <---------ATERF1(1)            <---------ANAC58    <---------YAB1             ------>NtERF2<---------ALFIN1            <---------ANAC58    --------->ICU4             <---------RAP2.3(1)        --------->GLK1(1)  <---------ANAC58               --------->DEAR3(1)        <---------GLK1(1)  --------->ANAC55(2)            <---------DEAR3(1)    <------NtERF2          --------->bZIP60(1)          <---------ATERF1(1)   --------->LBD16         <---------bZIP60(1)          <-----------HVH21 --------->ANAC46          <  <---------ANAC46         <---------ANAC58            --------->DEAR3(1) --------->ANAC58        --- <---------LBD16     <---------At4g35610 <-----------RAV1(2)--------->RAP2.3(1)                  ---- --ATHB12   <---------ANAC46  --------->MYB52(1)  -------->P<------NtERF2 --------->ANAC58      ----- ----------RAV1(1)   --------->At4g35610 <---------ALFIN1--------->ATERF1(1)                   ------   tctgccggagatttccgtggttcagcttgacgtaacgattgccccaggcttctaccagcgtcgccgtcgcttcctcactccaccagtcttctcttcccaa  1640500         ----------->HVH21       --------->ALFIN1      <-------GAMYB     <------MYB83     <---------MYB46(3)                 <---------ATERF1(1)     <---------DEAR3(2)             --------->DEAR3(1)     <------MYB46(1)                <---------DEAR3(1)    <---------DREB2C(2)            --------->ATERF1(1)                                             <-    <---------DEAR4(1)             <------NtERF2                                                   <-    <---------DEAR3(1)            ------>NtERF2                                                   <--    --------->MYB46(2)            <---------ATERF1(1)                                            <---    <---------MYB46(3)           <---------DEAR3(1)                                             <----    --------->MYB111(2)          <---------ANAC46                                               <----    --------->MYB55(2)           --------->DEAR3(1)                                          --------   <---------ORA47(1)           --------->RAP2.3(1)                                          <-------   <---------MYB55(1)           --------->ATERF1(1)                                          <-------  <-----------HVH21             <------NtERF2                                        <------ZmHOX2a(1)  <-------GAMYB                 ------>NtERF2                                        ================ <---------SPL7                ------>NtERF2                                         ================ <---------MYB46(3)            <---------RAP2.3(1)                             <---------LBD16------>NtERF2 ------------>AtMYB15          <---------ATERF1(1)                            <---------LBD16<------- <---------DEAR3(2)           <---------DEAR3(1)                             --------->MYB52(1) <---- ------------>AtMYB84        <---------ZAT14                               <---------ABI4(2) <------- ---------DEAR3(1)           <---------At4g35610                           --------->ZAT18  --------- ---->GAMYB                  <---------LBD16                 <---------ZAT6<---------ZAT14 --------->MYB52(1) ----->MYB46(3)              --------->At4g35610             <-----------RAV1(1)--------->LBD16<----- ---->SPL7<---------PCF2<---------YAB1<------NtERF2   <------NtERF2      <---------ZAT18  ----------- --->MYB52(1) <---------ALFIN1<---------RAP2.3(2)   <---------LBD16      --------->ZAT18  -----------   cggcggtcggtgggacacacttgattttgactgcggcgtcgtcgtctccattcgtcgggagtagtgttgctaatgtgcgcaccgggaggagagtgacggc  1640600         ------>ZmHOX2a(2)       <---------ARR14(2) ===============HOX2a_HOX2a <------ZmHOX2a(1) ==============HOX2a_HOX2a --------TOE2(2) --------TOE1(2) ----NtERF2 ------SPL7 -----ANAC58 -----ANAC58 ->bZIP60(1) --RAP2.6(2) --RAP2.3(3) ===============HOX2a_HOX2a                                                                        << ==============HOX2a_HOX2a                                                                       ---- --bZIP60(1)                                                       --------->LBD16             <----- -----ANAC46                                                     ----------------->AGL1        <----- --DEAR3(1)                                                      <---------LBD16               <----- >RAP2.6(3)         <---------MYB52(2)                       <------ZmHOX2a(1)               -------- -NtERF2<------ZmHOX2a(2)                               --------->MYB55(2)                <---------- >TGA1 *TSS    ----------->GT1                          <---------MYB46(3)          <------ZmHOX2a(1) >HVH21--------->ARR14(2)         ---------->DOF2   <---------AtMYB61      <----------ARF1--------->ALFIN1   gtaggataagatcggaatagaaacaaacaaaacataaaaagaagttttttttttttggtgggaggaaaccggaatgggagagaagaggataagtgtggcc  1640700                         ----------->HVH21                    <-----------HVH21                    <-----------TGA1                   ================================bZIP_DOF                   --------->ANAC55(2)                   ===========================================MYC_MYB                   <---------ANAC55(2)                   <---------O2                   <---------ANAC58                   <---------ANAC58                   --------->ANAC58                   --------->O2                   --------->bZIP60(1)                   --------->TGA1a                   --------->bZIP60(2)                   <---------bZIP60(2)                   --------->ANAC58                   <---------bZIP60(1)                   --------->TGA2(1)                   <---------TGA1a                   <---------TGA2(1)                  ----------->STF1                ----------->HVH21                ----------->TGA1               <------NtERF2               --------->ATERF1(1)               --------->At5g28300      ----------->HVH21  --------->WRKY12    --------->YAB1<-----------STF1 <------------CBF<---------TGA2(2) <<<<<GRF7     <-----------HVH21                                                ------>MYB46(1) ------->HVH21<---------MYB46(3)                                                ------>MYB83 ----ANAC58   <---------ATERF1(1)                     ------->GAMYB        ------>MYB83 ----ANAC46   <---------DEAR3(2)                    --------->SPL7         ------>MYB46(1) ----ANAC58  <---------DEAR3(1)                    --------->MYB52(1)    <---------MYB59 ->ZAT18    <---------ABI4(1)               <---------AtMYB61     <---------MYB52(1) <----------DOF2 -RAV1(1) <---------DEAR3(1)            <----------DOF2    ---------->TaMYB80--------->MYB46(3)<-----   tgacattgatgaccggcggtgacgtcactgaccgtattggagcgttttggtcccaacggcgattatccgttaagaccgaaccaatctctttggtctcgtt  1640800               ----------->GT1      --------->ATHB12                                                                       --------     <---------YAB1             <---------ICU4                                              ---------     --------->ICU4            <---------YAB1                       ---------->DOF2    --------->TOE2(3)  --------->ICU4           --------->TOE2(3)              --------->TOE2(3)  --------->TOE2(3) ----MYB52(1) ----------->GT1  --------->ICU4             --------->TOE1(3) <---------ANAC55(2) -----   agtacttatgattaaactgttaaaaaaaacctcataatttttcatttatcccaaaacaaacctcaaactaaaaagattacataaataaacctctaaaagt  1640900  <---------GLK1(2)  --------->ARR14(2)                                                              --------->AHL20(2)  <---------ARR14(2)          --------->AHL20(2)                              <---------ATHB12  ----- ->DAG2                       <---------AHL20(1)                         >>>>>>>>>>>>>>>>>LFY<------- ->DOF2                       --------->AHL20(1)   <-----------GT1     <----------DOF2     ---------- ------>HVH21           ----------->GT1     <---------AHL20(2)   <-----------GT1  <---------AHL20(2)   gacagattgggtcaatagcaaatagttggaaatattttagttttatttcattttaagccttcaagttttacttctttccaatgtttaaattttgtctttc  1641000                                                                     <---------ARR11(3)                                                                     --------->ARR11(3)                                                     --------->AHL20(2)                                                     <---------AHL20(2)                    <---------HSFB2a(1) --------->At4g35610   --------->ATHB12             --------->AHL20(2)                    <---------ARR11(3) ---->YAB1          --------->GLK1(1)               <---------AHL20(2)      <----------DOF2--------->HSFB2a(1) ---DOF2         <---------TOE1(2)      ---------->DOF2     <---------At4g35610           --------->ARR11(3) >ID1       <-----------HVH21------->TEIL--------->DAG2     ------>ZmHOX2a(1)  --------->ZAT6       <   ataagctcagacttcgtcccagatttcattgcatctagcacagaaagtgtttgattaaattcctctgagaacatctctctttcactaagcgaaatcttcc  1641100  Previous    Next  AGI:  At5g05550.1    Description:  transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G11100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41403.1) Range:  from: 1639035    to: 1640607    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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