Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------AtMYB61                                                                        <---------ANAC46                    <---------ANAC46                                    <---------ANAC58               ------->TEIL                                           <---------ANAC58      ---------->DOF2                                                 <---------ANAC58  <---------At4g35610         <----------DOF2                      <----------DOF2   ---------->DOF2  --------->At4g35610        <---------DAG2              <----------DOF2<---------ANAC58         ----   actcatctgaaagcatgaatcttcgtgttcgccttttagttctaacttacaatttccttcttttatgttctttggtgtgaggtcgaagaaaggagagaaa  1620100                                                                ----------->GT1                                          <---------DAG2        <---------ANAC46                                          <----------DOF2 <---------AHL20(2)          <--------HAHB4        --------->ATHB12         <---------HSFB2a(2)      <---------ATHB51           --------->ICU4   <---------YAB1  --------->ARR14(2)   ------->TEIL    --------->YAB1            <---------YAB1 ----->ICU4      <---------YAB1  --------->HSFB2a(2)  --------->AHL20(2) <---------TOE2(3)   tgactatgagtgagtggtcacgattcgaaatacttctcgatgaacttttcccaagttaaaataatggggtaaactaagaatatttcgattattaagaggt  1620200                 --------->ANAC46               <-----------GT1           --------->AHL20(2)           <---------AHL20(2)          <---------AHL20(1)          --------->AHL20(1)                         <---------TOE1(3)          <---------AHL20(2)                    <---------TOE2(3)      <-----------GT1          --------->AHL20(2)            <---------At4g35610          <---------AHL20(2)         --------->AHL20(2)             <---------ZAT2               --------->AHL20(2)  --------->WOX13(1)         <---------AHL20(2)           --------->ANAC46<---------At4g35610      <---------AHL20(2) ---   ----------->GT1       <-----------GT1--------->At4g35610 --------->TOE2(3)<----------DOF2     <---   tgaagttgtaaattaatttacgacatattaccaaaaatacacagctcattaagttaagctaatctcaacattttaatctctttatttgaatcaattagtt  1620300                                                                                   --------->HSFB2a(2)                                                                               <---------SPL7<-------                                                                              <---------ANAC58                                                                  ----------->TBP  <---------HSFB2a(2)                                                         --------->ANAC46     <---------ANAC46     <----------DOF2                                     --------->ANAC58     <---------ANAC58    --------->TOE2(3)                              <---------MYB52(1)        --------------->AtSPL8    <---------DAG2                                 --------->DOF5.7(2)       --------------->AtSPL3 -   <---------------AGL15<----------DOF2           --------->TOE2(3)          <------NtERF2   <------- ------>YAB1      --------------->AtSPL8          --------->TOE1(3)   --------->MYB52(1)     <------- ----TEIL         --------------->AtSPL3 <-----------GT1 --------->ANAC58  --------->ALFIN1 <--------   tcataacctttttagtaatttcagtacttttattttgtagattaaacggtatcgttagcaagccaactacaaaaacggtgtcgtactagaatgggccgtg  1620400                                                             <---------SPL7                                                           --------------->AtSPL8                                                           *TSS <-----------------AGL3                                                           --------------->AtSPL3 --ANAC58                                                 --------->GLK1(2)          --------->TOE2(3) -------->GLK1(2)                  <---------O2          <---------GLK1(2)        <---------CCA1(2) --ANAC58          <------------CBF--------->O2     ----------->RAV1(1)       --------->TOE2(3) --ANAC46     <------NtERF2     --------->ANAC46   --------->ANAC46           --------->TOE1(3) -DEAR3(1)  <---------DEAR3(1)<-----------GT1    <-----------GT1----------------->AGL1       ------>ZmHOX2a(1)   agaatgtgagcgactcggcgagattgaagattatacgacgtcgactatttttaacgacagaatcgtaccaattttgaaaaccctaaatctcaatcctcga  1620500                                                                                               ------                                                                                               ------                                                   <---------ARR11(3)                          ------                                                   --------->ARR11(3)                          <-----                                                  --------->GLK1(1)                            <-----                                                --------->LBD16                         --------->ZAT2                                           <---------ANAC58                             <---------ZAT2                                           <---------ANAC58                            ------>ZmHOX2a(1)                                          <---------HSFC1(2)                       --------->GLK1(2)                                          --------->HSFC1(2)                    <---------ANAC58                                          --------->ZAT2                        <---------ANAC58                                          --------->HSFB2a(1)              <---------ICU4     <------                         <----------DOF2  <---------At4g35610        --------->YAB1<---------ARR14(2)                      <-----------GT1     --------->At4g35610    --------->GLK1(2) --------->ARR14(2)                    --------->YAB1       <---------TOE1(2)      <---------GLK1(2) <---------ARR14(1)   cgctctctactaagaaactcaatcttactttctctgtaattcgtagcttccgaaatcttttctcaagaatctcataaccatggcgaatcctgctccgaat  1620600                                                                                          <---------CCA1(2)                                                                                         <-----------ARR10                                                                                         ------->TEIL                                                                                      <---------ANAC58                                                                                      <---------ANAC55(2)         <---------TOE2(2)                                                            <---------ANAC55(1)      <---------ANAC46                                                    <---------O2--------->ANAC55(2)      <---------ANAC58                                                    <---------bZIP60(2)      <---------ANAC58                                  --------->At4g35610      <---------At4g35610    <XXXXXXXXXXXXXXXXXXXXMIR416    --------->ETT(2)     <---------At4g35610      --------->At4g35610 <---------GLK1(2)                 <---------ETT(2)   <-----------RAV1(2) <---------TGA1a--------->ARR14(2) ->TEIL  <---------TOE1(2) ----------->RAV1(2)   <---------YAB1          ----------------------->TaNAC69(2) --->ARR14(2)           --------->GLK1(1)    <------NtERF2              ------>NtERF2 <---------ANAC58 --->GLK1(2)            <---------GLK1(1)  <---------DEAR3(1)          ----------->HVH21 <---------ARR11(1) ----ARR11(1)          <---------ARR14(2)  <---------ANAC46          --------->At4g35610 <---------ARR14(2) ----ARR14(2)          --------->ARR14(2)  <---------DREB2C(2)       <---------At4g35610<---------CCA1(2) ---ARR14(1)     ------->TEIL   <---------REM1(1)--------->ICU4  --------->AtMYB61    <---------ANAC46   ctagaatgtcgtatgtacgaatcgagataccctgatgtagacatggcggtgatgattcaggtgaagaccatcgctgacatgggagcttacgtatctctcc  1620700                                                                                       <---------SPL7                                                                                      <---------ANAC58                                                                                      <---------ANAC58                                                                                    <-----------HVH21                           ------>ZmHOX2a(1)                                        <-------GAMYB                         ------>ZmHOX2a(2)                 <---------TOE1(2)       <------MYB83                       <---------ARR11(3)              <-------TEIL                <---------DEAR3(2)                       --------->ARR11(3)            <---------ARR14(2)            <------MYB46(1)                     <---------HSFB2a(1)         <------NtERF2                    --------->MYB59                     <---------KAN4(1)          <-----------HVH21                 <---------DREB2C(2)                     --------->ICU4             <---------SPL7                    <---------DEAR3(1)                     --------->KAN4(1)          ------>NtERF2   --------->ZAT6    <---------MYB46(3)                     --------->HSFB2a(1)       --------->DEAR3(1)    --------->At4g35610 --------->SPL7                    <---------KAN4(2)<---------ZAT2  --------->ARR14(2)         <-----------HVH21                <---------TOE1(2)    --------->ZAT2  <---------GLK1(2)     <---------ATHB12   ttgaatacaacaacatcgaaggaatgatcctgttctccgagctctctcgccgtcggattcgtagtatcagtagcttaatcaaggtcggtcgtaccgagcc  1620800                                                               --------->ICU4<---------ANAC58                                                            <---------ZAT6   <---------ANAC46                                                           <---------------------WRI1               <---------ETT(2)                       <---------ZAT6  ---------->DOF2               --------->ETT(2)         ------>ZmHOX2a(2) --------->MYB52(2) <---------ANAC58 -------          <---------ANAC58              ==================================HOX2a_HOX2a        <-------          <---------ANAC58            <---------ARR11(3)<--------P <------ZmHOX2a(1)     ----------->GT1        ------>ZmHOX2a(1)   ----------->GT1    <---------DOF5.7(2)<----------ID1     <------ZmHOX2a(1)   tgttatggtccttcgtgtcgatagagagagaggttacattgatctcagtaaacgtagggttagtgatgaggacaaagaggcttgtgaggagaggtataat  1620900                                             <------MYB83                                             <------MYB46(1)                                            <---------AtMYB61                                           <---------MYB52(1)           <---------ZAT18       <---------At4g35610                                        <--------     <---------ZAT2<---------ATHB12      <-----------RAV1(1)            --------->TOE1(2)   ---------    --------->ANAC58     <-----------HVH21<-------GAMYB                --------->YAB1       ---------    --------->ANAC58--------->YAB1<---------ANAC46                <-------TEIL--------->GLK1(2) -->YAB1   --------->ZAT14       --------->At4g35610       ----------->GT1   <---------GLK1(2) --YAB1    --------->ZAT18   <-----------RAV1(1) <------NtERF2<---------KAN4(2)    ----------->HVH21   aagagcaagcttgttcactctatcatgcgtcatgttgctgagactgttggtgtcgatttggaggtatattcattcatacgattctctgactcttctcgaa  1621000  Previous    Next  AGI:  At5g05470.1    Description:  EIF2 ALPHA (eukaryotic translation initiation factor 2 alpha subunit); RNA binding. similar to eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative [Arabidopsis thaliana] (TAIR:AT2G40290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21404.1); contains InterPro domain Eukaryotic translation initiation factor 2, alpha subunit; (InterPro:IPR011488); contains InterPro domain S1, RNA binding; (InterPro:IPR003029); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 1620459    to: 1622341    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version