Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <-----------GT1                                                                  <-----------GT1                                                                <---------YAB1                                                              <---------CCA1(1)                                                              <---------RVE1(1)                ------                                       ---------->DOF2       <---------ARR11(3)          ------->TEIL ---------ZAT14                <-------TEIL                  --------->ARR11(3)  --------->ANAC58 -------->ZAT14        --------->ARR11(3)                 --------->HSFB2a(2)    --------->ANAC46 --MYB46(3)<----------ID1------>ZmHOX2a(2)                <---------HSFB2a(2)    --------->ANAC58<---   actgtacaagaagaagacaaatggtgatctgggttcatcttcaaagctcccaattggtttcgagatattatcgatattgccactcgcaatgtacttgaac  1578400                                  <---------CCA1(2)                           <---------ATHB12                          --------->ANAC58                          --------->ANAC58                        <---------ALFIN1                       <---------ZAT14                       --------->ZAT14                             <---------GLK1(2)                       <---------ZAT18                          <---------ALFIN1                      --------->DEAR3(1)                       --------->ANAC46  <-----------GT1    --------->ANAC46                        --------->ZAT6       --------->YAB1 ->TEIL             <---------At5g28300                 --------->YAB1  <---------ZAT14 ------DAG2  <----------DOF2  --------->AtLEC2         <---------YAB1   --------->ZAT14   cttttcacttcccttcttttctcaccgcactcatgcatatcatacagagcaatcgctatcataacaccacattcttcactggaataaaaacccaaaacag  1578500                                             --------->GLK1(2)                                     --------->ARR14(2)<----------DOF2                      --------->TOE1(3)      <---------ARR14(2)            ----------->GT1   --------->GLK1(1)   ---------->DOF2        --------->GLK1(2)---------->DOF2     --------->ARR14(2)                              --------   --------->YAB1     --------->TOE2(3)      ------->TEIL     ---------->DOF2       ---------->DOF2--   agtaatcacaaatctagataaaaaccctaaagaaatctagatcgacgaatccaaaagctttgaacaaagtagcaataccattttttaaaagcgctaccat  1578600          --------->MYB52(1)  --------->ZAT2  <---------ZAT2  --------->At4g35610                              --------------------->WRI1                --------  <---------At4g35610                     <------NtERF2                                 <---------ZAT18  <------NtERF2                          --------->RAP2.6(2)                            <---------ZAT14 ->MYB46(3)                <-----------GT1<---------RAP2.6(3) --------->DEAR3(1) ----------->HVH21  < ------->At4g35610      <----------DOF2------>NtERF2 ---------->DOF2    <-----------GT1 --------->ZAT14   cggcagcacgacgaacagcttgaactcttttacgagttctcggccgaattgccattaatgcgcatcgacgattttttctatttctgacagtgaacaaaag  1578700                                                                      <---------ANAC58                                      --------->At4g35610         <------------CBF                                      <---------At4g35610  <---------ANAC55(2)                                      <---------ZAT2       <---------ANAC58                                 --------->ANAC58          <---------ANAC46                                 --------->ANAC58          <---------bZIP60(2)                                 --------->ANAC46          <---------ANAC58                              --------->ZAT14              --------->O2                              <---------ZAT18              --------->TGA1a                              --------->ZAT18          *TSS<---------TGA1a       --------->TOE2(3)                            <---------ZAT18        <---------MYB52(1) <---------ANAC46                           <---------ANAC46      <---------DEAR3(2)   <---------ANAC58     <----------DOF2       <---------ANAC58      <---------MYB46(3)  <---------LBD16     <---------GLK1(2)    --------->TOE2(3)      <---------ANAC58--------->ANAC58--------->ANAC55(2)   --------->YAB1    <---------DAG2    <-----------RAV1(1)  --------->ANAC58<---------O2     <---------AHL20(2) <-----------GT1      ===============================RAV   <---------ANAC55(1)<-----------GT1 -->DOF2 ---------->ID1  <---------ANAC46<-----------RAV1(2)   ------------>CBF<---------TOE1(3)----- -----------GT1<----------DOF2<---------ZAT14  <------NtERF2  <-----------HVH21<---------TOE2(3)<----   ttttaacctttttcgctctttactatgttgtgtgcacgagagctcaggcatcggttcgcttacgtgtcaattgcgcattttaacgataatggattttctg  1578800                                       ----------->GT1                                       --------->ANAC58                                         -----                                       <------NtERF2                                          <------          --------->MYB52(1)           --------->ANAC55(2)                                 --------->YAB1        <----------DOF2               ------>NtERF2                                       <---------YAB1    --------->ZAT18                  <---------ANAC58                                  --------->AHL20(2)    <---------ZAT18                  <---------ANAC58                               --------->AHL20(2)  --------->TOE1(2)             <------------CBF                                    <---------AHL20(2) <---------ANAC58              --------->ATHB12                                     <---------ICU4 <---------TGA1a               --------->ATHB51                                     --------->ATHB51 --------->TGA1a              <---------YAB1                                       --------->ICU4 <---------ANAC46        ----------->HVH21   <---------AHL20(2)                 <---------AHL20(2) ==================bZIP_DOF   --------->ICU4 --------->AHL20(2)       <----------DOF2  <---------AHL20(2) <---------ANAC58       --------->LBD16--------->ANAC58   <---------GLK1(1)     --------->AHL20(1) ---->At4g35610        --------->ANAC46<---------ANAC55(2)--------->GLK1(1)     --------->AHL20(2)  < -----At4g35610       <---------LBD16<---------ANAC46   <------ZmHOX2a(1)---------->DOF2<---------AHL20(2)   ctaacgtgcgcttaacagataatacgcgggacataattggcgcgtaattaaaaacagaggaaatctctcccgcttcaaagaattaattatttattataac  1578900             --------->ANAC46             --------->ANAC58                                                        --------->GLK1(1)             <---------ANAC55(2)                                                    <---------ARR14(2)             --------->bZIP60(2)                                                    --------->ARR14(2)             --------->ANAC58                                                     --------->LBD16             --------->ANAC55(2)                                                  ----------->GT1 --------->AHL20(2)                                                    --------->ARR11(3) --------->YAB1               --------->CCA1(2)                        <---------ARR11(3) ---->MYB46(3)           --------->HSFB2a(2)                    <---------YAB1  <---------LBD16 -----GT1    --------->ANAC55(1)                          --------->ICU4   <---------YAB1 ---------ATHB12   <---------ICU4                     ----------->GT1  <---------GLK1(2)   <---------ALFIN1   caataaaacttagacacgtaatcacttctaaaatatgcgaatataaaacttcaaaatggaataattttcattagatttttaatgcggaaatacacacttc  1579000                                                                          <-----------GT1                                                                        --------->YAB1                                                                       <---------YAB1                                                                    <---------YAB1                                                                   <----------DOF2               ----                                                                  --------->YAB1               ======         --------->ANAC58              --------->TOE1(2)         <---------ATHB12             <------         --------->ANAC58             --------->HSFC1(2)       --------->WOX13(1)          --------->YAB1       ---------->DOF2                <---------HSFB2a(1)    <------ZmHOX2a(2)            --------->AHL20(2)    --------->ANAC58                  <---------HSFC1(2)    --------->ARR11(3)     ------>MYB46(1)---    --------->ANAC58                  --------->HSFB2a(1)   <---------ARR11(3)     ------>MYB83------  ---------->DOF2              ---------->DOF2  <---------AHL20(2)<---------ICU4 --------->MYB46(3)   aacacaaagcaaagcaaacaaaaaaaaaacattgaaagggaccttcgaatttttttggagaagatcaatctttattatactcaccaactcaaataataaa  1579100                        --------->ALFIN1                       <-------MYC3                       <-------PIF5                       ------->MYC3                       ------->PIF5                       ------->MYC2                       <-------MYC4                                 <---------GLK1(1)                       ------->MYC4                                <-----------ARR10                       <-------MYC2                              --------->LBD16                      <---------O2                    --------->LBD16                             ---                      --------->O2                   --------->LBD16--------->GLK1(1)             ---                      <---------TGA1a                --------->ANAC58     --------->ANAC46        <--                      --------->TGA1a                --------->ANAC46   <---------At5g28300       <--  --------->GLK1(1)   <---------ANAC55(2)            --------->ANAC58  <-----------GT1     ------->GAMYB >>>>>>>>>GT-1        <---------ANAC46              <---------LBD16--------->ARR14(2)   --------->MYB52(1) ----->DAG2    =================bZIP_DOF          ------>ZmHOX2a(1)<---------ARR14(2)  <---------WRKY38(1) ===============================bZIP_DOF     <------MYB46(1)    <---------ANAC58       <---------WRKY45 ---AHL20(2)<------ZmHOX2a(1)                <------MYB83       <---------ANAC58       <---------WRKY12 -------->GT1  ---------->DOF2              <---------MYB46(3)  <---------ANAC46      --------->WRKY18(1) ---->DOF2 <----------ID1  <---------ANAC46<---------MYB52(1)  <---------LBD16       <-----------HVH21   aggtaaatccaataggaaaaagacacgtggagtagacttgaatcagttggtcctcccgcaaaccttgcggatttcaccgctactaccagtcaacgggctg  1579200                          --------->REM1(2)                          --------->ZAT14                         <---------MYB52(1)                        <-----------HVH21                                                    <-------                        --------->LBD16                                                     <-------GAMYB                       <---------ANAC46                                                    --------->DEAR3(1)                      <------NtERF2                                                       <------NtERF2                     --------->ABI4(1)                                                   ------>NtERF2                     ------>NtERF2                                                      --------->RRTF1(3)                    --------->RAP2.3(2)                                                 --------->DEAR3(1)                    --------->RAP2.3(3)                                                 --------->RAP2.3(3)                    --------->DEAR3(1)                                                  --------->RAP2.6(2)                    --------->RRTF1(3)                            --------->ANAC58      --------->RAP2.3(2)                    <---------DEAR3(1)                            --------->ANAC46     --------->RRTF1(1)                    --------->ANAC46                              --------->ANAC58     --------->ERF1                   --------->ORA47(2)                            <---------LBD16       --------->RAP2.3(1)                   --------->RAP2.3(1)                         <---------REM1(2)       --------->DEAR3(2)              --------->YAB1<---------bZIP60(1)              <---------ARR14(2)        --------->ATERF1(1)             <---------YAB1 --------->bZIP60(1)              ------->TEIL             <---------At4g35610 <-----------GT1   --------->DEAR4(2)                        --------->ARR14(2)      <---------ARR14(2) ------>GLK1(1)    --------->ATERF1(1)              <-----------RAV1(1)              --------->ARR14(2) ------>bZIP60(1)  --------->ERF1 <---------ZAT6    <---------MYB46(3)           --------->At4g35610 -------GLK1(1)   <---------ATERF1(1)             <---------GLK1(2)  --------->SPL7---------->DOF2  < -------bZIP60(1)--------->DEAR3(1)   ---------->DOF2       <---------CCA1(2)    <---------At4g35610-   atatcacccatttttatcatcgccgccgtgaagtcagagttaaagctcgacggattgttgctgtatccacggacgatggagtcagtagagccgccgttga  1579300  Previous    Next  AGI:  At5g05330.1    Description:  DNA binding. similar to HMGB6 (High mobility group B 6), transcription factor [Arabidopsis thaliana] (TAIR:AT5G23420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN84129.1); contains InterPro domain High mobility group box, HMG1/HMG2; (InterPro:IPR000910); contains InterPro domain High mobility group box, HMG (InterPro:IPR009071) Range:  from: 1576983    to: 1578755    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g05340.1    Description:  peroxidase, putative. Identical to Peroxidase 52 precursor (PER52) [Arabidopsis Thaliana] (GB:Q9FLC0); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT5G58400.1); similar to Peroxidase P7 (TP7) (GB:P00434); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 1578952    to: 1580876    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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