Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           ------>ZmHOX2a(2)                                                        <---------GLK1(1)                                                        --------->GLK1(1)                     --------->ICU4                     <------ZmHOX2a(2)                   --------------->AGL15               --------->AGP1                   <---------------AGL15               <---------ARR14(2)                  ----------------->AGL2               --------->ARR14(2)                <---------ATHB12                  <-----------------AGL3               <---------ARR11(3)              --------->WOX13(1)                  ----------------->AGL1               <---------AGP1          --------->ANAC58              ---------->DOF2         ------->GAMYB    <-----------ARR10       --------->ANAC58             <---------ATHB12      ----------->RAV1(1) --------->ARR11(3)      --------->ANAC46           --------->WOX13(1)   --------->TOE1(3)     <---------CCA1(2)       ------->GAMYB     -----         <---------ATHB12       --------->TOE2(3)     --------->At4g35610    <---------ALFIN1   ----- --------ATHB12   ----------------->AGL3         <---------GLK1(1) --------->ANAC46  <---------ATHB12   aatcaagtcgaatcaatgaagccaaaattagaaacctcaacagaaaatttgaaatcagatctctccaatacacaattcaacacccaaatcaatcaatttc  1535000                                          --------->ANAC58                                    --------->ICU4                                    <---------YAB1                                  --------->YAB1                 <-----------------AGL1<---------REM1(1)            ------>ZmHOX2a(1)  --------->YAB1                        --------->ARR14(2)    ----------     <---------YAB1          ----------->GT1                         <---------ARR14(2)   <----------     <---------AHL20(2)    <--------P-------->HAHB4              <---------LBD16 --------->ARR14(2)     --------->AHL20(2) <---------TOE2(3) --------->ANAC58       --------->LBD16 <---------ARR14(2) ---------->AtSPL3     --------->DAG2--------->YAB1           --------->SPL7 <---------LBD16 ---------->AtSPL8    ---------->DOF2<---------ICU4    ---------->DOF2      ------>ZmHOX2a(1)    ----   agtacatataattcctgatttcgataaaggtaagtataatgatgaagcaagagtcaaaaaagcataccgcggtttctccttcggattccatttgtcactt  1535100                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                  --------->CCA1(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)                                                                                --------->GLK1(1)                                                                                <---------GLK1(1)                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                        =============HOX2a_HOX2a                                                                        --------->CCA1(2)                                                                       <---------ARR11(3)                                                                       --------->ARR14(2)                 --------->O2                    --------->YAB1        <---------ARR14(2)                 <---------O2    <---------ARR14(2)                    --------->ARR11(3)  <---------ANAC58               <-----------ARR10                     <---------AGP1  <---------ANAC58               --------->ARR14(2)                    --------->AGP1--------->LBD16  <---------ANAC46--------->TOE1(2)             <---------YAB1       ----------->ARR10     <---------TOE2(3) >ID1           <---------HSFC1(2)            --------->YAB1    <---------YAB1 ----------->ARR10 -HVH21  <---------ALFIN1 ----------->GT1    --------->ICU4    <---------------------WRI1---------->DOF2 ----->MYB52(2) --------->HSFC1(2)      ------>ZmHOX2a(2)    --------->TOE1(2)<------ZmHOX2a(1)------   agttgcttccaacaccgaaacgtcggaatagttcaaatctgatcggaattatcaaaaacagaaactacgattagatctgaggagatccgagtaaaggaag  1535200                                                                    <---------ANAC46                                                                  --------->ZAT14                                                               <---------ANAC58                                                               <---------ANAC58                                                     ------>ZmHOX2a(2)                                                    --------->CCA1(2)                                                    <------ZmHOX2a(2)                                                    --------->At4g35610    ----------->HVH21                                                   <---------ARR11(3)    <---------bZIP60(1)                                                   --------->ARR11(3)    --------->bZIP60(1)                                                   --------->AGP1 <---------ZAT14                 <---------YAB1                    <---------AGP1--------->ALFIN1               --------->YAB1 <---------ZAT6       --------->ARR14(2)    <---------bZIP60(2)              <------ZmHOX2a(2)                    <---------ARR14(2)    <---------O2 --------->ARR14(2)           ----------->GT1    ----------->ARR10--------->ZAT18 <---------ARR14(2)  <---------ZAT6     <----------DOF2        <---------ANAC46       ------->TEIL ----->GT1   --------->ARR11(3)    ---------->DOF2<---------GLK1(1)--------->ALFIN1  <---------GLK1(2)   tcaaatctgagaatggatcatgagtgtaagaagagttaaaagctttaccatgagatctgaagatggagtgtggtgatgtgactctctgaatctctctcaa  1535300                                                        --------->GLK1(2)                                                        --------->ARR11(3)                                                        <---------ARR14(2)          <----------DOF2                               --------->ARR14(2)    ------>ZmHOX2a(2)                                   <-----------ARR10               --------->ANAC58   <------ZmHOX2a(2)          ----------->GT1       <------ZmHOX2a(1)                   --------->ANAC58  <---------ARR14(2)<---------ZAT14     <------ZmHOX2a(1)                       ---------->DOF2  ----  --------->ARR14(2)--------->ZAT14   <---------TOE2(3)<---------GLK1(2)      <-------TEIL     ------   tctggatccaagctttcttctctacagagagatagtttataaggaagacgaagaggagaatcttgggatggctaagaagatgcaaagagcaagctatttg  1535400                                                                                        ------->GAMYB                                                                                        --------->At1g77200                                                                                        --------->DREB2C(2)                                                                                        ----------->HVH21                                                                                        --------->DEAR4(1)                                                                                        <---------ETT(1)                                                                                        --------->DEAR3(1)                                                                                  --------->DEAR3(1)                                                                               --------->AtMYB61                                       <---------ARR11(3)                   ------->GAMYB                                       --------->ARR11(3)                   --------->AtMYB61                                       <---------AHL20(1)                  --------->MYB46(3)                                    --------->AHL20(2)                    -------->P --------->AtMYB61                                  --------->AHL20(2)                    <---------MYB111(1)                                  <---------AHL20(2)                    <---------MYB111(2)                                  <---------YAB1                        <---------MYB55(2)                                 --------->TOE2(3)                 --------->ANAC58  <---------ALFIN1                       <---------RVE1(1)                           --------->ANAC46  --------->DEAR3(1)                      <---------ARR11(3)                           ------>MYB83<---------ALFIN1                      <---------ARR14(2)     <-----------HVH21     ------>MYB46(1)<---------ALFIN1                      --------->ARR14(2)<---------AHL20(2)         --------->AtLEC2 <---------MYB55(2)                      <---------GLK1(2)--------->AHL20(1)          --------->ANAC58 --------->MYB46(3)                    --------->LBD16 <---------AHL20(2)           ------->GAMYB --------->DEAR3(1)         <-----------TGA1      --------->AHL20(2)               --------->MYB46(3)--------->AtMYB61         <-----------HVH21     <---------AHL20(2)               <---------ATHB12 --------->MYB46(3)        --------->bZIP60(2)    --------->AHL20(1)              ------>MYB46(1)--------->MYB46(3)        --------->ANAC46    --------->AHL20(2)        --------->YAB1    --------->MYB46(3)  ------>ZmHOX2a(1)<---------HSFB2a(2) <---------AHL20(2)      -------->P------->GAMYB --------->DEAR3(2) ------>ID1    *TSS--------->HSFB2a(2) --------->AHL20(2)      ------>MYB83<---------MYB55(2) ----------------->TaNAC69(2)  <---------AHL20(1)    <---------ATHB12   <---------MYB52(2)   tctcctctactcgtcactcttccagatttttaaaatattaatatatttgtcacaaatcataatccaaccaagcaacaaccaccaccaccaccgacaactt  1535500                                                                                        --------->ARR11(3)                                                                                        <---------ARR11(3)                                                                                        <---------AHL20(2)                                                                                ------>ZmHOX2a(1)                                                                               --------->TOE2(3)                                                                               --------->TOE1(3)                                                                            <---------ARR11(3)                                             ----------->GT1                --------->ARR11(3) ------                                     --------->At5g28300                   --------->RVE1(1)  <------                                 <---------MYB46(3)   --------->RAP2.6(3)  --------->CCA1(1)---------                            <---------At5g28300----------->GT1      <----------DOF2     --------->AHL20(2)                    <---------At5g28300     --------->DAG2         --------->TOE1(3)    <---------AHL20(1)                   <-----------GT1  ----------->GT1  --------->MYB52(1)--------->AHL20(2)  <---------AHL20(2)            <-----------GT1<-----------GT1 ---------->DOF2         --------->TOE2(3)    --------->AHL20(1)   ccacagtcgatttttttctagttacagttttacagtggctgtaaaaaaagtgaaaaaacggccgataaacctttaaaatatccttagaaatatattatca  1535600                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                <---- --->YAB1                 <---------WOX13(1)                                               <---------ANAC46 ---YAB1             --------->YAB1                                                     --------->ALFIN1 >YAB1         --------->YAB1           <---------ZAT6      --------->ALFIN1   --------->YAB1 -------   tcgaattagtgactaaatcaaaatagtaattgatatttgatagtgatataactaaaatagaagtgtgaagaacacaacaaatcacaagtagtggggtaaa  1535700            <---------MYB52(2)                                                     --------->MYB52(1)        <-----------HVH21                                                      --------->WOX13(1)        <-----------TGA1                                                      <---------AHL20(2)   <-------TEIL                                                               --------->AHL20(2) -------->GLK1(1)                                 <---------RAP2.6(3)     <---------AHL20(2) --------ARR11(3)                                 ----------->RAV1(1)     --------->AHL20(2) ------->ARR14(2)                                <---------ETT(1)       --------->TOE2(3) ------->ARR11(3)                          <---------ARR14(2)         --------->AHL20(1) --------ARR14(2)                          --------->ARR14(2)         <---------AHL20(1) ----ZmHOX2a(1)                        --------->DAG2   --------->YAB1<---------ARR11(3) -----TOE2(3)    <----------DOF2 --------->TOE2(3)------>NtERF2       --------->AHL20(2) --->DOF2   <------------MYB.PH3(2)   ---------->DOF2   XXXXXXXXXXXXXXXXXXXX>MIR829.2             <--   ggatattcatcgtcactaactttcttacagataaaacttaaaaagtatttgccgacaaaaataaaacttcaaaatattaattaatcaacggattagtcca  1535800                  --------->YAB1             --------->ARR11(3)             --------->AHL20(1)             --------->AHL20(2)             <---------AHL20(2)             <---------ARR11(3)             <---------AHL20(1)                                           --------->AHL20(2)            --------->AHL20(2)                                        ----------->GT1       --------->YAB1                                               --------->At4g35610    --------->WOX13(1)                                             ------>NtERF2   <---------AHL20(2)                                           --------->At4g35610               ---  --------->AHL20(2)         <----------DOF2                    --------->ZAT2 ---------->DOF2   <--- -------ATHB12   <---------YAB1               --------->YAB1   --------->MYB52(1)        --------->ZAT6   atgaataaatcaaaatatattgatagtgatgctttacttactagtatatcaaaataggctaaaaccagcgggctgaaaaaataaaggtccaactctagta  1535900  Previous    Next  AGI:  At5g05170.1    Description:  CESA3 (CELLULOSE SYNTHASE 3); cellulose synthase/ transferase, transferring glycosyl groups. Identical to Cellulose synthase A catalytic subunit 3 [UDP-forming] (CESA3) [Arabidopsis Thaliana] (GB:Q941L0;GB:O48948;GB:Q9FHK6); similar to CESA1 (CELLULOSE SYNTHASE 1), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G32410.1); similar to CESA10 (CELLULOSE SYNTHASE 10), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G25540.1); similar to IRX3 (IRREGULAR XYLEM 3, MURUS 10), cellulose synthase [Arabidopsis thaliana] (TAIR:AT5G17420.1); similar to CesA2 [Acacia mangium] (GB:AAT66941.1); similar to Range:  from: 1530175    to: 1535415    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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