Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ==============================HOX2a_HOX2a        <----------DOF2 ---------ALFIN1                                     <-------GAMYB -------->RAV1(1)                                   <---------MYB46(3) --->ANAC58                                     <---------TOE1(3) --->bZIP60(1)                              --------->TOE1(3)                                     --- --->ANAC58<---------ANAC58                 --------->TOE2(3)                                     <-- --->ANAC46<---------ANAC58             <---------WRKY38(1)     --------->ETT(2)            <-------- ----bZIP60(1)                          <---------WRKY12      --------->ZAT14               --------- --->ANAC55(2)                         --------->WRKY18(1)    --------->REM1(2)          --------->AtMYB61 ----ANAC55(2)  <-------TEIL          <--------ZAP1 --------->MYB111(2)                  <---------ALFIN1 -->HVH21  <---------ANAC46           <-----------HVH21      --------->ALFIN1           --------->MYB46(3) -->TGA1------>ZmHOX2a(1)      <------ZmHOX2a(2)<---------TOE2(3)                     <------ZmHOX2a(1)   caacacagtcctttcgggttcatgagggtttcgatcacacggtcaaccttaaggttgttgaaagtgtagacatagatgttttgtttcaggaccaccacaa  1525800                                                  <----------CDC5                                               --------->ZAT18                                             --------->ZAT2                                             <---------At4g35610                                             --------->At4g35610                                           <---------ZAT18              --------->YAB1              - ---->MYC3                                 --------->ZAT18              <---------ICU4          <---- -----MYC3                            ---------->DOF2     <---------At4g35610  --------->MYB52(1)   < -ALFIN1                       <---------YAB1<---------ZAT2            <---------ATHB12     <<<<<<<<<MYB98 >AtMYB61        <---------At5g28300<---------AHL20(2)    <------NtERF2--------->ICU4   <----------DOF2   cgtgttctctcgctagtttcacagcgataacttctgatttaaaagtgagctcgctgaggcagcaatttcggtaatcatcccaaacgaatactttgttagg  1525900                                                                                                  <--                                                                                                <----                                                                                              -------                                                                                              -------                                                                                           <---------SPL7                                                                                          <---------PCF2                                                                                        --------->LBD16                                                                                        <---------ANAC46                                                                                       <---------ANAC58                    <---------ICU4                                                     <---------ANAC58           ----------->GT1     ---------->DOF2                                         --------->ALFIN1     --------->ANAC46        --------->MYB46(3)                      <----------DOF2  <---------LBD16    <---------LBD16 --------->ATHB12                            <---------At4g35610<---------ANAC46 -------->ZAT18    <---------YAB1                          --------->At4g35610     <---------ANAC58 --ZmHOX2a(1)<---------YAB1----------->RAV1(1)            <-----------ARR10        <---------ANAC58<- ---------ZAT18  <-----------GT1               ---------->DOF2 --------->ANAC46 <---------GLK1(2) ---   agggtactcggaattgttataaccattgccaacaaaagcgaataagttagaaaggaagagcatctcagcaactttgaagcctgattcgtgcggggcacgg  1526000         <----------DOF2    <----------DOF2   <---------ANAC58   <---------ANAC58 -------MYB46(3)                                                                            <-------- -----At4g35610           <---------At4g35610                                         --------->ANAC58 -->ANAC58    --------->ATHB12    >>>>>>>>>EIN3        --------->TOE1(2)    ----------->RAV1(2) -->ANAC58   <---------YAB1      <-------TEIL --------->ATHB12     --------->AtMYB61  --------->ANAC46 --------At4g35610        --------->At4g35610<---------MYB52(1)   --------->MYB46(3)  --------->ANAC58 -------->HVH21   <---------MYB46(3)       ----------->GT1<---------ATHB12 <---------ARR14(2)--------   ctgatgcttttctttatcattggtttgcagctatatacattgaaaccgtgatttgttccaacgatgaaaccactgcatacctggttccaagctactgata  1526100                              --------->At5g28300                             ----------->GT1                            --------->ALFIN1                           <-------PIF5                           ------->MYC2                           <-------MYC2                           ------->PIF5                        <---------TOE1(3)                           <-------MYC3                   ----------->GT1                          <---------TGA1a             ---------->DOF2                          --------->TGA1a         ------>ZmHOX2a(2)                          <---------O2           <------ZmHOX2a(2)                          <---------bZIP60(2)   --------->ARR11(3)                          --------->O2          <---------ARR14(3)      ----------->HVH21                          <---------ANAC55(2)   --------->AGP1 <---------TOE2(3)                     --------->REM1(1)          --------->ARR14(3)     --------->ANAC46            <----------DOF2------->MYC3         --------->ARR14(2)     --------->ANAC58            <---------DAG2--------->ANAC55(2)   <---------ARR11(3)     --------->ANAC58      --------->ANAC58    =======================================bZIP_DOF      --------->ZAT14      --------->ANAC58    <---------ANAC46      <---------ARR14(2)    --------->LBD16 -ZAT6--------->ANAC46   ------------>OsbHLH66  <---------AGP1 <---------YAB1 --------->ALFIN1 ->YAB1     ========================bZIP_DOF   <---------CCA1(2)      <---------LBD16   acaccttcaagtcactttttgcttcatcacgtggtgaatcgaaagtttcagatcttgaaagcgttaagattccacggacagtggagacaatcgaattcat  1526200                                                                                        <------------CBF                ------>MYB46(1)                                                  <---------MYB52(1)                ------>MYB83                    <----------DOF2                <---------MYB46(3)    <----------DOF2   --------->ANAC46   ------------>CBF                 ---------->DOF2   <--------   tcttctcttttccaaaccaaattcacagaagaaaaaccgaagagacaatactttagaatatcaaacgcttctcatgaaaagtcgttgggaaattgatgtt  1526300     ----------->GT1--------->ANAC46                                                    <---------YAB1     <------MYB83   --------->ANAC58                 ---------->DOF2                   <---------AHL20(1)     <------MYB46(1)--------->ANAC58           --------->ARR14(2)                      --------->AHL20(1)    --------->MYB46(2)           <---------------AGL15                                 <---------AHL20(2)    <---------MYB46(3)           ------>ZmHOX2a(1) <------ZmHOX2a(1)                   --------->AHL20(2)    --------->MYB59 --------->ANAC55(1) <---------ANAC58                         <----------DOF2   <---------MYB55(1)           --------->TOE2(3) <----------ID1                 --------->TOE2(3)  <---------MYB52(1)----------->GT1     <---------ANAC58                   <-----------GT1         <- -TOE2(3)  <---------AHL20(2)<---------ARR11(3)<---------ARR14(2)     ----------->TBP --------->YAB1-   tatcgtttggtaatttatacacaggtaacaaaatcctaaatagagtgcgaataggaaaagacttcaaaccatatatatcacatctttaatataatacgtt  1526400                                                        <---------At4g35610                                                        --------->At4g35610                                                --------->ANAC58           --------->YAB1                       --------->ANAC46           <-----------GT1          --------->AHL20(2)                    --------->ANAC58  <------------CBF       <---------AHL20(2)    <-----------ARR10  --------->bZIP60(2)   <---------ANAC46      --------->AHL20(2)     <---------ARR11(3) <---------O2     --------->ATHB51 <---------AHL20(2)      <---------AHL20(2)     --------->ARR11(3) --------->O2     --------->YAB1   --------->AHL20(2) --------YAB1                --------->GLK1(2)  --------->TGA1a <---------YAB1   --------->AHL20(2)<- -------->YAB1        --------->TOE1(2)       <---------ALFIN1--------->YAB1<<<<<<<<<GATA-1    ------   tatgaaaattaaataaaaatcaaacctagaaaatctcattacaaaactccacgtcttcatctaactataattgtgtttatctatttaattttgtttaaaa  1526500        <---------AHL20(2)                                  <---------------AGL15       --------->AHL20(2)                                   --------------->AGL15     --------->TOE2(3)                                   <-----------GT1                          --- <---------GLK1(1)                                    <---------ICU4                        <-------- --------->GLK1(1)   --------->CCA1(2)                ------>MYB46(1)                    ------>MYB83 -----ZmHOX2a(1)  ----------->GT1  --------->WRKY18(1)------>MYB83    --------->CCA1(2)  ------>MYB46(1) ---->DOF2  --------->TOE2(3)     <--------ZAP1     <---------MYB59  --------->ARR11(3)<---------MYB59   aggatttcattaaatctaaatggatacaaagttttcggtcaaaaaaaaactagacctaattacaaattatagatatagattgaacttaacctactcatgg  1526600                                                                         --------->MYB46(3)                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                     <------NtERF2                                                  --------->GLK1(2) --------->RAP2.6(2) <---------ANAC46            ------>ZmHOX2a(2)   <---------GLK1(2)<---------At4g35610 -------->HVH21      ----------->HVH21--------->YAB1         <----------DOF2 <---------ATHB12 -ICU4     ------->TEIL <---------WOX13(1)    --------->HSFB2a(2) --------->At4g35610           <----   ctgacttgaaacgaatgtggaatgtgactgatccttgtaatcaaacttgtagaatctctgaagcttttagcggcaaccaatgactcatcgatgagacatt  1526700  Previous    Next  AGI:  At5g05150.1    Description:  AtATG18e (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) e). similar to AtATG18d (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) d) [Arabidopsis thaliana] (TAIR:AT3G56440.1); similar to Os01g0168500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41323.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 1524842    to: 1526200    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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