Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <-----------GT1                                               <---------ARR11(3)                                  --                 --------->ARR11(3)            --------->ARR11(3)     --------->DAG2               <-                 <---------ARR11(3)       ------>ZmHOX2a(2)          ---------->DOF2               --             ---------->DOF2            --------->AGP1           --------->MYB59                   --          --------->LBD16               --------->ARR11(3)  --------->ATHB12                       --         <---------LBD16                <---------AGP1      <--------ATHB1             <-------------        <---------LBD16                <---------CCA1(2)   <---------YAB1        --------->TOE2(3) --   --------->ANAC58         ---------->DOF2   <---------CCA1(2)  <---------TOE2(3)     --------------   --------->ANAC46        --------->YAB1<------ZmHOX2a(2) --------->ICU4      --------->GLK1(2)   --   --------->ANAC58       <---------YAB1<---------ARR11(3) <---------ATHB12   <---------GLK1(2) <----   taaacaagaaaccgggaaagatgttcttatcaaagtgatttagatcttatatctccatacaatgatttaggtaaagctaagaatcttagatggtactctt  1496500                                   <------NtERF2                                  <---------RAP2.3(1)                                  --------->LBD16                                 <---------RAP2.3(2)  --------->MYB52(1)            --------->RAP2.6(3) ----------->HVH21           <---------ANAC58 ------->ANAC55(2)           <---------ANAC58                                    <---------AHL20(2) --------ANAC55(2)         <---------YAB1                                        --------->AHL20(2) ------->ANAC55(1)        <-----------GT1                                       <---------AHL20(1) ------->ANAC58         <---------AHL20(2)                     --------->ATHB12 --------->AHL20(2) ------->ANAC58    <---------AHL20(2)                      --------->ATHB12     <---------AHL20(2)  - --AtSPL8          <---------AHL20(1)                      --------->ATHB51     --------->AHL20(1)  - ------->O2        --------->AHL20(1)                      -------->ATHB1  ------>ZmHOX2a(1)        < ->AtSPL8         <---------AHL20(2)                      <---------YAB1------>ZmHOX2a(1)          -- ------->ANAC46   --------->AHL20(2)<---------ALFIN1  <<<<<<<<<GATA-1 ------>ZmHOX2a(2)          ---- -----REM1(2)     --------->YAB1<---------LBD16   <----------DOF2<---------WOX13(1)     ----------->GT1   cacgtaacagagacatcaaattatattttatccttgcggcacttcttcaattctttatctattattgattgatcctcctaaatttattttcagtaaaaaa  1496600            ------>ZmHOX2a(1)            --------->LBD16            <---------HSFB2a(2)            --------->HSFB2a(2)           <---------LBD16        --------->GLK1(2)        <---------ARR14(2)        --------->ARR11(3)        --------->ARR14(2)          --------->AHL20(2)       --------->GLK1(1)            <---------AHL20(2)                                 <------MYB46(1)    --------->LBD16                 --------->AHL20(1)     --------->ANAC58            <------MYB83 -------->GLK1(2)                  <---------AHL20(2)      --------->ANAC58           <---------AtMYB61 -------->ARR14(2)               --------->YAB1           <-----------------------TaNAC69(2) ---------ARR14(2)         <------ZmHOX2a(1)             --------->CCA1(2)         --------->ATHB12 ------->RVE1(1)          <----------ID1      ---------->DOF2    ---------->DOF2   <------ZmHOX2a(1) ----->AHL20(2)      <---------YAB1--------->AHL20(2)   <----------ID1     --------->AtLEC2   aaaatccgaaaatcctggaaactattagaggacaaaaataatttgttagaaagagagagagacgaaacaaagactgcatgcagaaggattggtttgcatt  1496700                                                           --------->ANAC46                                                      <---------ARR14(2)                 ------>MYB83                                                      --------->GLK1(2) --------->AHL20(2)                           --------->AHL20(2)         --------->ARR14(2)<---------AHL20(2) <---------ATHB12                       --------->ANAC58              <---------GLK1(2)<----------DOF2    ------>MYB46(1)      --------->ANAC58 --------->ANAC58     --------->AHL20(2)        --------->TOE2(3)<---------MYB59      --------->ANAC58 ----------->GT1 --------->AHL20(2) --------->LBD16      <---------At4g35610   ggattattaagcaaaaaaaaaaaacaagaaaaaatacagaataaaaaaaaatacagaatccccaaaacccatctttaatttggctgataccaaatcaaaa  1496800                                                 --------->LBD16                                                <---------HSFB2a(2)                                                --------->HSFB2a(2)                                        <---------DAG2<------ZmHOX2a(1)                                        <----------DOF2                           --------->GLK1(2)    <---------ANAC46                 <------ZmHOX2a(1)                          <---------GLK1(2)    <---------LBD16                  ----------->GT1            <---------HSFB2a(2)      <---------ARR11(3)                        <---------TOE2(3)            --------->HSFB2a(2)      --------->ARR11(3) *TSS             <---------GLK1(1)   aaacttgagaatttctgaaactcagatagaatctttgaagaactttttttgcggaaggacaggcttcatgtatgggtttctgaggaaaaacaaaaaatgc  1496900                                                                    --------->RAP2.6(3)                                                                   --------->MYB52(1)                                                                  ----------->HVH21                                                                --------->YAB1                                                           <---------GLK1(2)                                        <---------ANAC58   --------->ARR14(2)                                        <---------ANAC58   <---------ARR14(2)<<<<<<<<<TBF1                                   --------->ATHB12     --------->YAB1------>NtERF2              <---        <---------KAN4(2)         <-------TEIL         <---------YAB1<---------RAP2.6(2)      ------>ZmHOX2a(1)   agagggagagaatgagcaagaagaagattagtcaagttcattgcattccctctggtgatcatattctcatgacggcttcttcttccaaacacattcctca  1497000                                                                               --------------->AGL15                                                                               <---------------AGL15                                                                              ----------------->AGL3                                                                           <---------WOX13(1)                                                                         <--------ATHB1                                                                         <------------ATHB5                                                                         --------->YAB1                                                                         --------->ATHB12                                                                         <---------ICU4          ---------->DOF2                                                -------->ATHB1            <-    --------->GLK1(2)                                                   <---------ATHB51           <-   --------->ARR14(2)               --------->ARR11(3)                  --------->ICU4          <----   <---------GLK1(2)          ----------->GT1<----------DOF2            <---------YAB1      <--------   <---------ARR14(2) ----------->GT1<---------YAB1                     <---------ATHB12   <---------ANAC58 ------CCA1(2)  <---------HSFB2a(2) <---------ARR11(3)               ------------>ATHB5    <---------ANAC58   tatcagattctacaaagcctggaagggtaacaacgtaatatcattttctttcttctctgtaaacacatttctcaatgattgccaatataagatgctttct  1497100                       <---------AHL20(1)                        <---------AtMYB61                       --------->AHL20(1)                     <---------AtMYB61                       <---------AHL20(2)                     --------->ALFIN1      <---------HSFB2a(2)                                   <-----------RAV1(1)      --------->HSFB2a(2)                            <---------ARR11(3) --------ANAC58       <---------AHL20(2)             <---------GLK1(2) --------ANAC58       --------->YAB1                 --------->ARR11(3)                     ------->TEIL ------DOF2           --------->AHL20(2)       <---------At4g35610<---------MYB46(3)  ------>ZmHOX2a(1) --DOF2       ----------->GT1        <----------DOF2<---------RVE1(1)        --------->ATHB12      --   ttcttgttccacaagaatgtgaaattatattttgtttttcttttgtttcatcagagattttgctgtggtggtagactaatctttggtcctgatgtatcat  1497200                                                                                  ------>ZmHOX2a(1)                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                              <---------ARR14(3)                                                                              --------->ARR11(3)                                                                             <---------GLK1(1)                                                                             --------->GLK1(1)              ------>ZmHOX2a(1)                                   <------ZmHOX2a(2)       ------>MYB83--------->ATHB12                               =======================HOX2a_HOX2a       --------->MYB52(1)      ------>ZmHOX2a(1)                  ================HOX2a_HOX2a       ------>MYB46(1)       ----------->RAV1(2)              --------->ALFIN1<---------ARR11(3)     <---------MYB46(2)   <---------GLK1(1)                 <---------ANAC46----------->ARR10     <---------MYB52(2)   --------->GLK1(1)         =====================HOX2a_HOX2a     <---------MYB59      --------->At4g35610       <------ZmHOX2a(1)      <------ZmHOX2a(1)     <---------MYB111(1)  <---------At4g35610       ===================================HOX2a_HOX2a   ------->TEIL   <---------YAB1                    ==================================HOX2a_HOX2a ------------->AtSPL8<---------WOX13(1)           <---------TOE2(3)  ---------->DOF2   ctctgtacctaacctccttcttgattggagctcctgcgcttacattctgcataaggatgctcgtgtggatcaaaagaggagatcctttcttcaactatac  1497300                                                                                  --------->ANAC58                                                                           --------->YAB1                                                                           <---------ICU4                                                                       <------ZmHOX2a(1)                                                                     --------->LBD16                                                                    <---------LBD16                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                     --------->bZIP60(1)  <---------HSFB2a(1)                                                <---------ICU4   <---------ARR14(2)                                              <---------TOE2(3)  --------->ARR14(2)                 <                     <---------ALFIN1 <---------ANAC58    --------->ZAT2  --------->HSFC1(2)       <-                    ------>ZmHOX2a(1) <---------ANAC58    <---------ZAT2  --------->HSFB2a(1)      --           <------ZmHOX2a(1)          --------->ANAC55(2) --------->At4g35610     --------->ANAC58<--        <-----------RAV1(2)          <---------TOE2(3)    <---------At4g35610     --------->ANAC46---  >>>>>>>ZML2   <-----------GT1     <-----------GT1  <---------bZIP60(1)  <---------HSFC1(2) --------   cgttctagcttcaggatttatcctcaccctcttggattttacgtttctaatgttgacatcagctagggatccaggaatcatcccaaggaacaaaacatca  1497400  Previous    Next  AGI:  At5g05070.1    Description:  zinc ion binding. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT2G40990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18287.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 1496856    to: 1498545    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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