Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ------>ZmHOX2a(1)                                                                        --------->TOE2(3)                                                                     <---------ARR14(2)     <---------TGA1a                             <---------ANAC55(2) --------->ARR14(2)   <------NtERF2                                 --------->ANAC55(2) --------->GLK1(2)     <---------WRKY12 <---------ANAC46                             <---------ATHB12      <---------GLK1(2)    <-----------HVH21 ->TEIL--------->ALFIN1                --------->ZAT14           --------->YAB1  <---------ZAT14 -MYB52(2)                             <---------ZAT14      --------->ARR11(3)  ------>ZmHOX2a(1)   atggcgcaagtgggcataccaaaaactaataacttaagcactaaactaatcaagtattgagagataatcagaatcctaaatcctgaactggggtcaaatg  1476200                                                                              ----------->RAV1(2)                                                                             ------>MYB83                                                                             ------>MYB46(1)                                               ---------->DOF2               -------->P                                          <---------------AGL15              --------->MYB52(1)     <                                         ----------------->AGL3             --------->MYB55(1)      <                                         ----------------->AGL2            <---------MYB59          <  <---------AHL20(2)             ----------->GT1   ---------->DOF2         <---------MYB46(2)      <-  --------->AHL20(2)       --------->ZAT18--------------->AGL15         <-----------GT1 <---------ZAT6   ccaatttatcaaatgagcatacttctaagtggacgaagtgaaaaccagataaagaaagaaaacgagagagagagtaacctacctgagctagagttactag  1476300             <---------LBD16             --------->ATERF1(1)             <------NtERF2            ------>NtERF2            <---------ATERF1(1)           <---------DEAR3(1)           --------->DEAR3(1)         <-----------HVH21     --------->KAN4(2)    --------->HSFB2a(1)    --------->KAN4(1)    <----------TaMYB80    <---------HSFB2a(1)    <---------GLK1(1)    <---------KAN4(1)    --------->GLK1(1)   <-----------ARR10         --------->TOE2(1)   --------->ARR11(3)        --------->TOE1(1)   --------->ARR14(2)   ------>NtERF2   <---------ARR11(3)  --------->WRKY38(1)   <---------KAN4(2)   --------->WRKY12   <---------ARR14(2)  ----------->HVH21   ---------->TaMYB80--------->At4g35610                                       <---------WOX13(1)  <------NtERF2      <---------At4g35610                                      <---------ANAC58 --------->LBD16  --------->ARR14(1)                                         --------->ATHB12 ---------ANAC58 --------->ARR14(2)                                        <---------WOX13(1) ---------ANAC46 <---------GLK1(2)                <<<<<<<ZML2            --------->ATHB12 ---------ANAC58 <---------ARR14(2)    --------->AHL20(2)      <----------DOF2<---------ANAC58 --------LBD16 --------->LBD16 <---------CCA1(2)  <---------AGP1        <---------YAB1    --------->TOE2(3)   tggcggatattcgtcgccggattcgctgacctcgtatcaaattaaaaccctagaactgaaattgacttttgaagatgattgattgctacaaatctcaata  1476400                                                        ------------>CBF                                                     --------->ZAT18             <----------DOF2                         <---------ZAT14   ---------->ID1          *TSS                                       --------->At4g35610  <----------DOF2        --------->KAN4(2)                       <---------DEAR3(2)   <-----------GT1      <-------TEIL                            <------NtERF2       ------->TEIL  <---------------AtSPL8    --------->LBD16 --------->ETT(2)      <---------ARR14(2)  --------------->AtSPL8   ------->GAMYB    <---------ANAC58      --------->ARR14(2)  --------------->AtSPL3<-----------GT1     <---------ANAC46----------->HVH21 ---------->DOF2--------->YAB1              <---------ANAC58<---------ATHB12   catgaaagtacattcctttcaaaattcaaccggactaaaccgaatgtcgtcggtctgcaccaatgacgaatttgcccttttggcattttttcttccattt  1476500            ------------>CBF            <---------------AGL15           <-----------------AGL1                                                      <------ZmHOX2a(1)           ----------------->AGL1               ====================HOX2a_HOX2a     *TSS   <---------AHL20(2)           <-----------------AG                 ------>ZmHOX2a(1)                --------->ANAC46        <---------GLK1(1)                    ---------->ID1                      --------->ANAC58       ---------->DOF2                   <---------ANAC55(2)     <----------DOF2 --------->ANAC58     <------MYB46(1)                     --------->ANAC55(2) =================================HOX2a_HOX2a     <------MYB83   <------ZmHOX2a(1)    <---------ANAC55(1) ------>ZmHOX2a(2) --------->ANAC58   <--------P    --------->YAB1          <---------ANAC58  --------->ARR14(2)  <---------ALFIN1  <-------GAMYB <---------ATHB12  <-----------RAV1(2) <---------ANAC46         --------->ANAC46  <---------ANAC46<---------TOE2(3)      <---------ANAC58  <---------ARR14(2)  --------->ANAC58   actgggttggaaagcccaataaggaactgaaacggcccagattacttgtccttgttttgtggatcgtcttttctctaacacacacaccaggatttaatct  1476600                            <---------ANAC58                            <---------ANAC58                       <------NtERF2                     <---------DEAR3(1)      ----------->GT1     <------ZmHOX2a(2)                 <-----------GT1     >>>>>>>>>TBF1     <---------At4g35610            <----------DOF2<---------ZAT2--------->GLK1(2)  ------>ZmHOX2a(1)   gagactcgtttcatcttttttactcggcgagcttgtgaagaagaaactggtgatttcatctccttcgatcactcccaaggtatcgtcttgttctctcgct  1476700                                                                             <--------HAHB4                                                                             --------->ATHB51                                                                             <---------ICU4                                                                            <---------YAB1                                                                       ------>ZmHOX2a(2)                                                                       ==============================                                                                       ==============================HOX2a_HOX2a                                                                      <---------GLK1(1)                                                                      --------->GLK1(1)          ----                                                                     <---------ARR11(3)          ====                                                                     --------->ARR14(2)         -----                                                                     <---------ARR14(2)       ------>ZmHOX2a(1)                                                                     <---------AGP1           =======                                            --------->KAN4(2)        --------->ARR11(3) <-----------GT1                  <---------YAB1           <---------KAN4(1)        <---------CCA1(2) --------->HSFB2a(1)                  --------->ICU4     <---------AtLEC2           <-----------RAV1(1)   <---------HSFB2a(1)     <---------ZAT14             <----------DOF2                <---------ANAC46  <---------TOE2(3)    <-----------HVH21  <-----------GT1    ------->TEIL    --------->REM1(1) --------->ICU4<----------   cttcgccttcactgatggtgatgattttcgttttcctttgaatgaatgttctctctggctacatttctgtggatctccattattaagaattttctcctcc  1476800                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----            <------ZmHOX2a(2)                                                                  <-----           <---------ARR14(2)                                                                  ------           --------->ARR14(2)                                                                  ------ ===HOX2a_HOX2a------>ZmHOX2a(1)                                                               ------ -->ZmHOX2a(1) ========================HOX2a_HOX2a                                             ------ ==================HOX2a_HOX2a                                                                <------ ---------------->WRI1   ------->TEIL                                    --------->YAB1       ------- ==================HOX2a_HOX2a                  <---------YAB1<---------YAB1        <---------At4g35610 -GT1   --------->HSFB2a(2)     ------>ZmHOX2a(2)          <---------MYB52(1) ------->TEIL   --------   ttctaaatttcgcgatcctgtttcatgaatttgatccgcttgtgttgattttgattctacagttatgtttttcgattatgagcctctgatgctcgtagat  1476900      ------>ZmHOX2a(2)     <---------GLK1(1)     <---------At4g35610    <---------ARR14(2)                                                                  <---------ANAC46    --------->ARR14(2)                                                                  <---------ANAC58    <---------ARR11(3)                                                    ------>ZmHOX2a(2)    <---------AGP1                                                        =========================== ------->LBD16                                                           <---------GLK1(1) --------->RAV1(2)                                                       <------ZmHOX2a(2) ------->At4g35610                                                       ===============HOX2a_HOX2a --------At4g35610                                                       ============================ -->ZmHOX2a(2)                                                   --------->ARR14(2)     <---------ANAC58 ---->ARR14(1)                                                   <---------ARR14(2)     <---------ANAC55(2) --ZmHOX2a(2)                                               <---------ANAC58            <---------ANAC55(1) ---->CCA1(2)                                               <---------ANAC46     ==================== ----ARR11(3)                                               <---------ANAC58     ------>ZmHOX2a(1) ----ARR14(2)                                              <-------TEIL  --------->GLK1(1) --->ARR14(2)                                            <---------GLK1(2)==============HOX2a_HOX2a --->ARR11(1)                                            --------->ARR14(2)      ==================== --->AGP1                                                <---------ARR14(2)----------------------->TaNAC69(2) --->ARR11(3)                                       <---------MYB52(1)  <---------ARR14(3)         <- ---GLK1(1)                      <---------GLK1(2)<---------ANAC58      --------->ARR11(3)         -- -->GLK1(1)                  <-----------GT1      <---------ANAC46      <---------ARR11(3)       <--- --->ARR10         <----------DOF2                <---------ANAC58   <---------HSFB2a(2)--------->ANAC55(2)   ccgctggatctgcgatgaattctttttatattttcgattcgctagtctagtttcgtttggattcgtgtattcgagatctcttcctctattacgtgattta  1477000             --------->ARR14(2)         <------ZmHOX2a(2)        --------->ARR11(3)        <---------ARR11(3)                                                                  ---------   =============HOX2a_HOX2a                                                                 <--------   ------>ZmHOX2a(1)                                                                       <---------DAG2 ------>ZmHOX2a(2)                                                                <-------TEIL =========HOX2a_HOX2a                                                            --------->ARR14(1) =========HOX2a_HOX2a             ------>ZmHOX2a(2)                             <---------GLK1(2)---- ===============HOX2a_HOX2a <---------At4g35610                                 --------->ARR14(2) =======HOX2a_HOX2a  --------->MYB52(2)              --------->ZAT6             --------->ARR11(1) --------ARR11(3)    <---------MYB46(3)         --------->ARR14(2)              <---------ARR14(2) ------->ARR11(3)  <---------MYB52(1)  <----------DOF2         <---------MYB46(3)--------->CCA1(2) <- ------YAB1  <---------ARR14(2) --------->ARR11(3) <-----------GT1  <----------DOF2   <----------DOF2   tgatcctgaagatcaaatcccgtttgtttcttctgatctcgctctaactggatttactctaacattggttctttgtatttcagattcgcattacctttct  1477100  Previous    Next  AGI:  At5g05000.1    Description:  ATTOC34/OEP34 (Translocase of chloroplast 34). Identical to Translocase of chloroplast 34 (TOC34) [Arabidopsis Thaliana] (GB:Q38906;GB:Q0WNL4;GB:Q8L9G5;GB:Q9FF74;GB:Q9GDD2); similar to TOC33 (PLASTID PROTEIN IMPORT 1) [Arabidopsis thaliana] (TAIR:AT1G02280.2); similar to TOC33 (PLASTID PROTEIN IMPORT 1), GTP binding [Arabidopsis thaliana] (TAIR:AT1G02280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67058.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63847.1); contains InterPro domain AIG1; (InterPro:IPR006703); contains InterPro domain Chloroplast protein import component Toc34; (InterPro:IPR005688) Range:  from: 1474114    to: 1476410    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g05010.1    Description:  clathrin adaptor complexes medium subunit-related. Identical to Coatomer subunit delta [Arabidopsis Thaliana] (GB:Q93Y22;GB:Q56WY5;GB:Q93Y42;GB:Q9FF73); similar to unnamed protein product [Vitis vinifera] (GB:CAO41963.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60953.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Clathrin adaptor, mu subunit, C-terminal; (InterPro:IPR008968) Range:  from: 1476584    to: 1480198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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