Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ANAC58       <---------ANAC46      ------>NtERF2    --------->ATERF1(1)    <------NtERF2   --------->At4g35610   --------->ABI4(2)   <---------At4g35610                                             <-----------ARR10   ------>NtERF2                                                   <---------ARR11(3)  <---------DEAR3(1)                                               --------->ARR14(2) -------->LBD16                                                    <---------ARR14(2) ---------ATERF1(1)                    <---------ARR14(2)          <---------ARR11(1) --------DEAR3(1)                      --------->ARR14(2)   =============================HOX2a_HOX2a -------LBD16                      <---------At4g35610      <------ZmHOX2a(1) ------>SPL7                       <------NtERF2            =================================HOX2a_HOX2a -----SPL7                   <-----------HVH21       <-----------TGA1                               < -------HVH21               --------->O2             <-----------HVH21                         ------ -->LBD16                   --------->ANAC46 <---------ARR11(3)    --------->ARR11(3)          <----- --ANAC58      <---------AtMYB61   --------->At4g35610----------->HVH21           <------ZmHOX2a(2)<- --ANAC58      --------->ALFIN1  <-----------RAV1(2)--------->ANAC46         --------->LBD16 <------- -LBD16<---------ANAC58    <------NtERF2     --------->ARR11(3)   <---------CCA1(2)   <------ZmHOX2a(2)   tccggcgctgcgtagcggtggtattagtccccgtcgcagcggaaacagaccttctcgtcacaggacccaaatcttgtccctgagatcgatcaagggtagc  1473600             --------->GLK1(1)             <------ZmHOX2a(2)            --------->ARR14(2)            <---------ARR11(3)            <---------AGP1            <---------ARR14(2)            --------->ARR11(3)            --------->AGP1           <---------CCA1(2)                       --------->ANAC58      <---------ZAT2                               --------->ANAC58      --------->ZAT2                        --------->DEAR3(1)      --------->At4g35610                <---------ALFIN1      <------NtERF2                      --------->ANAC46      <---------At4g35610              <---------ALFIN1     ------>NtERF2                     ----------->RAV1(1)     <---------ATERF1(1)             --------->LBD16       --------->ARR14(2)    <---------DEAR3(1)              <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   <---------LBD16           --------->DEAR3(1)   --------->SPL7  --------->DEAR3(1)         --------->DREB2C(2) <---------MYB52(1)                                -- ---------At5g28300        --------->MYB52(1)   <---------SPL7                                     -- --->At4g35610            <---------ALFIN1  <---------ALFIN1         <---------ANAC46             --- ----At4g35610------>ZmHOX2a(2)     --------->HSFB2a(2)--------->ANAC58       ---------->DOF2     <-- --------ALFIN1          --------->MYB46(3) --------->AtMYB61    <----------DOF2                 <--- -P--------->LBD16      --------->SPL7--------->ANAC46 --------->ANAC58      --------->YAB1<---------   ttcaccgcggctcagatctctactcgtaccaccggcttccccaacaccaccgttcgcaagcgattcgctttgagggtaatcaaagtttgattttttctct  1473700                                <---------ANAC46                               --------->RAP2.3(1)                               <------NtERF2                              ------>NtERF2                              --------->LBD16                             --------->RAP2.3(2)                             --------->RAP2.6(2)             <------NtERF2   <---------ATERF1(2)           <---------ANAC58  --------->ATERF1(2)           <---------ANAC58 --------->ERF1           --------->DEAR3(1)--------->DEAR3(1)      --------->GLK1(2)     --------->RAP2.3(1)      <---------ARR14(2)   ------>NtERF2     <---------GLK1(2)     <---------ATERF1(1)                 <---------RAP2.6(3)   --------->ANAC58        --------->At4g35610                 ------>NtERF2   --------->ANAC58        <---------At4g35610         <---------MYB52(1) ------->LBD16          --------->At4g35610           <-------GAMYB                            ------ ---->NtERF2<---------SPL7--------->DEAR3(1)       ------>NtERF2         ------>ZmHOX2a(2)     ------ ------>ANAC46         <---------DEAR3(1) --------->At5g28300  <---------DDF1       <---------ZAT14 -------ETT(1)--------->SPL7--------->ATERF1(1)   <---------ALFIN1     --------->ARR11(3)    <------- ------LBD16------>NtERF2--------->ATERF1(1)   ------>ZmHOX2a(2)       <---------AGP1--------->ANAC46 --GT1--------->ARR14(2)<---------At4g35610----------->HVH21  <---------ETT(1)      --------->ZAT14   ccggcaagaatcggcgtccgtctagtcgctgccgccgtattagcggtgatcgacaccgttgatgccgacatttgatctggtttgactacacaatcgcacc  1473800                                                                    --------->HSFC1(2)                                                                    <---------HSFC1(2)          -----                     --------->ZAT6                                 --------->HSFB2a(1)        <----- --->ANAC58     <---------ICU4            --------->TOE1(3)         <---------HSFB2a(1)        ====== --->ANAC58   <---------ARR11(3)          --------->TOE2(3)     ----------->GT1                ====== --ALFIN1     --------->ARR11(3)    --------->YAB1             ----------->GT1               <-------   cctcggataaaaaacaaatctttacactaatgtcgaaatcagaaccctaaattcactagagagagttggaaaattcgaaaactttgttcgaaattgagga  1473900                    --------->DEAR3(2)         <------ZmHOX2a(2)        <---------ARR14(2)        <---------ARR11(3)        --------->ARR11(3)        --------->ARR14(2)    <---------DOF5.7(2) ----->DOF2        ------->TEIL                                                           --------->AHL20(2) -ZmHOX2a(1)    ----------->HVH21                                                         <---------AHL20(2) ===============HOX2a_HOX2a                     <----------DOF2                           <---------AHL20(1) ================HOX2a_HOX2a                 ------>ZmHOX2a(1)   *TSS  <----------DOF2<---------AHL20(2) --TOE2(3)------>ZmHOX2a(2)     <---------MYB52(1)          <---------MYB52(1)       <---------YAB1   aagagtaaacgatcttctctgaaccgtcttctccgtttgccaaattcctcctttaaacatcggttttttttttctttaactcaaatttttattttatttc  1474000                                             <---------ICU4                                           <---------YAB1                                         <---------------AGL15                                   <----------DOF2                               <---------MYB52(1)                               <---------ARR14(2)                              --------->At5g28300                             <---------MYB46(3)                             ----------->GT1 --------->YAB1                           <---------At4g35610                            --------->YAB1                        <---------ZAT14  --------------->AGL15            <---------ICU4                    --------->MYB52(1)<-----------GT1                     <--------HAHB4                 --------->YAB1--------->ARR14(2)                        <---------ATHB12          <---------ANAC46------------>AtMYB77  --------->YAB1           --------->ICU4     <---------AtLEC2   --------->ZAT14 <---------YAB1        <-----------GT1                      <-   aaaacttgcatcgcgtcaaaaataactgcagcggttacttttaccattaatgacaaaatggaattatctcttctaatcattttcaccaagagagtagctc  1474100                                                             --------->ICU4                                                           --------->YAB1                                                         --------->At5g28300                                                        ----------->GT1         <-----------GT1                     <---------ARR11(3)    <---------YAB1               --------->ICU4 <----------DOF2                             <--------  <-----------GT1           ----------->GT1  --------->ARR11(3)                  --------->HSFB2a(2) --------ICU4       ---------->DOF2 <---------TOE2(3)----------->RAV1(1) <---------ALFIN1   ---------   ttaattacgatttacgagaggctaaagaagatgtaattaagatgagagaactttgcgacagtaattatctgtgaaccacatttctcgagttgtatcacaa  1474200                                                                  --------->TOE1(2)           <------                                                                <---------ARR14(3)            <------                                                                <---------ARR11(3)            -------                                                                --------->ARR11(3)            -------                                      ------>MYB46(1)           --------->ARR14(3)   <---------GLK1(2) ---GT1                               ------>MYB83   --------->ANAC46              --------->LBD16 <- >YAB1                         <---------MYB52(2)   --------->ZAT18              <---------LBD16-----   tttcaactacagaacaatctctcagatagacaaacaaaccaaacaaaactcgtgtccacaactcaagaccttcgacttgctaaaccggagtctcgcagct  1474300     <---------DEAR3(2)  ------>NtERF2 --------->ANAC58 --------->ANAC46 --------->TGA1a <---------TGA1a --------->ANAC58                   <---------WOX13(1) --------->O2                      <---------ANAC58               --------->ANAC58 <---------ALFIN1                  <---------ANAC58           --------->ANAC58 <---------O2                     --------->ATHB12            --------->ANAC58 ---ZAT2                   --------->TOE1(1)           --------->REM1(1) ---At4g35610              --------->TOE2(1)        <---------ANAC58 -->ZAT2--------->ZAT14--------->HSFC1(2)           <---------ANAC58 -->At4g35610          <---------HSFC1(2)      --------->MYB52(1) --------->ANAC58                --- --------ALFIN1   <---------HSFB2a(2)        --------->MYB46(3)  <---------------AtSPL3  ---------->DOF2 ---->PCF2        --------->HSFB2a(2)   --------->HSFB2a(2)   --------->ANAC46     --------->MYB46(3)   cccacgccggtttactctctctcgaaacatcggacttgattgctcgaaccaatggcttcatcaccagcaagtactgcattttcaaaccatcaaaagatga  1474400                                                                 <---------ANAC58                                                                 <---------ANAC46                                      <---------ZAT6         <---------ANAC58  --------->TOE2(3)       <---------AtLEC2   --------->TOE2(3)          <-----------RAV1(2)     --------->ICU4        --  <---------ATHB12     --------->ANAC58    --------->ANAC55(2)   <---------ANAC58 ---------->DOF2  <- ------>AHL20(2)       --------->ANAC58  <-----------GT1     <---------ANAC58<---------ATHB12     <--   ataaatgatgcatgatgttttgatcaagccttattctgtattgttactgaatggttcagaggggcttacttggaatgcaaacattaaaggaatcagtttt  1474500  Previous    Next  AGI:  At5g04990.1    Description:  sad1/unc-84 protein-related. similar to sad1/unc-84-like 2 family protein [Arabidopsis thaliana] (TAIR:AT3G10730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66036.1); contains InterPro domain Sad1/UNC-like, C-terminal (InterPro:IPR012919) Range:  from: 1471482    to: 1473965    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g05000.1    Description:  ATTOC34/OEP34 (Translocase of chloroplast 34). Identical to Translocase of chloroplast 34 (TOC34) [Arabidopsis Thaliana] (GB:Q38906;GB:Q0WNL4;GB:Q8L9G5;GB:Q9FF74;GB:Q9GDD2); similar to TOC33 (PLASTID PROTEIN IMPORT 1) [Arabidopsis thaliana] (TAIR:AT1G02280.2); similar to TOC33 (PLASTID PROTEIN IMPORT 1), GTP binding [Arabidopsis thaliana] (TAIR:AT1G02280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67058.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63847.1); contains InterPro domain AIG1; (InterPro:IPR006703); contains InterPro domain Chloroplast protein import component Toc34; (InterPro:IPR005688) Range:  from: 1474114    to: 1476410    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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