Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->ANAC46                                                               --------->ANAC58                                                       <-----------ARR10                                                       --------->GLK1(2)                                                       --------->ARR14(2)     <---------RVE1(1)                                                       <---------ARR14(2)     <---------CCA1(1)                            --------->ARR14(2)         <---------ARR11(3)    <---------GLK1(2)-------                            <---------ARR14(2)        <---------ARR14(1)     --------->ARR11(3)                    ----------->HVH21                 <---------GLK1(2)----------->GT1        -------         ------->TEIL  <---------ANAC46    --------->AHL20(2)<---------ALFIN1<---------ARR11(3) ----- --------->YAB1 <---------YAB1   ----------->GT1---------->DOF2--------->ANAC58             ---------   caaacaaaatgtatcattttgtttgacgagtatatgtgtaaaatataaaataaagagaatcttacacgccaaattgtaagattttttataaaaaaaacga  1461500                                                    <---------GLK1(1)     <---------At4g35610 -->ANAC58                                          --------->GLK1(1)     --------->At4g35610       < -->ANAC58                                 <---------AHL20(2)  --------->ATHB12--------->GLK1(1)    < ----->DOF2                               --------->AHL20(2)  <-------TEIL--------->ZAT2            < >MYB52(1)                            --------->AHL20(1)---------->DOF2  ----------->RAV1(1)  -------   aagaagacaatttctatatttcatcacttctagttctacatatattatatatggatttcaaagcttcattgaaaccagcagaattctacaatcgaatgaa  1461600                                                                         <---------YAB1                                                                         --------->ICU4                                                                       --------->YAB1                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                     --------->AHL20(1)                                                                    --------->YAB1                                                                 --------->YAB1                                                                <---------AHL20(2)                                                                --------->AHL20(2)                                           --------->AHL20(2) --------->TOE1(3)                    --                                          <---------YAB1      --------->TOE2(3)                  ----              --------->AHL20(2)        --------->YAB1     <---------AHL20(2)                    <---     <---------ZAT6                     <--------HAHB4     <-----------GT1-------->HAHB4      <------ZmHOX2a(2) ---------ANAC58                       <---------YAB1--------->TOE2(3)<---------YAB1         -------- ---------ANAC58               <---------ICU4      <-----------ARR10<---------ICU4           <------- ---------ANAC46     ---------->DOF2<---------YAB1<---------CCA1(2)<---------YAB1        ============ -->ATHB12  --------->AHL20(2)--------->ICU4<---------AHL20(2)<----------DOF2            <------ZmHOX2a(1)   tggcttagtgagaaaataatataaaaagagtaatgactactattattaaatcaaatcttattaactttaattataatgatgcatataaacaggaagatcg  1461700                                                                          <------ZmHOX2a(2)       --------->AHL20(2)                                               ------->GAMYB       <---------AHL20(2)                                            <---------DOF5.7(2)       --------->AHL20(1)                                          --------->DOF5.7(2)  --------->AHL20(2)                                              --------->TOE2(3) ---->ZmHOX2a(2)                        ---------->DOF2     --------->ANAC58 ----->ARR11(3)                   --------->ARR14(2)        --------->ANAC46   --------->AHL20(2) ------ARR11(3)         <---------ARR11(3)                  --------->ANAC58   <---------ATHB51 ->ARR11(3)             --------->ARR11(3)      --------->TOE1(2) --------->YAB1 --ARR11(3)     <----------ID1    <---------ARR14(2)  --------->ANAC58<---------TOE1(3)            <- =====HOX2a_HOX2a   ---------->DOF2  --------->ANAC46 --------->ANAC58<---------TOE2(3)         -----   atcttaaaataaaataaaacgagaaagatactaacatatacacaaagaaacatgagaagcactcgcaatgttaacgatcaaattattcatcttagtgcct  1461800                       <---------ANAC46            <---------AHL20(2)           --------->AHL20(1)           <---------AHL20(1)                     <---------AHL20(2)         --------->AHL20(1)                       --------->AHL20(2)        --------->AHL20(2)                      <----------DOF2 --------->ANAC58      ----------->GT1    --------->WOX13(1)                          ------>ZmHOX2a(1) --------->ANAC58     ------>NtERF2      <---------ICU4                           --------->ARR11(3) --------->ANAC46     --------->LBD16   <---------YAB1<---------AHL20(2)          <---------ARR14(2) --------ALFIN1      <---------ANAC46   <---------ATHB12                          --------->ARR14(2) ->NtERF2<---------AHL20(1)           <-----------GT1 --------->AHL20(2)          <-----------GT1  <-   cccacgcaaaatatatatttgtgccgcgtaaaatcaagtttaatcattcactttaattaaaaatacaaatcgtcgactcttatatatcctctctacaaga  1461900                                                                      <------ZmHOX2a(1)                                                                     ----------->GT1                                                                   <------ZmHOX2a(1)                                                               <--------P                                                               <---------MYB52(1)            --------                                                              <-------GAMYB                  --------                                                             <---------MYB46(3)              --------          --------->TOE2(3)               <---------ARR11(3) <---------DEAR3(2)             ---------        *TSS                              --------->ARR11(3)<---------DEAR3(1)             ------>ZmHOX2a(1) --------ZAT14                --------->ANAC46            ------------>AtMYB77          ------>ZmHOX2a(1)   gtaaacagataacatcaaaaacatttgatcacacaaaacttcaatatctcacaaacgagaggccggttaggaggaaattacaaaaatgtcctcctacggc  1462000                                                                       --------->ARR14(2)                                                                       --------->ARR11(3)                                                                       <---------ARR11(3) ->ANAC46             <---------ARR14(2)                              <---------CCA1(2) ->ANAC58        --------->ANAC58                                   <----------DOF2                 < ->ANAC58        --------->ANAC58                             --------->YAB1                       <- >SPL7    <XXXXXXXXXXXXXXXXXXXXMIR783       ---------->DOF2   <---------ICU4                      ---   agactcgacgagcatgagcaagcgaaacttgaggcaagtcggaagacaaagaagagaattgccatcatcgctatatcttccatcgttctcgtctgcattg  1462100           <-------GAMYB          <---------MYB46(3)         <------NtERF2        <-----------HVH21        <---------RAP2.6(3)                                                                         =       --------->RAP2.3(2)                                                                          <       --------->DEAR3(1)                        --------->MYB52(1)                                 <      <------NtERF2                             --------->At1g77200                                 <      --------->DEAR3(2)                        ----------->HVH21                                   <      --------->ATERF1(1)                       --------->DREB2C(2)                                 -      --------->RAP2.3(1)                       --------->MYB46(3)                                  -     <---------ATERF1(1)                        ------->GAMYB                                       <     ------>NtERF2                             --------->MYB46(3)                                   -    <---------ARR14(2)                         --------->DEAR3(2)                                   -    --------->ARR14(2)                        --------->MYB52(1)                                    <   <------NtERF2       <---------ZAT2        --------->AtMYB61                                      <   --------->ATERF1(1) --------->ZAT2       <---------ABI4(2)                                    ----  <---------ATERF1(1)  --------->At4g35610  <---------MYB55(2)                        ---------->DOF2  <---------DEAR3(2)   <---------At4g35610  --------->MYB46(3)   --------->GLK1(1)    =============== <---------DEAR3(1)<---------ALFIN1     <---------MYB52(2)    ------->GAMYB         ----------->HVH21 ------NtERF2<---------TOE1(2)     ------->GAMYB--------->DEAR3(1)                 --------->LBD16  < ----------HVH21   --------->AtMYB61   --------->ANAC58       ======================================= ------>ETT(2)    --------->MYB46(3)   --------->ANAC58    --------->MYB52(1)     <---------ANAC46  -   tcgtcggagccgtcgttggaaccacagctcgcgataacagcaagaaaccaccgacggagaataacggagagccaatatcagtctccgtgaaagccctgtg  1462200         --------->ZAT14         <---------ZAT18  ----------->HVH21 =======================bZIP_DOF ---------ANAC46 ---------bZIP60(2)                                                                           ------- ---------ANAC55(2)                                                                          <------- ---------ANAC58                                                                           <--------- -------->O2                                                                              --------->RAP2.3(3) -------->bZIP60(2)                                                                       --------->RAP2.6(2) ---------bZIP60(1)                                                                       --------->RAP2.3(2) -------->bZIP60(1)                                             --------->ANAC58       --------->ANAC58 -------->ANAC55(2)                                --------->ANAC46                    --------->ANAC58 ---------ANAC58                             ------>NtERF2      --------->ANAC58      --------->ZAT18 ---------TGA1a                            --------->At4g35610---------->DOF2         --------->SPL7 ------->HVH21                           ------>ZmHOX2a(2)   <---------ATHB12<----------DOF2<------NtERF2 =========bZIP_DOF                     <---------ARR14(2)    <------ZmHOX2a(2)    <---------------AtSPL8 ---------O2 ---------->DOF2<---------HSFB2a(2)    --------->ANAC58      <------ZmHOX2a(1)--------->DEAR3(1) =========MYC_MYB           --------->HSFB2a(2)    --------->ANAC58 <-----------RAV1(2)--------->ANAC46 -------->TGA1a----------->GT1         --------->ARR14(2)    ===================HOX2a_HOX2a------>NtERF2   cgacgtgacattgcacaaagaaaaatgtttcgagacccttggatcggctccaaacgcgagccgatcaagcccagaggagcttttcaagtacgccgtcaaa  1462300                                                                       --------->RAP2.6(2)                                                                     --------->At4g35610                                                                     --------->ZAT2                                                                     <---------ZAT2                                                                     <---------At4g35610                                                                  --------->TGA2(2)                                                                 <-----------TGA1                                                                 <-----------HVH21                                                                --------->O2                                                                --------->TGA1a                    <---------HSFB2a(1)                         --------->bZIP60(1)                    <---------HSFC1(2)                          <---------O2                  ---------->DOF2                               <---------TGA1a               <---------HSFB2a(2)                              --------->bZIP60(2)               --------->HSFB2a(2)                              <<<<<<<<<<AtbZIP1           <---------ZAT2                                       <---------bZIP60(1)           --------->At4g35610                                  =====================================           --------->ZAT2<---------HSFB2a(2)                    --------->ANAC58        --------->ALFIN1       --------->ANAC55(2)                                      --------->ANAC46      <---------ANAC58       --------->ANAC46  --------->HSFB2a(2)                  <---------ALFIN1        <---------ANAC46       <---------ANAC55(2)--------->ETT(2)                 --------->ANAC58           <---------ANAC58      <---------LBD16 --------->ARR11(3)  ================================MYC_MYB     <---------AtLEC2   <-----------HVH21--------->HSFB2a(1)   ------->GAMYB    --------->ANAC58       <---------ANAC58  --------->AtMYB61 --------->HSFC1(2) --------->MYB52(1)  --------->ANAC46       <---------ANAC58 --->DOF2  <---------At4g35610  <---------ARR14(2)       <---------DOF5.7(2)   <---------RAP2.3(3) --WRKY12  --------->GLK1(1)    <---------GLK1(2)  <-------MYC3 --------->ANAC58------>NtERF2 <------ --HVH21   <---------GLK1(1)    --------->ARR14(2) ------->MYC3------>NtERF2--------->ALFIN1<--------   gtcaccatcacggagctctcgaaagttctcgacggattctccaacggcgaacacatggataacgccacgtcagcagcaatgggggcttgcgtggagctta  1462400  Previous    Next  AGI:  At5g04960.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G10710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46182.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 1461908    to: 1463970    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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