Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------ZAT6                                                                             ====================RAV                                                                           <---------ANAC46                                          --------->TOE1(2)                <---------ANAC58                                         --------->DEAR3(2)             <----------DOF2                                        --------->PCF2                 <---------ANAC58                                        ------->TEIL          <------NtERF2<---------ANAC58 ---->GT1--------->ARR14(2)       <---------ARR14(2)        <---------ANAC46 <-----------RAV1(1) -->At4g35610                     --------->ARR14(2)        --------->ALFIN1 --------->ALFIN1 ---At4g35610                   ----------->HVH21      --------->YAB1  <---------ANAC46     <------ZmHOX2a(2) ->ALFIN1<---------ARR14(2)   <---------At4g35610--------->ANAC58      <---------ANAC58   --------->GLK1(1) --DEAR3(1)                   <------NtERF2  --------->ANAC46<---------MYB46(3)         <------ZmHOX2a(1) --AtMYB61        ------->TEIL--------->At4g35610--------->ANAC58 <---------bZIP60(2)<-----------RAV1(2)   gaaacttggccaatacgatggatgtgagaggcatcggacccgaacccacgaaggcaatcttggtggggacatggcttgagtgttggctcaggagatcgaa  1458500                     <-------GAMYB                     ============================================MYC_MYB                    --------->MYB55(2)                    <---------MYB46(3)                          <---------AtMYB61                    --------->MYB111(2)                    <------MYB83                    --------->MYB111(1)                    <------MYB46(1)                    --------->MYB46(2)                   --------->ALFIN1                    --------->MYB52(2)                 ================================bZIP_DOF                 ------------>MYB.PH3(2)               --------->O2            <---------ANAC58                           <---------O2            <---------ANAC58                           --------->TGA1a           --------->STY1(2)                           <---------TGA1a            ------>ZmHOX2a(2)       <---------ANAC58             =============================bZIP_DOF        <------ZmHOX2a(2)       <---------ANAC58             ---------->DOF2  <---------WRKY38(1)        <---------ARR14(2)   <---------ANAC58==============================================MYC_MYB        --------->ARR14(2)   <---------ANAC58<--------P      <------ZmHOX2a(1)--------->WRKY18(1)         <---------ARR11(3)  <  --------->ZAT2 ================================================MYC_MYB        --------->ARR11(3)  -  <---------ZAT2<---------TOE2(3)<---------TOE2(3) <-----------HVH21        ---------->DOF2 <--------   ctcgagcttgcctagcttgaggtagttggagtagtaaggaaagatgtgtaaatggtcaagtgggttttggtcttcttgtaaagatcccaaaattgtggag  1458600                                                                                                  <--                                                                                                  --- -----------RAV1(1)                                    <---------CCA1(2)                         <--- -------->ALFIN1         --------->REM1(1)----------->ARR10<----------DOF2           <---------bZIP60(1) -ANAC46     <-----------GT1   ---------->DOF2  --------->At4g35610               ----------->HVH21   aagtgttgctctaaataaccttcggcttcaccacaaagcttgatgagattagctctcatgtctttgacttcttcacacatatttgtgacatcgatgtttg  1458700              <-------MYC4              ------->PIF5              <-------MYC3              <-------PIF5              <-------PIF4              ------->PIF4              ------->MYC4              ------->MYC2              ------->MYC3             --------->TGA1a             <---------TGA1a             <---------O2             =================================bZIP_DOF             --------->O2            ------------>OsbHLH66          ---------------->PIF3(2)         --------->ANAC58                               ----------->GT1         --------->ANAC58                               <------MYB83         ----------------->PIF3(1)                      --------->HSFB2a(1)       ================MYC_MYB                          <------MYB46(1)       <--------P                                  --------->HSFB2a(2)                  <---------SPL7    <---------MYB46(3)                     <---------DDF1                             ---------------  --------->LBD16                         <<<<<<<<<<bZIP23                          <------MYB46(1)  <---------LBD16                         <<<<<<<<<<bZIP19                          <------MYB83 <---------ANAC58                         <---------bZIP60(1)    <---------ARR11(3)--------->MYB59 <---------ANAC58                         <---------ETT(2)       --------->ARR11(3)<---------AtMYB61 -------ARR14(2)                          --------->ETT(2)    <-----------GT1    --------->CCA1(2) ------>ARR14(2)                       --------->ALFIN1 <---------HSFB2a(1)   <---------TOE2(3) ------CCA1(2)<-------MYC2         ---------->DOF2 <---------HSFB2a(2)    <----------DOF2           -   tatccgtgggtaagcacgtggacacgagttgtccgaacaaagtgtcgacatttttggaaggttttaagctcttgagctttgagatttggtcgtacaagtc  1458800                                                                                    <----------DOF2                                                                                 --------->GLK1(2)                                                                                --------->YAB1                                                                             <---------ICU4                                                                             --------->YAB1                                                                       ----------->GT1                                                                       <---------ANAC55(2)                                      <---------ETT(2)                 --------->ANAC58                                    <---------ARR14(2)    <---------LBD16   --------->ICU4      <---------ANAC58              --------->ARR14(2)   <---------LBD16  --------->YAB1      <---------ANAC58        --------->ANAC58           <-----------RAV1(2)<---------YAB1 >AtSPL3                      --------->ANAC46   ----------->GT1       --------->ANAC55(2) -------->ATHB12              --------->ANAC58  <---------TOE2(3)      --------->ANAC58    *TSS   gatgatttgcttcacaacgagattgttttggcaagccatatcgacactatgaggttatttcaggggagaagataagtaataataatcttttttagacttt  1458900                                                      --------->O2                                             <------------CBF                        ========================================MYC_MYB                        ------->GAMYB       <---------AHL20(2)                     <-----------GT1        --------->ATHB12  <---------WRKY38(1)             <------                  ==============================================bZIP_DOF                      -------                  <----------DOF2          <---------AHL20(2)------------>CBF            ------------                 <---------ANAC58         <-----------TBP  <---------ANAC46            --------->WOX13(1)                 <---------ANAC46      <---------MYB52(1)  <---------PCF2            <<<<<<<<<GATA-1                 <---------ANAC58     ==========================MYC_MYB        --------->AHL20(2)              <---------RAP2.6(2)     <-------GAMYB   --------->TGA1a          <---------AHL20(2)            <---------ANAC46         ----------->GT1  <---------TGA1a         <---------AHL20(2)            <---------bZIP60(2)      <---------MYB46(3)    ----------->GT1    --------->ICU4 --------         <-----------RAV1(1)   --------->MYB52(1)     <---------O2     --------->At4g35610   <-------   gaacaaattttgtgttgtggctttaaccctcgctaagggtcgttatttattggcactcgtggggtcaattcttggctgaaattatttatctatcaatgat  1459000                                       --------->YAB1                                <---------GLK1(1)                                                  --                               <---------ARR14(2)                                                  --                   --------->YAB1------>ZmHOX2a(2)                                            <------      --------->ARR14(2)       <---------ARR11(3)                                             <------  <-------TEIL<---------YAB1   --------->ARR14(2)                                             ------- --ATHB1 --------->ANAC55(2)   <---------AGP1                                           --------->GLK1(2) -->ATHB12 <---------MYB52(1)  --------->ARR11(3)             <---------TOE2(3)        <---------ARR14(2) >CBF <---------ARR14(2)      <---------CCA1(2)               <---------YAB1           <---------GLK1(2) ->ICU4 <-------TEIL         <---------MYB46(3)               <---------TOE1(3)        --------->ARR14(2) --ATHB12--------->ANAC46--------->ALFIN1         <---------ARR11(3)             ------>ZmHOX2a(2) --   tcgattcatatacgttatgaataataagtggtggatctcgtttataatgcaataacttcaaattaagattagcaattcatcgatctctagattctctaca  1459100      <---------AHL20(1)      --------->AHL20(1)      <---------AHL20(2)     <---------AHL20(2)     --------->AHL20(2)     --------->YAB1    <---------YAB1                                                                                <--  <---------ICU4                                                                       -------------- --------->ICU4                                                                        -------------- ------->ANAC55(1)                                                        <---------WOX13(1)      --- ------->ANAC46                                                         --------->ATHB12         <--- ---REM1(2)                                                   <-------GAMYB            --------->ZAT6 ---ZAT14                                                    ----------->GT1          <---------YAB1 -->ZAT14        <---------AHL20(2)           ----------->GT1<---------MYB46(3)<---------AHL20(2)---- ------->YAB1   --------->AHL20(2)    ---------->DOF2  <---------ZAT14 <---------YAB1<-----------GT1   cacataattatattcaaattttatacttagtttagacgtataaagaaatggtaagactgtagatggttaaaacttgattgttttatttatcagtacaaat  1459200                                                                           <---------YAB1        <---------CCA1(2)                                                 --------->TOE2(3)      <---  --------->AHL20(2)                                                     --------->YAB1          ---- -------AHL20(2)                          <---------AHL20(2)         <---------MYB52(2)          <--- ->AtSPL3--------->ARR11(3)               --------->AHL20(2)        <---------At4g35610          ---- ->AtSPL8<---------ARR11(3)      ------->TEIL                       --------->At4g35610          ---- ------>AHL20(2)                <---------CCA1(2)                  ------->TEIL                <----- ------AHL20(2)              <---------TOE2(3)                  --------->ANAC58           <---------AHL20(2) ----->AHL20(2)       <---------YAB1     --------->AHL20(2)     --------->ANAC58    --------->GLK1(2)   ttttttatatatatcttataagttatgttttgatgtatctcgatttatttatcagttaatataagcatgcatctaacattatagataatctatataatca  1459300                                                                                    --------->AHL20(2)                                                                               --------->AHL20(2) ------ANAC55(2)                                                            --------->YAB1 ----->At4g35610    --------------->AGL15                              --------->AHL20(2) ------At4g35610    <---------------AGL15                  --------->YAB1 --------->AHL20(2) ----->ANAC55(2)  <<<<<<<<<GATA-1                         <---------YAB1  --------->AHL20(1) ------->GT1     <-----------GT1                --------->YAB1  ----------->GT1--------->YAB1 ------RAV1(2) <---------AHL20(2)--------->GLK1(2)     <---------AHL20(2)--------->YAB1       -------   ggtgataaacagagtattttatctatattttgaagtatctatttgcataatcaacattttataatatggcaaaaaaaataataaaaaaaaatcaacatgt  1459400  Previous    Next  AGI:  At5g04950.1    Description:  nicotianamine synthase, putative. Identical to Nicotianamine synthase 1 (NAS1) [Arabidopsis Thaliana] (GB:Q9FF79;GB:Q9ZWF8); similar to nicotianamine synthase, putative [Arabidopsis thaliana] (TAIR:AT5G56080.1); similar to putative nicotianamine synthase [Arabidopsis halleri subsp. halleri] (GB:CAE45015.1); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) Range:  from: 1457646    to: 1458891    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version