Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ANAC58                         <---------ZAT2                                     <---------ZAT2                         --------->At4g35610                     --------->CCA1(2)          --------->MYB52(1)         --------->ANAC58           <---------ARR14(2)         --------->AtMYB61       --------->ZAT6                 --------->ARR14(2)                <--        <---------MYB55(2)  --------->At4g35610                 <---------ARR11(3)                ---      --------->ANAC46   <---------At4g35610                    --------->ARR11(3)   ================    <---------MYB52(2)<---------At4g35610 --------->AtLEC2  <---------At4g35610      ------>ZmHOX2a(1) ->LBD16--------->MYB46(3)  <---------At4g35610 <-----------------AGL1      <---------At4g35610  ----   tctcaaacaaaccaccgattgcgatgctgctgcttccactagccatggagactcaattcggaagcagatatatcatacagctcgttcctctctagtcaaa  1441600                                                                 --------->ATHB12                                                               <------NtERF2           <---------WRKY18(1)                                ------>NtERF2          ----------->HVH21                                  <---------DEAR3(1)          --------->WRKY38(1)                                ----------->HVH21          --------->WRKY45                                   --------->DEAR3(1)          --------->WRKY12                     --------->At4g35610       <---------MYB46(3)                <---------ARR11(3) --------->ATERF1(1)                  ----      ------>ZmHOX2a(2)                  --------->ARR11(3)------>NtERF2                    <-------TEIL -------AHL20(2)                        --------->RVE1(1)  --------->LBD16          ---------->DOF2 ------>AHL20(2)                    --------->AHL20(2)    <---------LBD16          <---------WRKY12 ============HOX2a_HOX2a            <---------AHL20(2)   <---------LBD16   ----------->RAV1(2)  ----- ----->AHL20(2)                    --------->YAB1   ------->TEIL<---------YAB1     <---------WRKY38(1)   ttaatagatcggttgaccaattcgaagcttgattcaattttaatatctccgatgaattttccggcgacgattgaaatgcctgaggtcaaagagattcaac  1441700                               <---------ETT(2)                             --------->REM1(2)                            <---------ANAC46                          <---------ANAC46                       <----------DOF2          --------->TOE2(3)                              ------                     <---------At4g35610------>MYB83                                           ------                     <---------ZAT2     ------>MYB46(1)                                        <-----                    ------->TEIL      <---------MYB59                          <-----------GT1 <-----                 --------->ANAC58     ------->GAMYB                        --------->GLK1(2)   <-----                 --------->ANAC46     --------->AtMYB61           <---------MYB52(1)   --------->AtMYB61                 --------->ANAC58    --------->MYB46(3)--------->AHL20(2)  <-----------ARR10 <------- --->GAMYB    --------->ARR14(2)    --------->ANAC58  --------->YAB1 <---------ANAC46 --------->MYB46(3) ---->MYB46(3)<---------ARR14(2)    --------->ANAC58  --------->AHL20(2)  <---------GLK1(2)  <-------   cgaagaaaacaaaacaaatacgcagcttttgtgtagacaaccaaacaaaaacttaataaaaatactcggttttgtagaatcttacctcaccatcgcagat  1441800     <---------ANAC58     <---------ANAC58    --------->At4g35610                                                  <---------ARR11(3) --->ARR11(3)                                                  --------->ANAC58 --->ARR14(2)                                              <---------MYB52(2)                -------- ----ARR11(3)                                    ------->TEIL  --------->ZAT6                <------- ----ARR14(2)     --------->ARR14(2)            <---------CCA1(2)        --------->ARR11(3) <-------- ----GLK1(2)      --------->GLK1(2)         <---------ANAC58   --------->ANAC58         ------>ZmHOX2a(1) --TOE2(2)        <---------ARR14(2)        <---------ANAC58  <---------TOE2(3)        --------->TOE2(3) --TOE1(2)       <---------GLK1(2)          <---------ANAC46 --------->MYB52(1)  <---------GLK1(1)   tttagtagcttacaatacagaatctactagacttcttcaaaatttggcttgaatcttctccactaacgctatagacatcttcgatttctcctcaattaat  1441900                                                                                    *TSS<-----------GT1                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                           <---------GLK1(1)      ---------->ID1                                                        --------->ANAC46        --------->ALFIN1                                                        --------->ANAC58      --------->O2                                                        <---------ANAC55(2)   <---------ANAC58                                                        --------->ANAC58      <---------ANAC58                                               --------->ANAC58               --------->ANAC55(2)                                     >>>>>>>>>TBF1      --------->ANAC55(2)   --------->TGA1a <---------YAB1                >>>>>>>>>TBF1 ===========================================bZIP_DOF ->AHL20(2)                 >>>>>>>>>TBF1    ---------->DOF2                  <---------O2 --AHL20(2)                 ------------------------>ANAC81--------->GLK1(1)  <---------TGA1a -ATHB12      <---------At4g35610 >>>>>>>>>TBF1--------->ANAC58          --------->REM1(2)      -----   cttcttattcgttttcggctctcgtatgaagaagaagaagaagaaatgaaagcaaaatacgaaatccctaaaacttgtagacgtgtcgttttactaaatc  1442000                                                     ----------->GT1                                                     --------->ICU4                              <---                                                     <---------YAB1                              ----                                                    <---------TOE2(3)                           <----                           ----------->GT1         --------->YAB1            --------->At4g35610-----                       ---------->DOF2             <---------ICU4         ---------->DOF2      <-----                      <---------AHL20(2)          <---------ATHB51    ----------->GT1 <-----------GT1           <---------AHL20(2)                 ------------>CBF       <---------ZAT6  <-----------GT1           --------->AHL20(2)   --------->REM1(1) <---------ATHB12--------->ATHB12  --------->AHL20(2) ------->CBF        <-----------TBP     <------------CBF         <------ZmHOX2a(2)  <---------AHL20(2)   caatcccatggattttatttgtatataaagagttacaccagtaattgtgtcaataatgtttatatggatcagtggtaaaagctgaattaaacgttcccat  1442100                                                                             ----------->RAV1(2)                                                                             <---------At4g35610                                                                             --------->At4g35610                                                                       ------->MYC2                                                                       <-------MYC2                                                                       <-------MYC4                                                                       ------->MYC4                                                                       <-------MYC3                                                                       -------->ABF1         --------->HSFB2a(2)                                           ------->MYC3       <-------TEIL                                                   --------->ANAC46   <---------TOE2(2)                                                  <---------ANAC55(2)   <---------TOE1(2)        <---------AHL20(2)                        --------->O2 ------ICU4             <---------AHL20(2)                            --------->ANAC55(2)           < ----->YAB1            <---------AHL20(2)                             <---------TGA1a               < -----ATHB12       <---------DAG2                                     <---------O2  --------->ATHB12- ---->ICU4         <----------DOF2                                    --------->TGA1a   --------->YAB1 ----TOE1(2) --------->GLK1(2)       --------->AHL20(2)   <----------ID1 <-----------HVH21   --------   gatcacaggttcgagattccacttttttatttttttcaaaaaaatgaacaaaatagcaaaacgacaatacacacgtgtcaactgagtcatttgtaatgag  1442200                                                    <---------DAG2                                ---                                                    <----------DOF2                               ---                                                  ------->TEIL                                    <-- ---------TOE1(3)                             --------------->AtSPL8                              --- ---------TOE2(3)                             --------------->AtSPL3                              <-- -------->MYB59    --------->At4g35610  ----------->GT1                                    --------->ANAC46 ->ICU4   --------->YAB1           <-----------RAV1(2)                        <-----------GT1--------   tttaggtataaatgataaatcagcactaagcatttgtccaggctgaaaaacgtactttttgtatagttcagataaaaaaaaaaccttctccccactaaac  1442300                                         ------>ZmHOX2a(1)                                 <-----------GT1  --------->HSFB2a(2)         <---------YAB1                                              <----------DOF2  <---------HSFB2a(2)        --------->AHL20(1)                  --------->YAB1        <-----------GT1 ------>ANAC58               <---------AHL20(1)                 <---------YAB1        <-----------GT1 ------>O2                   <---------AHL20(2)               --------->TOE2(3)      <---------AHL20(2) -------O2-------->P        <---------AHL20(2)                --------->YAB1     <---------AHL20(2) ------>ANAC58              --------->AHL20(2)               <---------YAB1      --------->AHL20(2) -------ANAC55(2)   ----------->GT1      --------->ICU4--------->AHL20(1)    <----------DOF2 ->ZAT14  ------->TEIL      --------->YAB1  <---------YAB1 <-----------GT1   <---------DAG2   acgtctagaatcaacctcggtttagtaaaattatatttcagtccttatgagaaaaaacatattacgataatagctcatactttttaatttaacttttgaa  1442400                                                                                   <---------------AGL15                                                                             --------->ANAC58                                                                             --------->ANAC46                                             <-----------GT1                 <---------ANAC55(2)                                             --------->ANAC46                --------->ANAC55(2)                        ----------->HVH21<----------DOF2               <---------ARR11(3)               <---------REM1(1)      ------>ZmHOX2a(1)   <-----------GT1    --------->ANAC58       --------->ANAC55(2)     <---------ATHB12--------->ANAC46        --------->ARR11(3)      ------   tccagatttaagtgatgttgtagtttctgaccattcaatccttctttacaccatacaatattacaatgttgaagataatacgaaactaaatgaagaagtg  1442500  Previous    Next  AGI:  At5g04920.1    Description:  vacuolar protein sorting 36 family protein / VPS36 family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO64568.1); contains InterPro domain Vacuolar protein sorting 36 (InterPro:IPR007261) Range:  from: 1438960    to: 1441984    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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