Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------At4g35610                   <---------ZAT2                   ----------->RAV1(2)          =====================RAV          ----------->RAV1(1)          <---------ALFIN1         <------NtERF2        <---------RAP2.6(3)        ------>NtERF2        <---------ATERF1(1)        <------NtERF2       --------->ANAC58       <---------ATERF1(2)       --------->ANAC58       --------->ANAC46                             <------MYB46(1)       --------->DEAR3(1)                           <------MYB83     <-----------GT1       --------->ATERF1(2)                       <---------AtLEC2   <-----------GT1       --------->RAP2.6(2)                  --------->ARR14(2)   <---------ICU4            <---------CCA1(2)      <---------RAP2.6(2)                   <---------ARR14(2) --------->ANAC58   <---------ANAC58 -------CCA1(2)    --------->At4g35610--------->ANAC58         --------->ANAC58   <---------ANAC58 >At4g35610        --------->ZAT2     --------->ANAC58   ----------->RAV1(1)  <---------MYB59    <---   atctcttggccgccacattgcagctgaaacagattgcaagaagccatttctgcttggtccaacacaagtattacccattccctaacttgtcttaaatctc  1419900                      <---------YAB1                     ------>ZmHOX2a(2)                    --------->CCA1(2)                    <------ZmHOX2a(2)                   --------->AGP1                   <---------AGP1                   <---------ARR11(3)                   --------->ARR11(3)                   --------->ARR14(3)                                                    ------>ZmHOX2a(2)                   --------->ARR14(2)                                                  --------->ARR11(3)                   <---------ARR14(3)                                         <---------ARR14(2)   <---------------AGL15           --------->TOE2(3)                          --------->ARR14(2)  <--   --------------->AGL15           --------->TOE1(3)                  ---------->DOF2  <---------ARR11(3)  ----------------->AGL2    <---------YAB1                       <---------YAB1   ------>ZmHOX2a(1) -------DOF2       <---------ARR14(2)                         --------->GLK1(2)   ==============HOX2a_HOX2a   tttcaccagaaatagcatcaagatctgattacaataacctcaaaaacaatctaatctcattactaatctgataaaagtcaaatcctttcgatcttaaaac  1420000                                                    ----------->GT1                                             --------->At4g35610                                             --------->ZAT2                                             ----------->RAV1(2)                              <------                                             <---------At4g35610                              <------              --------->TOE2(1)              <---------ZAT2                               <---------ANAC58              --------->TOE1(1)          --------->ANAC46                                 <---------ANAC58             <---------LBD16             <---------ALFIN1     ------>MYB46(1)           --------->ARR11(3)            --------->TOE1(2)           <---------REM1(2)     ------>MYB83<------ZmHOX2a(1)   <------            --------->TOE2(2)           <---------ZAT14     <---------MYB59       <---------At4g35610 ---------HVH21                         --------->ZAT14    --------->ANAC46       --------->At4g35610   catcagacatcaaacctcggacttctcagacgattgaatttctacacagctgaactgataaacccaacttggatgaggagaaacagcagagagcttgctt  1420100                                                   <---------ANAC58                                                   <---------ANAC46                                     ----------->GT1                              --------->DAG2  --------->YAB1                            ---------->DOF2   <---------ICU4                          --------->YAB1    --------->ARR11(3)                                  ----- ---ANAC58        --------->ANAC58 <---------ARR14(2)            --------->LBD16                ----- ---ANAC46        --------->ANAC58 --------->ARR14(2)     <---------MYB52(2)           <---------TOE2(3) ---ANAC58        ----------->GT1 <---------GLK1(1)<---------ANAC58       ---------->DOF2       -----   atacagaggtgagaaatagcaagaaaaatcaaaagggtatcggaaaaatcatgacttgaaacaaacccagaaaatagaaagtcacaatgaaggaaaccaa  1420200                                                                                                    -                                                                                                   --                                                                                                  ---                                                                                                <----                                                             ----------->GT1                    <----                                                    ------>ZmHOX2a(2)                           <----                                                   --------->At4g35610                          <----                                                   --------->CCA1(2)                            <----                                                  --------->ARR14(2)                           ------                                                  <---------ARR11(3)                           ------                                                  --------->ARR11(3)                           <-----          --------->ANAC58                        <---------ARR14(2)                 --------->AHL20(2)          --------->ANAC58                        --------->AGP1<---------ZAT14      <---------AHL20(1)   ----------->GT1 --------->LBD16                <---------AGP1---------->DOF2      --------->AHL20(1) ->MYB46(1)      --------->LBD16    ---------->DOF2<------ZmHOX2a(2)                <---------AHL20(2) ->MYB83---------->DOF2      ----------->RAV1(1) <---------GLK1(1)                  --------->AHL20(2) ---->MYB52(1)   <---------LBD16---------->DOF2  --------->GLK1(1)    ---------->DOF2<---------AHL20(2)   acagagagtagaaagcatccccagataacaacaacaaagaaagaaacagagagatctgaagaagagtaaagagaaagaatgagaaaataaattgagttgg  1420300 ---------->GT1 --------->GT1 ------>ALFIN1 --MYB83---------->DOF2 -----ANAC46                                                                    <---------ARR11(3) -----ANAC58                                                    <---------AHL20(2) -----ANAC58                  <---------ZAT14                  <---------AHL20(2) --MYB46(1)                   --------->ZAT14           ----------->GT1    --------->WRKY18(1) --->MYB55(2)                 <---------ZAT18  --------->SPL7  --------->AHL20(2) --->MYB111(2)            --------->ZAT6      <---------STY1(1)<---------AHL20(1)     --------->ZAT14 ----MYB46(3)   ----------->GT1        *TSS  <---------SPL7    --------->AHL20(1)     <---------ZAT14   gtgggaaaataaaagggatagtttaatagcactacacttgcataaaccgtagggacatttgttaatttaatgagagagtcaaggtctgtatagagaagaa  1420400                                                                                     --------->LBD16                                                                                   <---------LBD16                                                                            ------>NtERF2                                                                           --------->DEAR3(1)                                                                         --------->ABI4(1)                                                                         ------>NtERF2                                                                       --------->MYB46(3)           <                                                                      <---------At5g28300----------->ARR10                           <-----------GT1                <---------YAB1--------->DEAR3(1)      -----                 >>>>>>>>>TBF1                    <----------DOF2  <-----------HVH21 <---------At4g35610       ---------->DOF2 <------------CBF       <---------CCA1(2)   --------->WOX13(1) --------->At4g35610   gacgatgaagaaagacgaagaagaagattgaaccagtttgaaaaacgcgtttcttttgttttgattatctatcaccgccgagttttccgctgagatttgt  1420500                                                                                              <------                                                                <---------GLK1(2)             -------                                                               <---------At4g35610            <------                                                               <---------ZAT2                 <------                                                               --------->At4g35610            -------                                        ------>MYB46(1)        --------->ZAT2                 -------                                        ------>MYB83           <---------HSFC1(2)       ----------->GT1                                      <---------ALFIN1         --------->HSFC1(2)     --------->ICU4                                      --------->DEAR3(1)       --------->HSFB2a(1) <---------AHL20(2)               <---------AHL20(2)     <---------MYB111(2)     ------->TEIL         --------->AHL20(2)           --------->AHL20(2)         --------->AtMYB61     ------->GAMYB        --------->ANAC55(2)       <----------DOF2               --------->MYB46(3)    --------->ANAC46      <---------ANAC55(2)  --------->ZAT6                  <---------ZAT18          --------->ANAC58 <---------------AtSPL8 -----------GT1--------->AHL20(2) --------->ZAT18          --------->ANAC58 --------------->AtSPL8 ----->ID1 <---------AHL20(2)---------->DOF2       <---------ICU4           <---------------AtSPL3 <-   cttaactctctttttaattaatctttgattacaaagtccaccaccctcttcaatcttggcaacgcagcttcttatgtaagggtacttaattagtaatata  1420600         ----------->GT1        <---------TOE2(3)        <---------TOE1(3)    <----------DOF2 ---AHL20(2)                                                                  --------->PCF2 -->ARR11(3)                                                             --------->YAB1 ---AHL20(1)                                   <---------HSFB2a(2)    --------->YAB1 ---ARR11(3)               --------->TOE2(3)   --------->HSFB2a(2)------>ZmHOX2a(1) <--------HAHB4 -->AHL20(1)    --------->DAG2                <---------LBD16     <----------DOF2  <---------ATHB12 -->AHL20(2)  ---------->DOF2 --------->AHL20(2)       ------>ZmHOX2a(1)<---------YAB1  <-----------GT1 --------AHL20(2)----------->GT1           <----------DOF2 <-----------GT1    --------->PCF5  <------   ttaaaactttgaggtaaaaaggtgattttccataaaatcaatttcctttctggagtcctaataacatcctttttataatggtcccatcatttactacttt  1420700               ----------->GT1            --------->LBD16           --------->ANAC58           --------->ANAC46                                  --------->YAB1           --------->ANAC58            ----------->RAV1(1)  --------->AHL20(2)          ------->GAMYB       --------->ANAC58          <---------ATHB12           ---------->DOF2       <-----------GT1        --------->ANAC58      --------->ZAT14           ------->MYC3 ----DOF2 <---------LBD16  --------->LBD16     ---------->DOF2  --------->YAB1<-------MYC3   tgaaaaatataacccgcaagtgaaaaatgcgcaaacaaaacccacatattaaagagcagtcattaaaaataagacatccacatgttaaagcttgaacaaa  1420800  Previous    Next  AGI:  At5g04870.1    Description:  CPK1 (calcium-dependent protein kinase isoform AK1); calmodulin-dependent protein kinase/ kinase. Identical to Calcium-dependent protein kinase isoform AK1 (AK1) [Arabidopsis Thaliana] (GB:Q06850); similar to CPK20 (calcium-dependent protein kinase 20), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G38910.1); similar to CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G10660.1); similar to CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G17290.1); similar to ca Range:  from: 1416784    to: 1420339    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g04880.1    Description:  expressed protein Range:  from: 1420728    to: 1422583    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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