Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------LBD16                      ----------->HVH21                     --------->SPL7                    <---------SPL1(1)                    --------->SPL1(1)                   <---------SPL1(2)                   <---------SPL7                   --------->LBD16                      ===================HOX2a_HOX2a                  <---------ANAC58         ----------------->AGL1                  <---------ANAC46         <-----------------AGL1                  <---------ANAC55(2)      <------------MYB.PH3(1)                  <---------ANAC58       <-----------GT1------>ZmHOX2a(1)               ------------------>SPL14  --------->ARR14(2)               --------->GLK1(2)         <---------ARR14(2)               ----------->RAV1(1)       <---------DEAR3(1)     <---------ANAC58          <----------DOF2  --------->MYB46(3)         < --->ARR14(2)  <---------ARR14(2)        --------->MYB52(1)         ===========================HOX2a_HOX2a -->GLK1(1) ----------->ARR10 <---------ANAC58    --------->MYB59   ------>ZmHOX2a(2)   ------>ZmHOX2a(1)   ccaccttcttcggtgagattccgtacgacggagcgtttgagagtaaccgatttaggtcctttccatttgatctcaacaacaggtctcttcctcgttgttg  1414300                                          --------->AtMYB61                                         --------->MYB46(3)                                       --------->AtMYB61          ----------->RAV1(2)                                       <---------ALFIN1       ------>MYB46(1)                                      --------->MYB46(3)      ------>MYB83             --------->O2                                     ------>NtERF2         --------->MYB46(3)          <---------TGA1a                                     <---------ATERF1(1)  >>>>>>>>>>MYB80              --------->TGA1a            ------>NtERF2           <---------ALFIN1    ------->GAMYB                  <---------O2           --------->WRKY12         --------->DEAR3(1)  =========================================MYC_MYB           ----------->HVH21     --------->ANAC46      <---------MYB52(2)              ==============           --------->WRKY38(1)--------->YAB1           --------->MYB46(3)           <------ZmHOX2a(2)       ------>ZmHOX2a(1)     <---------YAB1            <---------MYB55(2)      ------->GAMYB      <--    ------>ZmHOX2a(1)--------------->AtSPL8            <---------MYB111(2)     ==================MYC_MYB   <---------ALFIN1  <---------ICU4 --------->ANAC46 ----------->RAV1(1)    --------->MYB52(1)   ---- ---------ALFIN1     --------------->AtSPL3          =========================RAV  <-----------HVH21-   tccctcctcctcgctgactctgatcagtactatcatcgccaccaccatcggaatccaacaaaccatccatctggtgaacaacgacgatcacgtcgaattt  1414400                            --------->ANAC58                          --------->MYB52(1)                         <---------WRKY12                         <---------WRKY38(1)                       <------NtERF2              --------->ATERF1(1)             <---------ATERF1(1)             --------->ANAC58                                      --------->TGA1a           --------->ATERF1(1)    --------->ARR11(3)               <---------O2        --------->At4g35610 --------->ANAC58      --------->MYB46(3)        ----------->RAV1(1)    <- =======MYC_MYB       ------>NtERF2             <-----------GT1    =================================bZIP_DOF -------At5g28300    --------->ALFIN1        <---------ICU4        --------->O2       --------->TOE2(3) ----->MYB52(1)   <---------DEAR3(1)------>ZmHOX2a(2)              <---------TGA1a    --------->TOE1(3) ------>GAMYB--------->ANAC58     <---------ARR11(3)  --------->AtMYB61   <------NtERF2  ---------->DOF2   aacggcgaagagcggaggccacggtggccaacgcatgatctgtttcattttgaccaccatacaattcacaagtggctgcaacaaaaaacctaaaaggttt  1414500                                                 --------->GLK1(2)                                                <---------GLK1(2)                           ---------                                           <------ZmHOX2a(1)                                <--------                                       --------->LBD16                              <---------SPL7                                      <---------ANAC46                           <---------ANAC46                                      <---------ANAC58                           <------MYB83                                      <---------ANAC58                           <------MYB46(1)                                     <---------LBD16                            --------->MYB111(1)                  <-------GAMYB   <---------GLK1(1)                          --------->ARR14(2)            --------->DAG2        --------->CCA1(2)                    --------->ALFIN1  <---------DEAR3(1)           ---------->DOF2       <---------GLK1(2)             --------->CCA1(2)<---------AtMYB61  --------->TOE2(3)              <---------ARR14(2)   <---------ARR14(2)     <---------ARR14(2) --------GLK1(2) --------->ALFIN1--------->ARR14(2)   --------->ARR14(2)    <------ZmHOX2a(1)   ggaatcttagagaaaaagggtgttggagtaatcgagatttgcggaggaaagaatcggattttaagagatggagatggaggatttggtggacgcggtgtga  1414600         --------->AHL20(1)   --------->RAP2.6(2)                                                                     <---------WRKY12   --------->ANAC58                                                           *TSS         <---------WRKY38(1)   --------->ANAC46                                                         --------->MYB52(2) ------   --------->ANAC58       ---------->DOF2                                 <---------MYB52(1)   ------ >ALFIN1 <---------ARR11(3)                    ---------->DOF2   --------->GLK1(2)      <---------ZAT6 -ANAC46 <---------AHL20(1)               ----------->GT1       <---------GLK1(2)  <----------DOF2   ttcagacgcaaaatatttgaaatttgaagaaagtgagagacagagagagaaaagagtagagagaaggaatctctgcgtttgttttctttagagtcaaccc  1414700                                                 --------->ATHB51                                                 --------->YAB1                                                 <--------HAHB4                                                 <---------ICU4                                                <---------ATHB12                                                --------->ICU4                                                <---------ATHB51                                                --------->AHL20(2)   --------->AHL20(2)                                  <------------CBF                   <---------AHL20(2)                                <---------AHL20(2)      <---------AHL20(2)                                <---------AHL20(1)   <---------AHL20(2)                                --------->AHL20(1)  --------->AHL20(2)                ---------->DOF2 --------->AHL20(2)  <---------AHL20(2)<---------AHL20(2)           ----------->GT1     --------->AHL20(2)<--------ATHB1  <---------AHL20(2)                 -   <---------ZAT6       --------->At5g28300   --------->YAB1     --------->AHL20(2)      <---------AHL20(2) ----------->AGL3      ----------->GT1       <---------YAB1----------->GT1        ----------->HVH21 = ----------->AGL2   <------ZmHOX2a(1)       ------------>CBF  ------->TEIL    <---------YAB1<--------   ttatagagatagagagagaaaaggacggtaatattaaattgttgattacaataattaaataatgtatataatttaaaattatgtttgacatttttttctt  1414800                                --------------->AGL15                               --------->YAB1                              <---------YAB1                             <-----------GT1      --------->AHL20(2)             <---------ANAC58                            --------->YAB1        <---------AHL20(1)             <---------ANAC46                           --------->ICU4     --------->AHL20(2)                 <---------ANAC58                           <---------YAB1     <---------YAB1               <---------TOE1(3)                         --------->YAB1       <---------AHL20(2)           <---------TOE2(3)                        <---------YAB1       <---------AHL20(1)           <-----------GT1                        <---------AHL20(2)   --------->AHL20(2)           <---------DOF5.7(2)                  <----------DOF2<---------YAB1   <---------AHL20(2) <---------AHL20(2) -------------->AGL15   --------->AHL20(2)   --------->AHL20(1)      --------->AHL20(2)       <------ ===============================================MADS_MADS           <---------AHL20(2) <-----------GT1 ---GT1      ---------->DOF2<---------ICU4  --------->YAB1    ----------->GT1 <---------MYB52(1)   <-   ctctgtttttagtataaaagctttatataattatcattttagagaaatataattaattctaaaactgaaaattatttaacgttgtgtgattaccttcttt  1414900                                                                                      --------->ICU4                                                                                    >>>>>>>>>GT-2                                                             <---------YAB1       --------->At5g28300                                                          <---------YAB1          <---------MYB52(1)                                                        <---------ICU4           ----------->GT1    -                                                <---------ANAC58                 --------->LBD16  <--                                                <---------ANAC58      --------->GLK1(2)      <-------                                      <----------DOF2  --------->ICU4<---------ARR11(3)    <---------TOE2(3)                                  <----------DOF2 ----------->GT1    <---------GLK1(2)<---------YAB1- ----DOF2                     <---------MYB52(1)<---------ANAC46     --------->ARR11(3)--------->YAB1 ---------DOF2               <-------GAMYB<----------DOF2 <---------AHL20(2)   <---------LBD16  <----   tcttttttgtaactacaattttcaagtagtctgttactttctttcttttttcttgtaaatattattgtagagattttgttcaccggtaattataagatta  1415000                                                                      <---------------AGL15 -------->LBD16                                                 <---------ICU4               -------- -------LBD16                         <---------AHL20(2)       --------->AHL20(2)   --------->RAP2.6(3) --GLK1(2)                          <----------DOF2            <---------ATHB12    --------->MYB52(1) ---------->GT1                 --------->WOX13(1)        --------->ANAC46   ----------->GT1 <------- -------GT1            <------ZmHOX2a(1)             >>>>>>>>>GATA-1  --------------->AGL15  --------   tccggtttaatatagagaaatgtgaggaataagtcaatcttttattgcatttatagataaacccaataaatgctataactagtaaaaacggccatttata  1415100                                                                                       --------->ATHB51                                                                                       -------->ATHB1                                                                                       <---------ICU4                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(1)                                                     <---------ICU4      ---------->DOF2     <-------                                             --------->At4g35610 <---------ZAT6       --------->AHL20(2)    --------->DAG2                    <---------AHL20(2)  <---------ANAC58            --------->ICU4   ---------->DOF2                    --------->AHL20(2)  <---------ANAC58     -------->P<---------YAB1 ->AHL20(2)                      <------ZmHOX2a(1)   --------->ARR14(2) <---------AHL20(2)  <-------- --AHL20(2)                    <---------TOE2(3)     <---------ARR14(2) --------->AHL20(2)<---------- ->YAB1                 ---------->DOF2   <---------AHL20(2)     ----------->GT1      <---------YAB1   ttgagtaaagttggattttttatggctaaagtttaggaatttatattatctgccatatttgcttacagtgttaattaaagctaccaaaattattactttt  1415200  Previous    Next  AGI:  At5g04860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39924.1); contains domain Class I glutamine amidotransferase-like (SSF52317) Range:  from: 1411566    to: 1414678    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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