Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->TOE1(2)             <---------SPL7            <---------HSFB2a(1)            ------>ZmHOX2a(2)            --------->HSFB2a(1)            <---------HSFC1(2)           <------ZmHOX2a(2)          --------->ARR14(2)          <---------ARR14(2)        --------->LBD16             <---------GLK1(2)                             --------->ANAC58  <---------MYB52(1)              ----------->ARR10             <---------At4g35610     <---------ICU4 ---------ANAC58                  --------->ICU4 <---------ATHB12                 --------->ANAC58 ---------ANAC46 <---------HSFB2a(2)<---------ARR11(3)          --------->At4g35610    --------->ICU4 ---------ANAC58 --------->HSFB2a(2)--------->ARR11(3)--------->TOE2(3)     <----------ID1 >YAB1<---------LBD16    <-------TEIL<---------RVE1(1)--------->YAB1      ---------->DOF2   ttccgtttgccggatcgttcgagcacatacagagcaaagatttttagtcgaatcaagcttaatagtagctgaacataaaagacgaagcaaagattactca  1371100                                                            ------>ZmHOX2a(2)                                                           --------->CCA1(2)                                                           <------ZmHOX2a(2)                                                          <---------AGP1                                                          --------->ARR11(3)                                                          --------->AGP1                                                          <---------ARR11(3)                                                      ---------->DOF2                                                   <---------TOE2(3)      <---------O2                                                 ---------->DOF2          --------->O2                                             <---------HSFB2a(2)          --------->ANAC58              <------ZmHOX2a(1)              --------------->AGL15        ----------->HVH21        <-       <---------At4g35610                   <---------------AGL15        --------->ANAC46  ---------       --------->At4g35610                  <-----------------AGL2        --------->ANAC58 <------ZmHOX2a(1)   aatcgatttagcagaaggagcaagaagactataaatctccatcaattctagtaaaggaaagatctaagagcgagacacgacgcataagaaataggaaaga  1371200                                                                                 --------->ANAC58                                            --------->LBD16               ------>ZmHOX2a(2)                                            ------>NtERF2                --------->CCA1(2)                                          <---------LBD16               --------->AGP1                                         --------->MYB52(1)             <---------ARR11(3)                                       --------->HSFB2a(1)              --------->ARR14(2)                                       <---------HSFB2a(1)              --------->ARR11(3)    >>>>>>>                                      ------->TEIL                      <---------AGP1        >>>>>>>                                 ------>NtERF2                          <---------ARR14(2)    >>>>>>>                                --------->DEAR3(1)            <-----------RAV1(2)--------->ANAC58 --------MYB59                  ----------->HVH21         ---------->DOF2<------ZmHOX2a(2)    >>>>>>> ->DOF2                      --------->DEAR3(1)  <------ZmHOX2a(2)    ----------->ARR10      --------   gcctaacctcttcgtcaagagagacattacacctccgacgaacttccggcgatcatcgaacaaagcaggcgatagatctggagaagcaatttgagcggga  1371300                                        <---------TOE2(3)                                       <---------DOF5.7(2)                                       --------->MYB52(1) >>>E2Fe                             <---------MYB52(2)                            --------->ANAC58 >>>E2Fc        <---------WOX13(1)  --------->At4g35610                            --------->ANAC46 >>>E2Fd      --------->ATHB12      <---------At4g35610                            --------->ANAC58 >>>E2Fa      <---------ICU4   <---------------------WRI1                     --------->HSFB2a(2) --->GT1     <---------YAB1 <------ZmHOX2a(1) >>>>>>>>>TBF1--------->MYB52(1) <---------HSFB2a(2)   aaacgagtctgcctactgattgcagaagaaggacgcgaagctaacgaagaagaaaactgagtaacagagaagatggaactcgagaacgccattgaagttt  1371400                  <----------DOF2               <-----------GT1                                                   *TSS           <---------AHL20(2)                                                  <---------ANAC46        --------->ARR11(3)                                        <---------ANAC58     --------->YAB1        <---------ARR11(3)         <-----------HVH21        <---------AHL20(2) <---------ANAC58------        --------->AHL20(1)      --------->LBD16            --------->AHL20(2)  <---------ANAC58======        <---------AHL20(1)   ------>ZmHOX2a(1)   --------->TOE1(3)<---------ANAC46    <---------ZAT6     --------->YAB1   <----------DOF2            --------->TOE2(3)<---------ANAC58  ----------->GT1 <   gaaacaagaatattttttttctttctttctcctccgaagtcagagagaacaccttaatctataaaatggcgagagaaattggcgtttagtgataacaaaa  1371500                                    <-----------TGA1                                   <---------TGA1a                                   <---------ANAC55(2)                                   <---------bZIP60(1)                                   <---------bZIP60(2)                                   <---------ANAC58                                   --------->ANAC58                                   --------->bZIP60(1)                                   <---------TGA2(1)                                   <---------ANAC58                                   --------->O2                                   <---------O2                                   --------->TGA2(1)                                   --------->TGA1a                                   --------->bZIP60(2)                                   --------->ANAC55(2)                                   --------->ANAC58                                   ==================================================bZIP_DOF                                  ----------->STF1                  <---------At4g35610                  --------->At4g35610--------->TGA2(2)              <---------ARR14(2)  <-----------STF1         --------->At4g35610    ----------->HVH21         <---------At4g35610   <-----------HVH21                                        <---------AHL20(2)        --------->ALFIN1      --------->ALFIN1                                         <---------YAB1      <---------ANAC58      <---------bZIP60(2)                                       <---------AHL20(2)      <---------ANAC46   ----------->HVH21                                          <---------YAB1---      <---------ANAC58----------------------->TaNAC69(2)                         <---------AHL20(2) ---->DOF2    --------->ARR14(2)----------->TGA1                                 <---------AHL20(1) ============================================bZIP_DOF    --------->AtMYB61       --------->AHL20(2) ---------YAB1------->TEIL  <---------ANAC46          <---------ALFIN1    <----------DOF2   <--------   agatgatggagtgctgaatctgctgatgtgatgtgtgacgtcactatcgagatgctccacctatacatctactaagcttttattttatttttattttata  1371600                                                                                          <---------TGA2(2)                                                                                         ----------->HVH21                                                                                         ----------->TGA1                                                                                       --------->At4g35610                                                                                       <---------At4g35610                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                              <---------ICU4                                                                              --------->AHL20(2)                                                                              --------->ATHB12        --------->ANAC58                                                      -------->ATHB1<--------        --------->ANAC46                                                      <---------AHL20(2)        --------->ANAC55(1)                                                   --------->ATHB51        --------->ANAC58                                                      <--------HAHB4<--------    --------->HSFB2a(2)<---------ARR14(2)                                    --------->ICU4 <--------    <---------HSFB2a(2)--------->ARR14(2)                                    <---------ATHB51 -------->GT1     --------->AHL20(2)                --------->YAB1       <-------TEIL  ----------->bZIP910(2) -AHL20(2)       <---------WOX13(1)                <---------YAB1------->TEIL<---------ATHB12  <-----   tggtttctacaagtaactaattgaatatttgcaaattgctatagaataatgtgatcatagtgagacgaatgtagatgcaattatttgcttgctgacgttc  1371700                        --------->ARR14(2)                                                         --                        --------->ARR11(3)                                                      <----                        <---------ARR11(3)                                                <---------AHL20(2)                        <-----------ARR10                                                 --------->AHL20(2)                       --------->RVE1(1)                                                 --------->AHL20(2)                     ------>MYB46(1)                                                     <---------AHL20(2)                     ------>MYB83                     --------->ANAC58              <---------RVE1(1)                   <---------MYB59                    --------->ANAC46             <---------ARR14(2)      --------->ANAC46 --------->CCA1(1)              --------->ANAC58             --------->ARR14(2) -ANAC58        <-----------GT1               <---------At5g28300                  <---------ARR11(3) -ANAC46     --------->ANAC58                <-----------GT1                       <---------GLK1(2) -ANAC58     --------->ANAC58             <----------DOF2  --------->MYB52(1)      --------->ARR11(3) --TEIL--------->At4g35610      <----------DOF2  --------->ANAC46       <---------At4g35610   -------   aaacttctacgctgcaagttaccaaatatcttctcttttctattcttttaccctccaagccaatcggactggtttgctgtttgcagattttttaaattaa  1371800                                                            --------->ARR11(3)                                ---------->ID1    <---------TOE2(3)     <---------AHL20(2)                     --------->AHL20(1)          ---------->DOF2----------->GT1                     <---------AHL20(1)     ----------->GT1 <---------ARR11(3)               --------                     --------->ARR11(3)   ---------->DOF2   --------->GLK1(2)                --------    ---------->DOF2--------->ARR11(3)   --------->YAB1   --------->AHL20(2)        <----------DOF2 ------->TOE1(2)   --------->AHL20(1)   <---------AHL20(2) --------->CCA1(1)--------->AHL20(2)    --- -------GT1        <---------AHL20(1)   --------->AHL20(2) --------->RVE1(1)<---------AHL20(2)<------ -->AHL20(2)       <---------ARR11(3)--------->YAB1----------->GT1      --------->AHL20(2)   --------   acctgctaaagaattttaaaaaatattttgttttgtctctaataaaaagtttaaagtaaaaaaatcttgtataaaaaattaaaaacttttattcgttgac  1371900      ----------->GT1      <----------ID1     ----------->GT1   ---------->DOF2                                                                                --- ->WRKY45        >>>>>>>>>RAP2.2                                                          <---------GLK1(2) ->WRKY12      <---------ARR11(3)                                                        <---------HSFB2a(1) ------->DOF2  --------->ARR11(3)                                                        --------->HSFB2a(1) ---WRKY18(1) --------->RVE1(1)                               ---------->DOF2           --------->DAG2 ->WRKY38(1)  --------->CCA1(1)        ------->TEIL<---------------------WRI1     <---------LBD16<---   caaagaaaaggaaaaaatatctaaaaacaggggaaaacatgtatgtcaacttgggccattaaaccaaagaattgtagacgagtctggggaaaggttctca  1372000  Previous    Next  AGI:  At5g04740.1    Description:  ACT domain-containing protein. similar to uridylyltransferase-related [Arabidopsis thaliana] (TAIR:AT1G16880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70126.1); similar to Os12g0152700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066177.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) Range:  from: 1368543    to: 1371481    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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