Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                            <--------                                                                                       --------->ANAC55(2)                 <---------GLK1(1)                                                --------->WOX13(1)      --------->ANAC58                                                     <---------At4g35610 <-----      --------->ANAC58 <---------MYB52(1)                               <----------DOF2<---------ANAC55(2) -----ZAT6  --------->ZAT14              ----------->RAV1(2)   <---------ANAC46  ------>ZmHOX2a(2)   gtaagagtaagcactgaagaaacccgttgtgagagttttcttcgcctgcgataaaacttcaggcttcgtagtggctcttctgatctatcacttgatgatg  1340500                                                                     --------->REM1(1)   ---------->DOF2          <-----------GT1                          <---------ALFIN1              -- -----MYB46(3)       ------>ZmHOX2a(1)                  <----------DOF2                       <------ -YAB1         <---------DAG2            <---------ARR11(3)        <---------ALFIN1       ------>ZmHOX2a(1) ----YAB1      <----------DOF2           --------->ARR11(3)       --------->ANAC46   <----------DOF2   gttcacaaagtctcttccttttcctactatatacaatcccaaacatcttatccacagtcttttcatcccctacaccttcatttctcactttcctccgttt  1340600                                                                              --------->LBD16                                                                            <---------LBD16     <----      ---------->DOF2                                 <---------REM1(2)    <---------At5g28300<------    --------->LBD16        <----------DOF2      <---------ANAC58       <----------DOF2        <------  <---------LBD16     ---------->ID1            <---------ANAC58   <---------MYB52(1)    --------->ATHB12 --------->HVH21  <----------DOF2               <---------ANAC46  <-------GAMYB   <------ZmHOX2a(1) ---MYB52(1) <---------At4g35610--------->ZAT6  <---------LBD16  <---------MYB46(3)    <----------DOF2   tgtgaccggaaagtcatctactttgtcttctttctcactagaaacttgtttcgggctacaaggctggctgttacttttaccggaggagactttattgcct  1340700                                                                                                -----                                                                                                <----                                                      <---------At4g35610                       -----                                                      --------->ZAT2                           ------                                                      --------->At4g35610                     -------                                                --------->TGA2(2)                            --------                                               <-----------HVH21                            =========                                               <-----------TGA1                             <--------                                              --------->ANAC58                              ------>ZmHOX2a(2)                                              --------->bZIP60(1)                          --------->CCA1(2)                                              <---------bZIP60(1)                          --------->ARR14(1)                                              --------->bZIP60(2)                          ==========                                              --------->O2                                 <------ZmHOX2a(2)                                              --------->TGA1a                             --------->AGP1                                              --------->ANAC46                            --------->ARR14(2)                                              --------->ANAC58           --------->ANAC58 <---------ARR11(3)                                              ===============================bZIP_DOF ---------------                                              <---------ANAC55(2)        --------->ANAC58 <---------GLK1(2)                                              <---------O2             <---------ANAC58   --------->ARR11(3)                                              --------->ANAC55(1)      <---------ANAC58 ----------->ARR10                                              --------->ANAC55(2) <----------DOF2  --------->MYB59                      --------->ANAC58  --------->MYB46(3)     --------->SPL7   <-----------HVH21----         <---------YAB1                <------ZmHOX2a(2)       <---------ARR11(1)<---------MYB52(1) ------DOF2           --------->ANAC58<---------ARR14(2)       ------->TEIL  ------>NtERF2<---------ARR14(2) ---ANAC58            --------->ANAC46--------->ARR14(2)     <---------SPL7 --------->DEAR3(1)<------ ---ANAC58 <---------GLK1(2)--------->YAB1  <---------ALFIN1--------->DEAR3(1)  --------->TOE2(3)<---   ttggatttgttctgattcttcaaaacgctatcacaatctcgatccaccacgtcatgagctcgccgtacctttggctcgccaacgttaggccagatccggc  1340800                                       ------>MYB46(1)                                     <---------ALFIN1                                     ------->GAMYB                           <---------RAP2.6(2)                                          <---------ANAC58                          <---------At4g35610                                 <------NtERF2    --------->SPL7        <---------LBD16                                    ------>NtERF2   --------->MYB52(1)    <-----------RAV1(1)                                --------->ANAC58 ------>HVH21            <---------ATERF1(1)                                --------->ANAC58 -----ETT(2)            <---------DEAR3(1) --------->LBD16                  --------->ANAC46 ---->DEAR3(1)         ----------->RAV1(2)--------->ANAC46                --------->MYB52(1) --->ATERF1(1)        <-----------HVH21------>MYB83                      ----------->HVH21 -->LBD16            <---------ANAC46--------->AtMYB61                   --------->MYB46(3) ->TOE1(2) --------->ARR14(2)       <---------MYB55(2)                   ------->GAMYB  <---------ANAC46 ================HOX2a_HOX2a        --------->MYB46(3)                   --------->DREB2C(2) -LBD16    <---------ARR14(2)  <----------DOF2               ---------->ID1--------->RAP2.6(3) ================HOX2a_HOX2a------>NtERF2 --------->LBD16 <-------TEIL   --------->At1g77200 -->AGL1 ----------->HVH21--------->At4g35610          <---------MYB46(3)--------->DEAR3(1) -->NtERF2<------ZmHOX2a(1)<---------DEAR3(1)      <---------STY1(1)    --------->MYB46(3) ---ATERF1(1)       <------NtERF2 <-----------GT1  --------->STY1(1)    --------->DEAR3(2)        --- ------ATERF1(1)   <---------ATERF1(1) -------->P--------->TOE2(3)    <---------ALFIN1  <---------ANAC58   gacccgaacggaggacacgggctccgtctgcggctttaaccaccccgaaaaccctagtggttcgtctcattcccaccgacggcatctatgccgtgctcat  1340900                                       <----------DOF2                                 --------->ZAT2                               <---------ALFIN1                        --------->At4g35610  <---------ZAT14                        <---------At4g35610  --------->ZAT14              --------------->AGL15   <---------ANAC58             --------->ZAT6    --------->MYB46(3)             <-----------------AGL2   <---------ANAC58         <---------ANAC58   ----------------->AGL2                    <-----------GT1         <---------ANAC58   <-----------------AGL2                   <-----------GT1         ------>MYB46(1)      <---------MYB52(1)<---------GLK1(1)<---------WRKY18(1) <----------DOF2                 ------>MYB83 ------>ANAC46<---------------AGL15------->GAMYB       <------------CBF                    --------->MYB46(3)   acgactccgtttcttactctaactggagatgccacaactggcttgactgaactcagaaattggctttgttttaaacctcttcttcgatctatacccacta  1341000                                        --------->GLK1(2)                                       --------->ARR14(2)                                       <---------GLK1(2)                                       <---------ARR14(2)                                     --------->LBD16                                   ------->GAMYB                                 ------>MYB83                     <-----------GT1                                 -------->P                    <---------GLK1(1)            ---------                                 ------>MYB46(1)          ---------->DOF2      --------->ANAC58                         <---------HSFB2a(2)            <---------YAB1         --------->ANAC58                         --------->HSFB2a(2)         <---------AHL20(2)  ============================                 ------->TEIL  --------->AtMYB61    --------->AHL20(2)   <---------------AGL15              --------->ANAC58 <---------MYB111(1)<---------GLK1(2)      <----------DOF2  <---------TOE2(3)              --------->ANAC46--------->DEAR3(2)  --------->ARR14(2)     --------------->AGL15<------              --------->ANAC58--------->MYB46(3)  <---------ARR11(3) <----------DOF2   --------->AHL20(2)   atctctgtaaaaaaacacgaatttcttacagaaccaaccccgattctgaccagattttataaaagaaatcactttcttttcaaggaaaatttaagaaatt  1341100                                                                                   ---------->DOF2                                                                               <----------ID1                                                                       <-----------------AGL1                                                               --------------->AtSPL8                                                         <------ZmHOX2a(2)    -----------------------                                                     <---------HSFB2a(2)--------------->AGL15      <------------CBF    <---------ARR11(3)<---------ARR14(2) <---------ICU4 ----------->GT1 >ARR11(3)                <---------GLK1(2) --------->ARR14(2) <---------------AtSPL8     ---------->DOF2 =======================================================================================MADS_MADS  -- ------CBF          --------->ARR11(3) <-----------GT1  <---------ARR11(3)  ---------->DOF2       ---   gaaacggctattggaaggggaagagctagatactttcgatttaaccgattcgattcgagatcaaattagtactacccagaaaggaaaaagaagaaagaaa  1341200                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                             <---------AGP1                                                             --------->AGP1                                                             --------->ARR11(3)                <---------LBD16                              --------->ARR14(2)              ------>ZmHOX2a(2)                              <---------ARR14(2)             <---------GLK1(1)                               <---------ARR11(3)            <---------ARR14(3)                              <---------GLK1(1)            --------->ARR11(3)                           ------>ZmHOX2a(2)            <---------ARR11(3)                         <---------ARR14(2)      --------->ARR11(3) <--        --------->DEAR3(1)                             --------->ARR14(2)      <---------ARR11(3) --- ->ANAC81------>NtERF2 <------ZmHOX2a(2)              ===============HOX2a_HOX2a                  <-- ------->YAB1--------->GLK1(1)                        <------ZmHOX2a(1) ----------->GT1           --- -------->GT1<------ZmHOX2a(2)                        ================HOX2a_HOX2a     ---------->ID1   atgaaaatcgccgagatctctggagatcgaagaaaatttgagaaattcgattgggaggatcgagatctgttcatgggtataaatctttgttttttttttt  1341300                                             <------NtERF2                                             --------->At5g28300                                            <---------MYB46(3)                                           <---------DEAR3(1)       ---------->ID1                                          <---------ABI4(1)      <---------DAG2                                        <---------DEAR3(1)       <----------DOF2                                        ------>ZmHOX2a(2)      ------->TEIL -------HSFC1(1)                      --------->ARR14(2)    --------->ANAC58                        < ------>HSFB2a(2)               <---------REM1(1)           --------->ANAC58                       <- -------HSFB2a(2)        >>>>>>>>>TBF1<---------ARR14(2)    --------->ANAC46                      --- ------>HSFC1(1)      >>>>>>>>>TBF1  <------ZmHOX2a(1)    <-----------GT1                       <----   ctagaaacgagtagacatggtgaagaagaagaagatgaaggatcggcggtgaagatggtttcacgaacttttcgttttgacaagaagagagggaacagag  1341400  Previous    Next  AGI:  At5g04670.1    Description:  similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT4G32620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46523.1); contains domain PTHR14898 (PTHR14898) Range:  from: 1337840    to: 1340885    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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