Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->REM1(1)                                        --------->HSFB2a(2)           ------->GAMYB                <---------HSFB2a(2) --------->DAG2          <------------MYB.PH3(1)       <---------------AGL15        --------->MYB52(1)        <---------ARR11(3)       ---------->DOF2        <-----------GT1           --------->ARR11(3)     --------->ARR11(3)               -----------     --------->YAB1              <------MYB46(1)     ---------->DOF2                  --------->AHL20(2) ------->DOF2                    <------MYB83    <---------ZAT6                       <---------AHL20(2) ---->AtMYB61                   --------->MYB59----------->GT1 ----------->HVH21     --------->AHL20(2)   aaaagaatagtaacggtcttaagtactaaaatgttaggtcttctacaactagtgaaaaagataaagtgacagaaaaactcaaaacgatttaattgttaaa  1279400                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   <-                                             ------>ZmHOX2a(2)                                   ----                                           --------->ARR11(3)                                  <-----                                           --------->ARR14(2)                                 -------                                           <---------ARR14(2)                                 -------                                           <---------ARR11(3)  --------->ARR11(3)           <--------             --------->AHL20(2)   <---------AHL20(1)           <---------ARR11(3)       <---------GLK1(2)          --------->AHL20(2)      <---------ARR11(3)     --------->YAB1          --------->AHL20(2)--    <-----------GT1               --------->AHL20(1)     --------->HSFB2a(2)----------->GT1<--------- >GT1     --------->YAB1          --------->ARR11(3)  <----------DOF2--------------->AGL15<-------TEIL   aacgatttacaataaaaaaatcaattctcagttcaaaatattgtagatcgtctaagctttcagaatatatactaggttgagaaaaaaatagattcaccgt  1279500          <---------DEAR3(2)          <------MYB46(1)          <---------MYB46(3)          <---------SPL7         <---------DEAR3(1)         <---------MYB46(3)         <---------AtMYB61         --------->MYB59                                 ----------->GT1                    --------- --------HAHB4                                   <------MYB83                             <---------YAB1 -------->ATHB51                                 <------MYB46(1)                       --------->AtLEC2 ---------ICU4                                  ------------------------>ANAC81   --------->ANAC46 --------YAB1                               <---------ANAC55(2)                <---------ARR14(2) ----->YAB1                                 --------->ANAC58                   --------->ARR14(2) ------TGA1         <-----------GT1         --------->ANAC58               --------------->AGL15 -->DEAR3(1)    --------->ARR14(2)         <---------LBD16                <-----------------AG -->ANAC46<------MYB83                 --------->DAG2   --------->DAG2    <-----------------AGL1 -At5g28300<-------GAMYB               <---------------AtSPL3             =========================== ------->ICU4   <---------ARR14(2)    ---------->DOF2  ---------->DOF2    ----------------->AGL1 --GT1 <-----------HVH21           --------->YAB1----------->GT1         --------->MYB52(1)--------->ATHB12   cataattagggtcggtcggattttacaataaacccaaaaataaagtacggaaggtaaaaaagtaaaaaacacaattacccgaataggccatgctcattgg  1279600                                           ---------->DOF2                                          <---------ATHB12                                      --------------->AGL15                                      <---------------AGL15                                     ----------------->AGL2                                     ----------------->AGL3                                     <-----------------AGL1                                     ----------------->AGL1               <--------P            <-----------------AG                                --------->HSFB2a(2)        --------->ZAT6            ------->GAMYB                           <---------RVE1(1)        <---------ALFIN1         <<<<<<<<<TAC1                           --------->ARR14(2)       ---        --------->AtMYB61        <------------AtMYB77     <-----------GT1<---------ARR11(3)      <---       --------->MYB46(3)       ------>MYB83        --------->ANAC58     --------->ARR11(3)    ------     --------->ANAC46           ------>MYB46(1)---------->DOF2           <---------ARR14(2)  -------- -------------->TaNAC69(2)     --------->MYB52(1)   --------->ANAC58     <---------GLK1(2)   <------ZmHOX2a(2) =====================================================MADS_MADS  --------->ALFIN1        <---------HSFB2a(2)   ccatttcccaccactaggttagtacaaactgaccaactgtcccaataaagaaagacgaaattacaatgtgaggcagattttttgcattcttctcgatcaa  1279700          --------->bZIP60(2)          --------->ANAC58                                                                   --------        <---------ALFIN1                          --------->ANAC58                        <---------CCA1(2)     ----------->HVH21<---------ANAC58            --------->ANAC58              <---------YAB1  --------->DAG2      <---------ANAC46            --------->ANAC46             --------->ARR11(3) ---------->DOF2      --------->ANAC55(2)  --------->ANAC58            <-----------GT1   ------>ZmHOX2a(1) ------>YAB1          <---------ANAC55(1)  --------->ANAC58     ----------->GT1<---------ARR11(3) ------ATHB12         <---------ANAC58     --------->ANAC46    ----------->GT1--------->RVE1(1) --->WOX13(1)         <---------ANAC55(2) <---------TOE2(3)  ---------->DOF2  --------->CCA1(1) ---->CBF --------->ANAC58<----------DOF2--------->MYB52(1)  *TSS  --------->AHL20(2)   --------->TOE2(3)   tcagaaagtgacacctcatagattacgtctttttagttcttactaacgaaacacccaaacaaaaaaagataaattacaaaatatcattttccttatctta  1279800           --------->ARR14(1)           --------->GLK1(2)                                               <---------DAG2          --------->ARR14(2)                                               --------->AtMYB61          <---------GLK1(2)                                                --------->TOE1(3)     <---          <---------ARR11(3)                       --------->At4g35610     --------->TOE2(3)    <----        ----------->ARR10             ------>ZmHOX2a(1)                  -------->P           -------        --------->ICU4    <<<<<<<<<TBF1  ------>ZmHOX2a(1)            <------NtERF2<---------CCA1(2) <---------ANAC58      <<<<<<<<<TBF1 <---------ALFIN1   ------------------>SPL14--------->TOE2(3)---- <---------ANAC58   <<<<<<<<<TBF1  ------>ZmHOX2a(1) <---------ZAT18  --------->At4g35610   <------ZmHOX2a(2) ->TOE2(3)<---------ARR14(2) <<<<<<<<<TBF1         <---------At4g35610<---------At4g35610   <--------   ttgacttgtcaagattctcttcttcttcttcttcttcctcctcctccaaactcagttccctccgtccatggcagcaaccttacctctatctccgatcaat  1279900                    --------->MYB46(3)               <---------HSFB2a(2)          <---------DEAR3(2)          <---------MYB46(3)         <---------DEAR3(1)         <---------At1g77200         <---------DREB2C(2)       <-----------HVH21      <-----------RAV1(1)                                                                  <---------      <---------ANAC46                                                                     <---------LBD16   <---------MYB52(1)       ----------->HVH21           <---------ANAC58                 <---------WRKY18(1) ------ICU4    --------->HSFB2a(2)                 ----------->RAV1(2)                  --------->WRKY38(1) -----ATHB12  <---------LBD16             --------->ARR14(2)                            --------->WRKY12 -->WOX13(1)<---------ARR14(2)       --------->MYB52(1) <---------ANAC58                ----------->HVH21 ----->YAB1 --------->ARR14(2)     ----------->HVH21 ------>ZmHOX2a(1)              <---------MYB46(3) -ATHB12 --------->ETT(1) <----------DOF2 <---------ARR14(2)  --------->ATHB12  --------->ATHB12   catcagttgtgtcggttcgggaacaactctttgacgactcaccggttctgttctcctggcttcttgatttcttctccttgtttcattggtttgaccggaa  1280000                                                                                   ------>NtERF2                                                                                  <---------ALFIN1                                                                                 --------->MYB46(3)                                                                                 --------->ATERF1(1)                                                                                 <---------ABI4(2)                                                                                <---------ATERF1(1)                                                                                ------>NtERF2                                                                               --------->PCF2                                                                              <------NtERF2                                                                          <-----------HVH21                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                         <---------TGA2(1)                                                                         <---------TGA1a                                                                         --------->TGA1a                                                                         <---------O2                                                                         --------->O2                                                                         --------->TGA2(1)                                                                         <---------bZIP60(2)                                                                         --------->bZIP60(1)                                                                         ============================                                                                         <---------bZIP60(1)                                                                       <---------TGA2(2)                                                                      ----------->HVH21                                                                      ----------->TGA1            <--                 <---------ANAC58                  <---------ANAC46 <---------ANAC58              <--                 <---------ANAC55(1)               <----------ID1   <---------AtLEC2 --------->DEAR3(1)                 <---------ANAC46              --------->At4g35610  <---------ANAC58<------NtERF2 <--                 <---------ANAC58             <---------MYB46(3)<-------GAMYB<---------DEAR3(2)<-----                 --------->ANAC55(2)        --------->At4g35610 ===================MYC_MYB     <-----                 <---------ANAC55(2) ------>ZmHOX2a(2)   <---------ARR14(2)  <---------ATERF1(1)<----     <---------At4g35610 ---------->ID1     <---------At4g35610<-----------RAV1(1)--------->DEAR3(1)- --------AGL1 <---------MYB52(1)    --------->GLK1(1)    --------->ARR14(2) <---------DEAR3(1)<------   tgggctctgctactcagttacgtgctcgtcgttctctgatctcttcagcagttgcgacgaattcgctgttgcatgacgtcggagccaccgtggcagtgct  1280100      --------->ARR14(2)      <---------ARR14(2)   <---------ANAC46 ======bZIP_DOF ----MYB83                                          --------->WOX13(1) ----MYB46(1)                                    <-----------TGA1 -------ANAC46                                  --------->bZIP60(2) ----ANAC58                              ------>MYB83 ----ANAC58                              ------>MYB46(1)                                         <--- ------DOF2                 --------->HSFB2a(2) --------->ANAC58       -------->HAHB4    --------->ANAC58 -------->ALFIN1            <---------HSFB2a(2) --------->ANAC58       <---------ICU4    --------->ANAC58 ---MYB46(3)  <----------DOF2   <-----------ARR10<-----------HVH21     --------->YAB1    --------->ANAC46   tggtggagcatacgcgcttgtcttaagcttcgagagtctcaccaagcgaaacgtcattcaacaggtctcttaataatcgttttagttatccacacaattt  1280200                                                            <---------YAB1              --------->ICU4                                               --------->HSFB2a(1)                      <---------ATHB12                                               --------->HSFC1(2)                       <---------YAB1                                               <---------HSFB2a(1)          <---------ICU4          <  <---------MYB52(1)                           <---------HSFC1(2)          --------->ICU4--------->YAB1 --------GT1                             ---------->DOF2    <---------ANAC46--------->ATHB12    -----   ctccgtttacaattccagttttattcgaacaccactatatgttgaaagaagtttctcaagttgtgtttgcagtagtactcattagaaacaatgataagcc  1280300  Previous    Next  AGI:  At5g04490.1    Description:  VTE5 (VITAMIN E PATHWAY GENE5); phosphatidate cytidylyltransferase/ phytol kinase. Identical to Phytol kinase 1, chloroplast precursor (VTE5) [Arabidopsis Thaliana] (GB:Q9LZ76;GB:Q84WC0;GB:Q8LF61); similar to phosphatidate cytidylyltransferase family protein [Arabidopsis thaliana] (TAIR:AT5G58560.1); similar to Probable phytol kinase 1, chloroplast precursor (GB:Q2N2K1); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) Range:  from: 1279761    to: 1281670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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