Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->AHL20(2)                                                            <---------AHL20(2)           <---------AHL20(2)                                                         <---------ICU4   ------>ZmHOX2a(2)                                                        --------->ICU4   <------ZmHOX2a(2)                                                      --------->YAB1    <---------ARR11(3)     ---------->DOF2         ----------->GT1         --------->AHL20(2) --------->ARR11(3)  <---------ANAC58       <---------MYB46(3)   ===================================HOX2a_HOX2a  <---------ANAC58   <---------ANAC46         ------>ZmHOX2a(1)         --------->AGP1----------->GT1 ---------DOF2       <---------ANAC58         ==================================HOX2a_HOX2a      <--- -->CCA1(2)          <---------ANAC58        --------->TOE2(3)  <---------YAB1    ------->TEIL   <---   gctttcttgaagcgcaaattgatgcgttggatagaaaaattgatcatcctcataaataaaaattatatgaatgagatctatatgtatatagttaattttg  1243400                                         --------->YAB1            --------->TOE1(3)           <---------YAB1            <----------DOF2          <---------AHL20(2)            --------->TOE2(3) ----------->GT1     ---------->DOF2      <-----------GT1    <---------AHL20(2) <---------ICU4                         <---------AHL20(2) <---------TOE1(3)      <---------AHL20(1) <---------YAB1                        <---------YAB1 <---------TOE2(3)      --------->ARR11(3)--------->ARR11(3)                   <---------ZAT6 <---------YAB1         <---------ARR11(3)<---------ARR11(3)             --------->ATHB12 ------ANAC58         ------->TEIL  --------->AHL20(2)                  <-------TEIL ------ANAC58      ----------->GT1  <---------AHL20(2)      <---------ANAC46  <---------YAB1    <----   cttaagattaacaactttaaaatgtatatatttagtaattttatgatcatttcaaaggcattgtgtatttgaaattcattagtattattttgtagttagt  1243500                                                                                             <-------             <---------ICU4                                                                  --------            --------->ICU4                                                                   <-------          --------->YAB1                                                        <------MYB46(1)         <---------YAB1                                                         <---------MYB46(3)         <---------ATHB12                                                     <--------P     --------    ------>ZmHOX2a(2)                                                       <-----------RAV1(1)   <------ZmHOX2a(2)                                                       <-------MYC3      --------  --------->ARR14(2)                           --------->GLK1(1)           ------->MYC3 --------->HSFC1(2)  <---------ARR14(2)       <---------AHL20(2) <---------GLK1(2)--------->MYB52(1)<-------GAMYB  --------->ARR11(3)      --------->AHL20(2)  <---------ARR14(2)  ------->GAMYB --------->MYB55(2) --  <---------ARR11(3)  ------->GAMYB----------->GT1  <---------ANAC58    <---------ALFIN1<---------HSFC1(2) <---------GLK1(1)   --------->ANAC46    --------->MYB52(1)   ------>ZmHOX2a(1) <------MYB83 <------- --------->GLK1(1)<---------WRKY12<---------WOX13(1)<---------ANAC58 --------->AtMYB61  <---------HSFB2a(1) -----ZAT6<--------HAHB4  <---------AHL20(2)  --------->ARR14(2) --------->MYB46(3)     --------->HSFB2a(1)   gagagatccctataattatgtcaacgaaataaatagattgaaaaaacagatttgccttgcattcctaacgacctccacatgttggttagaaccttctaga  1243600                                 --------->MYB52(1)                                 ------>MYB46(1)                               <---------MYB46(2)                              --------->ANAC55(2)                              <---------ANAC55(2)                          <-----------HVH21                         --------->ALFIN1                       --------->ANAC55(2)                            <-----------HVH21                       <---------ANAC46                               <-----------TGA1                       --------->O2                                  --------->bZIP60(2)                       <---------ANAC58                              --------->DEAR3(1)                       <---------ANAC55(1)                        <---------ALFIN1                       <---------ANAC58                          --------->ABI4(1)                       <---------bZIP60(2)                       <---------ABI4(2)                       <---------TGA1a                           <---------SPL7                       --------->TGA1a                           --------->ZAT14                       <---------O2                              <---------ZAT14          --------->STY1(2)   --------->At4g35610          --------->ARR11(3)          <---------STY1(2)   <---------At4g35610         --------->RVE1(1) --------AGL15      ----------->HVH21       <-----------HVH21  --------->ANAC46 ------->AGL15    ===============MYC_MYB    <-----------TGA1  <---------At5g28300 --HSFB2a(2)      ----------->bZIP910(2) <---------At5g28300 <-----------GT1 ->HSFC1(1)       <-------GAMYB<---------MYB111(2)    --------->AHL20(2) ->HSFB2a(2)     --------->ALFIN1------>MYB83        --------->AHL20(2)                 ------------>CBF ------->YAB1  <---------ANAC58<---------MYB59       --------->YAB1 --------->DEAR3(2)<-----------GT1 --HSFC1(1)    <---------ANAC58<---------MYB111(1)--------->YAB1--------->DEAR3(1)   <---------CCA1(2)   atcagaaacagtagctagggtgttgacgtgtcacctaactagataccgtcactaataaaaatatcaccgcaccgtcaccgaaaacttatatccaatctct  1243700                                 <---------ANAC58                                 <---------ANAC55(2)                     ---------->ID1                                 --------->ANAC55(2)                    <-----------GT1  <-----------GT1                                 <---------ANAC46                   <------------------------ANAC81                            --------->ANAC46                 ------>ZmHOX2a(1)   <-----------GT1  ---           <---------ARR11(3)    <---------ANAC58   <----------DOF2<----------DOF2  <----------DOF2           --------->ARR11(3)   ------>NtERF2 <----------DOF2<----------DOF2 <----------DOF2<--------   <---------ANAC46    --------->ZAT14    <----------DOF2  *TSS  ---------->ID1 <---------CCA1(2) <--   caccttcgtggaagattttaaaacctgtactcgctgcgtaatttctttcttttgctttaaatcctttttctttttttctcttttatctttttttcttttc  1243800                                                                                             --------     <---------ANAC58                                                                        <-------     <---------ANAC46                                                                       ---------     <---------ANAC58                                                                       <--------  <---------MYB52(1)               <---------At4g35610                                      <--------  <--------P                       <---------CCA1(2)                                        --------- <-------GAMYB                  <-------TEIL                                               --------->ARR11(3) ------>LBD16               ------>ZmHOX2a(2)                      <----------DOF2         <---------ARR11(3) --DOF2                 <---------YAB1                    <-----------GT1     --------->TOE2(3) -------LBD16         --------->YAB1                     <-----------GT1      --------->TOE1(3)   cacggttgcttaattccaatgccatcgtgatcgattcatctctctctctctcttccaattttcccaattcttttttaaaaccctaatttttcagatatct  1243900                                                                                                =====                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                   <---------ANAC46                                                                                   --------->MYB52(2)                                                                                   <---------MYB46(3) <---------ARR11(3)                                                                <---------bZIP60(2) ->ARR11(3)                                                                        <---------ANAC58 --ARR11(3)                                                                      <-----------HVH21 >GLK1(1)                                                 --------->ARR14(2)   <---------MYB46(3)<--- -RVE1(1)                                                 <---------ARR14(2)--------->ATHB12 -------- -GLK1(1)                                       <----------DOF2           <---------WOX13(1) -------- >RVE1(1)                                   <---------MYB52(1)      <-----------GT1<---------ANAC58   gattatctcttgtatttcttctactcgatttgctcccataaaaacccttactttcttcaagttctggttttcaccgattgatgggtcgtggctcagtgac  1244000       ----------->RAV1(2) <---------ANAC58 <---------ANAC58 =================================MYC_MYB -----ANAC58 -----ANAC46              ----------->HVH21 -----TGA1a               --------->ANAC46 -----ANAC58             <---------MYB55(2) ---->TGA1a              --------->DEAR3(2) -----O2                 --------->MYB46(3) ---->O2 ------>ZmHOX2a(1)------->GAMYB -----TGA2(1)         <-----------GT1 ---->TGA2(1)--------->ARR14(2) ---->bZIP60(1)   <---------MYB52(1)                   --------->TOE1(3)    ------->GAMYB -----bZIP60(1) <---------ANAC58      --------->ARR11(3)                   <---------MYB52(2) -----bZIP60(2) <---------ANAC46      --------->ARR14(2)                   --------->MYB46(3) ----->STF1  <---------ARR14(2)       <---------ARR14(2)           --------->ARR11(3) --------HVH21  <---------ANAC58     <------ZmHOX2a(1) --------->TOE2(3) ----------->RAV1(1) --->TGA1--------->LBD16--------->ANAC46     <---------ZAT18       <---------ARR11(3) --->HVH21<---------TOE1(2)--------->MYB52(1)--------->ZAT18    --------->SPL7    <----------DOF2   gtcgcttgctcctgggttccgttttcacccgacggatgaggaacttgttcgctactaccttaagcgtaaggtctgcaacaaaccctttaagttcgatgct  1244100         <---------DDF1         ----------->RAV1(1)                       <----------DOF2        --------->DEAR3(1)                     --------->REM1(1)        --------->DEAR4(1)                ----------->GT1        --------->At1g77200             <-----------RAV1(2)        --------->DREB2C(2)           -------->P   <---------DAG2       --------->DEAR3(2)           ------>ZmHOX2a(2)    ----------->HVH21              <------ZmHOX2a(2)   <-----------TGA1               <---------ARR14(2)   <-----------HVH21              --------->ARR11(3)                        ---------->ID1  --------->ANAC46                <---------ARR11(3)                      <-----------RAV1(1)  --------->ANAC55(2)             --------->ARR14(2)                 <----------DOF2  --------->MYB59   atttccgtcaccgacatatacaagtctgagccttgggatctaccaggttacaactttttctctcaatctctcttttttgttgtctagttagatcgaatta  1244200                                --------->ATHB12                              <---------WOX13(1)                            --------->ATHB12                   <---------HSFB2a(2)                   --------->HSFB2a(2)               --------->REM1(2)     --------->DAG2                  ------>ZmHOX2a(2)             <---------ANAC58          ---------->DOF2           <                <---------ARR11(3)              <---------ANAC58     --------->ZAT2        <---------                --------->ARR11(3)     <---------WOX13(1)            <---------At4g35610   ----------          <---------YAB1   <---------YAB1       <---------ANAC46     <---------ZAT2        ----------       --------->ICU4  <---------GLK1(1)      <---------ANAC46       --------->At4g35610   <---------   tggagcttgattatgaatgatctagaattctgattgattcgattgattttgtgtgtgtatagataagtcgaagctgaaaagtagagacttggaatggtac  1244300  Previous    Next  AGI:  At5g04400.1    Description:  ANAC077 (Arabidopsis NAC domain containing protein 77); DNA binding. similar to ANAC051/ANAC052 (Arabidopsis NAC domain containing protein 51, Arabidopsis NAC domain containing protein 52), transcription factor [Arabidopsis thaliana] (TAIR:AT3G10490.2); similar to unknown [Populus trichocarpa] (GB:ABK93555.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 1241556    to: 1243359    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g04410.1    Description:  NAC2 (Arabidopsis NAC domain containing protein 78); transcription factor. Identical to NAC domain-containing protein 78 (NAC2) [Arabidopsis Thaliana] (GB:Q84K00;GB:Q84UG1;GB:Q9LZ84;GB:Q9SNW1); similar to ANAC053 (Arabidopsis NAC domain containing protein 53), transcription factor [Arabidopsis thaliana] (TAIR:AT3G10500.1); similar to unknown protein [Arabidopsis lyrata] (GB:AAN46247.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 1243759    to: 1246685    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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