Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------->PIF5                                                                                     ------->MYC3                                                                                     <-------PIF5                                                                                     <-------MYC3                                                                                     <-------MYC2                                                                                     ------->MYC2                                                                                    <---------ANAC46                                                                                    =================                                                                                    =================                                                                                    <---------bZIP60(2)                                                                                    --------->O2                                                                                    <---------O2                                                                                    --------->TGA1a                                                                                    <---------TGA1a                                                           --------->At4g35610   ----------->HVH21                                              <---------ANAC58                  ------>ZmHOX2a(2)                     <---------TOE2(3)        --------->ANAC55(2)              <---------GLK1(1)                     <---------TOE1(3)        <---------ANAC55(2)             <---------ARR11(3)                    ---------->DOF2           <---------ANAC58                <---------AGP1                    <---------DOF5.7(2)       <---------ANAC46               <---------CCA1(2)                <------MYB46(1)        <------MYB83        <---------At4g35610--------->ARR11(3)                <---------MYB46(3)     <------MYB46(1)<------MYB46(1)    <---------bZIP60(2)                <------MYB83          --------->MYB59 <------MYB83       <---------ANAC58                ----------->GT1    <---------STY1(2) --------->MYB59     <---------ANAC46        <-----------RAV1(1)  <---------AHL20(2)  --------->ATHB12        <---------ANAC58   ---------   tgctccaaaactgtgggctggttaaagttagtttattagctaggtaatgcgtgattaggtcatctacacatagtgacttggatctcacgtggaataaagc  1191900                   ---------->DOF2            <---------AHL20(1)    --------->ARR11(3)                      --------->At4g35610    <---------ARR11(3)                      <---------At4g35610   <---------GLK1(1)              --------->AHL20(1)   --------->GLK1(1)              <---------AHL20(1)               --------->AHL20(2)   <---------CCA1(2)              --------->ARR11(3)              <---------ICU4                ----- ==bZIP_DOF <---------AHL20(2)  --------->AHL20(1)               --------->ICU4            --------->ANAC58 ==bZIP_DOF --------->AHL20(2)  <---------ARR11(3)    <---------ARR14(2)    ------->TEIL   --------->ANAC58 ->DOF2     --------->AHL20(1)  <---------AHL20(1)    --------->ARR14(2)   <---------AtLEC2----------   ttctgatatcttattttattgtaaagctaaacaatatatattgatcagctaaaacatattcgatgtaatttttatatgcatgttcaaattttcaagtaaa  1192000                  <----------ID1                  ----------->GT1            <---------YAB1           ------>ZmHOX2a(2)             <---------YAB1         --------->AGP1                 --------->AHL20(2)                         ------->TEIL         <---------ARR11(3)             <---------AHL20(2)                    <------ZmHOX2a(1)         --------->ARR11(3)             --------->AHL20(1)             --------->TOE1(3)        --------->GLK1(1)               <---------AHL20(1)             --------->TOE2(3)    <-------- ---->ICU4<------ZmHOX2a(2)            --------->YAB1         <---------ICU4<---------TOE2(3)   ----- ->GT1  <---------GLK1(1)  --------->ANAC46              <-----------GT1  ---------->DOF2   ---------   aattggcaagagatcttattgggaaaaaccctcaactacaattataattgtttttttttttgcctcattacaagcttaaaggatgtatttatagtataca  1192100                                        ------>ZmHOX2a(2)                                        <-------TEIL                                       <------ZmHOX2a(2)                                      --------->ARR14(2)                                <---------AtMYB61                             <---------MYB46(3)                             --------->ATHB12                            --------->WRKY18(1)                           <-----------HVH21                          <------MYB46(1)                          <------MYB83<---------ARR14(2)                 --------->PCF2      ---------->DOF2     <---------DEAR3(2)                        <---------ANAC58 ---------->DOF2         <---------DEAR3(1)       --------->MYB52(1)<---------ANAC58 -ZAT14                  <---------MYB46(3)   --------->At4g35610   <---------ANAC46  >>>>>>>>>CBP60g ------>GT1             <--------P  <---------MYB46(3)              <---------bZIP60(2)          <--- >ZAT14           <-----------GT1<---------MYB46(3)              <---------YAB1       >>>>>>>>>SARD1   gaaaaaagaaaagacttatttttctggtcggtcattggtggatccatgagcttaacagaataaacttatgacttgggcccatagagaaatttgggcctag  1192200                                                             <------NtERF2                                                      <---------O2                                                      --------->O2          --------->AtMYB61                                                 <----------DOF2         ------->GAMYB                    --------->At4g35610       ------->TEIL   <---------------AtSPL3                    <---------YAB1          <---------ZAT18  --------------->AtSPL8                  <---------ICU4            <---------ZAT14<---------ANAC58 <---------ALFIN1                  --------->YAB1            --------->ZAT18<---------ANAC58*TSS                 <---------ATHB12         --------------->AtSPL8         --------->AtMYB61               --------->WOX13(1)         <---------------AtSPL8        --------->MYB46(3)           ----------->GT1               <---------ANAC46  <---------ANAC46--------->MYB46(3)  <-----         <-------GAMYB      <----------DOF2<---------ZAT6 <------NtERF2 <---------MYB55(2)     <-----        <-----------RAV1(1)<----------DOF2<---------------AtSPL3   --------->TOE1(3)  <---------TOE2(3) ------AGP1<---------MYB46(3)<---------MYB52(1) <---------DAG2     --------->TOE2(3)  <---------TOE1(3)   gtctgggcctctgttgttaatcatcagagcctttaggcacttgtagtgtacctttctcgtggcgtagtacctcaaccaccaccattttagggtttcttcg  1192300                                                                                         <---------ZAT14                                                                        --------->HSFC1(1)                                                              <---------ANAC46           --------->ZAT14                                                              <---------ANAC58  <---------YAB1                                                  <---------At4g35610   --------->HSFB2a(2)    --------->YAB1                           ----------->GT1  <---------ANAC58<---------AHL20(2) ----ANAC58                     <---------YAB1    --------->At4g35610   <---------HSFC1(1) ----ANAC58      <-----------------------TaNAC69(2)    ------->TEIL     <---------HSFB2a(2)   <------   tgccattgatattttgagaggcgaaggaaacaatacgattcagagagaggtaagatgaatctattcgtgtaattctagaattaatatcgagtttagtcgt  1192400                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                            <--------                                                                                            <-------GAMYB                                                                                           <---------DEAR3(2)                                                                                          <---------DEAR4(1)                                                                                          --------->ETT(1)                                                                                          <---------At1g77200     <---------AHL20(2)                                                                   <---------DREB2C(2)   <---------RVE1(1)                                                                      <---------DEAR3(1)   <---------CCA1(1)                                                                     <---------ORA47(1)  --------->ARR11(3)--------->TOE2(3)                                            <------ZmHOX2a(1)  <---------ARR11(3)--------->TOE1(3)                           <------NtERF2  <---------TOE1(2)<---- ---MYB46(3)    --------->WRKY12                   ----------->GT1 ---------->DOF2     <-----------RAV1(1)   tggagatttttttgttcgtttacctcaatttgttttgttttctgtgaatagacgagtgaaaatggctgcaaaagaaggtagtaggatttttgtcggtggt  1192500      <------NtERF2                                                 --------->At4g35610     --------->LBD16                   <-----------GT1              <---------At4g35610   <---------LBD16                 <----------DOF2                 >>>>>>>GRF7 -->MYB55(2)                    <---------ARR11(3)                 --------->MYB59 ---MYB46(3)                    --------->ARR11(3)                 <---------------AtSPL8 --AtMYB61            --------->ARR11(3)       <---------ANAC46    --------------->AtSPL8 -MYB52(1)----------->HVH21 ---------->DOF2--------->At4g35610    <-----------RAV1(2) ------DOF2           <---------ARR11(3)<---------At4g35610     <-----------HVH21   ttatcgccggaagtgacagatagagaccttgaaagagcttttagccgcttcggagacattctcgattgtcaggtaccaatttgaaatttttgttctatgt  1192600                   <------MYB46(1)                   <------MYB83                  <---------------AtSPL8                  <---------MYB46(3)                  --------------->AtSPL8                  --------->MYB59                  --------->MYB111(1)                  --------->MYB46(2)                  --------->MYB111(2)                       --------->ZAT14                 <---------MYB55(1)                      <---------ANAC58                 <--------P                              <---------ANAC58               <------MYB83 <---------AHL20(2)     <---------ANAC58               <---------MYB46(3)             --------->YAB1<---------ZAT14              <---------AtMYB61    <---------ANAC58<---------ANAC46            --------->REM1(2)<---------YAB1  <---------YAB1 --------->ZAT18                        <- ---------->ID1<------MYB46(1)     <---------ANAC58<---------ANAC58   ------>ZmHOX2a(1)       -------   tttgttcttctctgtgtaggttggtactatttttattccttgagtttatcatagcttgtgcctgcactagtcctatgaaatttagagattgttatctaaa  1192700                                                                              ----------->GT1                                                                              ------>ZmHOX2a(2)                               <---------YAB1                             ----------->HVH21                              <---------AHL20(1)                        <---------At4g35610                              <---------ARR11(3)                        --------->At4g35610                              --------->ARR11(3)                   <---------ANAC58   <---------YAB1             --------->AHL20(1)                   <---------ANAC46 ---------DOF2              ------->TEIL                 ----------->GT1<---------ZAT2 --->DOF2                <---------YAB1             ---------->DOF2<---------ANAC58   gctttgtgataagaattgaacatgtctatgaatatttttggaatgttttaagttgaaagtggtatatttgcttgagctgatcgtgaaaacatatacttga  1192800  Previous    Next  AGI:  At5g04280.1    Description:  glycine-rich RNA-binding protein. similar to glycine-rich RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G60650.1); similar to glycine-rich RNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G60650.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO68882.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA recognition motif, glycine rich protein (InterPro:IPR015465); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 1192275    to: 1195663    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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