Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ===================HOX2a_HOX2a                                  ------------>MYB.PH3(1)                                  <---------ARR14(2)                     --------->YAB1                                  --------->ARR14(2)              --------->WOX13(1)                                  --------->GLK1(2)           <------ZmHOX2a(1)                                 <---------GLK1(2)<------ZmHOX2a(2) <---------ATHB12                              --------->YAB1  =======================HOX2a_HOX2a----------->GT1                        --------->ZAT6        <------ZmHOX2a(2) <------ZmHOX2a(2)      --------->GLK1(2) --YAB1               --------->YAB1  <-----------HVH21   ---------->DOF2--------->TOE2(3)    -------   attcaaaagactaaacttcttcaatgacactataagaatctgttaccgatcgatcaaggcaaaaggatcaatctttcttaatcagtgaaattctaagaac  1184400                      <-------TEIL                    <---------GLK1(2)              <-------TEIL<---------ICU4                   ---------->DOF2             --------->CCA1(2)                   ----------->RAV1(1)                                -          <---------ATHB12--------->ZAT6        <----------ID1   --------->LBD16           <---------        ---------->DOF2--------->YAB1       XXXXXXXXXXXXXXXXXXXX>MIR863-3P              --------->ZAT18 -->ARR11(3)<---------GLK1(2)             ---------->DOF2--------->TOE2(3)              <-------TEIL<   tagcaaaccccaaagattcacagattcatcactactactagttcaaaagagcaacaaaacataaatccccaaatgcttcaaattcagaggtacacagggg  1184500                                                                       ------>ZmHOX2a(2)                                                                     <---------ARR11(3)                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                    --------->ANAC58                                 <---------AGP1     <---------ANAC55(2)                                            <---------CCA1(2)     --------->ANAC46                                        --------->ANAC46     <---------ANAC58------>MYB46(1)                    ======================HOX2a_HOX2a     --------->ANAC55(2)                                <------ZmHOX2a(1)     <---------ANAC58------>MYB83        =====================================HOX2a_HOX2a -------->At4g35610 --------->ANAC58     <------ZmHOX2a(1)   --------->ANAC58   --------->ANAC58 --RAV1(2)<---------YAB1       ------>ZmHOX2a(1)    <-------TEIL----------->RAV1(2) ---------At4g35610--------->MYB46(3) <-----------RAV1(2)    --------->ANAC58   --------->ANAC58   agagcttacgttactattggaccagccagagtcctcaacatcaggagcataagatgcaggaacacgacctggatctacaagaacgcaaattgagagcgag  1184600                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                --------->ZAT2                                   ----                                                --------->At4g35610                              ----                                                <---------At4g35610                              <---                                                ----------->RAV1(2)                              <---                    <---------At4g35610         <---------ZAT2           --------->YAB1          ----                    --------->At4g35610    <-----------GT1              <---------ATHB12         ----                 ---------->DOF2      --------->AHL20(2)            ------->GAMYB                <---            ------>NtERF2             <---------AHL20(2)          -------->P                    -----           --------->ANAC58       <---------ANAC58                ------>MYB83                -------           --------->ANAC58       <---------ANAC46              --------->AtMYB61             -------           --------->ANAC46       ----------->GT1              --------->MYB46(3)            <-------          <-----------------------TaNAC69(2)  <-----------RAV1(2) ------>MYB46(1)      --------->MYB52(1)         --------->CCA1(2)        <---------ANAC58     <----------DOF2--------->WOX13(1)    ---------   aagagacagagagacgccaataagctgaagagtaaggcgtttaatttcccagctgagctttgtaaaccaacccaatcatcgatgaaaacaaacagtgtga  1184700      --------->ANAC58      --------->ANAC58      --------->ANAC46      --------->ANAC55(1) ------ANAC58 ------ANAC55(2)                                         ------>NtERF2                <---------ANAC46 ------ANAC46                                           ----------->HVH21             <---------ANAC58 ----->ANAC58                                           --------->ANAC46              <---------ANAC58 ------->GT1                                        <---------GLK1(1)             --------->LBD16 ----->ANAC58                                     <---------GLK1(2)         ------>ZmHOX2a(2) ----->TGA2(1)                              --------->HSFB2a(2)            <------ZmHOX2a(2) ------ANAC58                               <---------HSFB2a(2)            --------->GLK1(1) ------TGA2(1)                             ------>ZmHOX2a(2)               <---------GLK1(1) ----->bZIP60(1)                         <---------ARR14(2)               <---------AGP1   --------->ZAT14 ----->ANAC55(2)                      --------->LBD16   <---------ETT(1)  <-----------ARR10<---------ZAT18 ------bZIP60(1)                     <---------LBD16<---------HSFB2a(1)   --------->ARR14(3) ------>STF1                        <---------LBD16--------->GLK1(2)      <---------ARR14(3) ---->TGA1                        <------ZmHOX2a(1)--------->ARR14(2)     <---------ARR14(2) ---->HVH21           <---------GLK1(2)  --------->ARR14(2)               --------->ARR14(2)      --- ----HVH21    <-----------HVH21   ================HOX2a_HOX2a             --------->ARR11(3)      --- >ALFIN1     --------->ANAC46 ---------->DOF2   ----------->ARR10 *TSS    <---------ARR11(3)      <--   cgtaatacacgaaacccatcaccagaatcaccaaaaggaccgggatcgagaagaatctccgacaactcatcgccaagatctctccgtggctcgtgaactc  1184800             --------->KAN4(2)        <------MYB83                                       <---------HSFB2a(2)        ----------->GT1                                    --------->HSFB2a(2)        <------MYB46(1) ------>NtERF2                     ----------------->AGL1                   <-       --------->MYB59 --------->ANAC58               --------->HSFB2a(1)                          --       <---------AtMYB61<------NtERF2                 <---------HSFC1(2)                 <---------ANAC58     <---------MYB52(1)--------->ANAC58               <---------HSFB2a(1)                <---------ANAC58 -------->HVH21       --------->DEAR3(1)              --------->HSFC1(2)                 <---------ANAC46 ------>ETT(2)        --------->MYB46(3)          ----------->GT1----------->GT1         <---------AtLEC2 -------ETT(2)    ------>ZmHOX2a(1)          ------->GAMYB----------------->AG      --------->ARR14(2)   tcgaccggtttggtttattcctcgcccgcccaaatttgatatggtaaccgaatcgaaatttccaaaactgaaaaataagttagtcaaatttgcttgaaac  1184900              --------->AHL20(2)           <---------AHL20(1)           --------->AHL20(1)           --------->AHL20(2)           <---------ARR11(3)                 --------->MYB52(1)                                  <--  <---------ANAC58                         --------->ANAC58                                       <--  <---------ANAC55(2)                      --------->ANAC58                                 <--------  <---------O2<---------AHL20(2)      <---------------AtSPL8                     --------->ATHB12<---  --------->ANAC55(2)            <---------DAG2                                 --------->ARR11(3)<--  <---------ANAC58               <----------DOF2                           --------->At5g28300 <----- --------ARR14(2)        <---------MYB59   --------->ANAC46           <---------ZAT14       <-------- ------->ARR14(2)  --------->ANAC46   <---------------AtSPL3         <----------DOF2     <----------DOF2   gaatacgtggcaatattttattcgctacttaactactttacaagtacgaaacgggctcagtactaaatgggcttcactgtaagttattgggcttatggtg  1185000                                       <---------MYB59                                       <---------------AGL15                                       --------------->AGL15                                      <-----------------AGL1                                   <---------RAP2.6(2)                                <---------AtMYB61        --------->ICU4        --------->CCA1(2)       <-----------RAV1(1)    <---------ICU4     <---------YAB1         <---------ANAC58          --------->ICU4 -------ANAC58              <---------ANAC58        --------->YAB1 -------ANAC58      --------->AHL20(2)----------------->AGL2 ---RAV1(1)         --------->AHL20(1)<-----------------AGL2 ---NtERF2          <---------AHL20(2)<-----------------AG <---------TOE2(3)                        < -------ANAC46     <---------AHL20(2) ----------------->AGL1 <------ZmHOX2a(1)              <-------- ----RAP2.6(2)     --------->AHL20(2)<------NtERF2 --------->ICU4           <-----------GT1 <-------- -AtMYB61      --------->ICU4<----------DOF2       <---------YAB1          --------->AHL20(2)   -----   gcttaatatgatatggactaattaaattgggcttgtggtggcctaatatggtcatgataatgaggaagaaattcaaatttactacatagtattggcttac  1185100                                                              <---------GLK1(2)                                                              <---------ARR11(3)                          <---------AHL20(2)                  --------->ARR11(3)             --------->AHL20(2)                 --------->GLK1(2)             <---------AHL20(2)                 --------->ARR11(3) ---------YAB1 --------->AHL20(2)            --------->AHL20(2)                                     - -ANAC58 --------->AHL20(2)    <----------DOF2  <---------ARR14(2)                  <---------AHL20(2) -ANAC58 <---------AHL20(2)  <---------YAB1  <---------AHL20(2)              --------->DAG2 --------- ---->ANAC55(2)<---------AHL20(2)       <---------YAB1    ---------->DOF2   ---------->DOF2----------   ttattgttgaattatatatatatatcaatttatctttgagttaatattaaaatctggacttaaagattttgttttaaaaaaagttttaaaatgaaaagtt  1185200                                                                      ----------------->AGL3                                                                      ----------------->AGL2                                                                      <---------MYB59                                                                     --------->ANAC46                                                                     --------->ANAC58                                                          --------->At5g28300                                                         ----------->GT1                                                  <---------------AGL15                  <---------TOE2(3)                                                  --------------->AGL15--------------->AGL15 ---------->GT1          <---------HSFB2a(2)     ----------------->AGL1<---------------AGL15 >DAG2    --------->AHL20(2)                     ======================================MADS_MADS >DOF2    <---------AHL20(2)   <---------ZAT6    ----------------->AG--------->ANAC58   ---------->DOF2   atcagttaaaatttaaatatagggattttggaagtgttcatttgtatgttttccaaaaactgtaaatccatacccaattgtagaaataactaaagtttac  1185300  Previous    Next  AGI:  At5g04270.1    Description:  zinc ion binding. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT3G09320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68911.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 1182719    to: 1184766    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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