Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <-----------GT1             <------NtERF2              <-------TEIL             --------->ANAC58                   ---------->DOF2            --------->ARR14(2)         --------->ANAC58                 --------->ANAC58            <            <---------ARR14(2)  --------->YAB1                          --------->ANAC58         <---            <---------GLK1(2) --------->MYB52(1)                   --------->YAB1<----------ID1------   aaactaggctctcagattcaccatcttcaaacaaacagaacaggcctcagacatgaacgatgaacaaaatcaaaacgaaagatgagacaagtgtgtttga  1158500                                                                                                  ---                                                                                                 <---                                                                                               ------                                                              <---------MYB52(1)              -------                                                --------->TOE1(2)                --------->MYB52(1)    <-----------GT1                   <---------------------WRI1        <---------YAB1       -------- ---------TOE2(3)              --------->WOX13(1)   --------->YAB1   --------->GLK1(2)     ------>ZmHOX2a(2) ------WOX13(1) ----------->HVH21<---------ATHB12 <---------TOE2(3) <---------GLK1(1)    --------->ARR11(3) --->ATHB12   <---------ANAC46<---------AHL20(2)--------->TOE2(2)   --------->GLK1(1)    <---------ARR11(3)   ttgatgttacctcttggtgtgaaggctgagaataaatcaagacgaagaaaccaaggatgagtccgatagggattccgattacaaaaccgatgatccccaa  1158600                                             <---------ARR11(3)                                             --------->GLK1(2)                                             --------->ARR11(3)                                         --------->YAB1                   <---------AHL20(2) ---->GAMYB                          --------->LBD16           --------->ANAC58    ---------->DOF2 ------ALFIN1                       --------->HSFB2a(2)       --------->DAG2  --------->AHL20(2) ----->RAV1(1)                      <---------HSFB2a(2)      ---------->DOF2  <---------AHL20(2) -->ANAC46                         <---------LBD16 ---------->DOF2        --------->AHL20(2)<-------- ->LBD16        <---------TOE2(2)<-----------GT1<----------DOF2--------->ANAC58---------->DOF2   cacactggtgaagaaacccatgtttttgttttgtttttcccgatgaaaatctttaaagaaaaaaaaagcaagagaattaataaaagaaagaacgagtcag  1158700                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)                                                                                     --------->GLK1(2)                                                                              --------->RAP2.6(2)                                                                              --------->DREB2C(2)                                                                              --------->DEAR3(1)                                                                              ------->GAMYB                --------->ANAC46              <---------DOF5.7(2)             --------->ANAC46                --------->ANAC58            --------->DOF5.7(2)              --------->DEAR3(2)          <------ZmHOX2a(1)                 --------->At5g28300              <---------MYB55(2)        <---------TOE2(3)                  ----------->GT1                   --------->MYB46(3)      --------->ICU4                ----------------->AGL1                   <------------AtMYB77    --------->YAB1   <------ZmHOX2a(1)  --------->MYB52(1)   <---------ZAT18------>MYB83 ----------->GT1--------->ANAC58   <-----------------AGL1    --------->ZAT18-------->P  <----------DOF2 ---HVH21----------->GT1     --------->GLK1(2)--------->MYB52(1)            ------>MYB46(1)   agtcagtaataaggaaacacgaaggagaaggaatcgggtccaaaacggtaacgaagaagagagagcccttctgtttccaaccgccaaaatctttttctat  1158800                                                                                    =================                                                                                    <---------ANAC46                                                                                    <---------TGA1a                                                                                    --------->O2                                                                                    --------->TGA1a                                                                                    <---------O2                                                                                   <------NtERF2                                                                                  <---------RAP2.6(3)                                                                                 --------->DEAR3(1)                                                                                --------->DEAR3(2)                                                                               <---------At4g35610                     <---------MYB46(3)                                        --------->At4g35610                     ----------->GT1                                        --------->LBD16                     <------MYB83                                      <---------GLK1(1)                  <---------MYB52(1)                                   --------->GLK1(1)                <---------YAB1                                        <---------ARR11(3)             <-----------GT1                                      <---------ANAC55(2)       ----------->GT1       <----------DOF2                      --------->ANAC55(2)        --------    ---------->DOF2  <------MYB46(1)                       --------->AHL20(2) *TSS------>NtERF2     <   gtgactaaaaggttttttccgattggttactcttttttttttttgcataagagaaacaaaaaaaaatcacgagatttccgaagccgacgtgaaaatggtt  1158900                              <---------ANAC46               --------->At4g35610                              <---------ANAC58               <---------ZAT2                           <---------WOX13(1)           <---------ICU4                          <---------ANAC58              --------->YAB1                     <---------ANAC46        <-------GAMYB   --------->ZAT2                     <---------ANAC58       --------->MYB52(2)                     <---------ANAC58       --------->MYB111(2)                 <---------ANAC58           <-----------RAV1(1)                           ---------->DOF2       <----------DOF2    <------------CBF  <---------MYB46(3)                  <---------ANAC46 <<<<<<<<<GATA-1 <---------ANAC58       <---------YAB1 --------->ICU4           <---------ANAC58  <-- =================bZIP_DOF<---------ANAC58  --------->MYB55(2)                  <---------ANAC58 <--- --->GT1   <---------AHL20(2) <---------ANAC58         <---------ATHB12      <----------DOF2     ---- -----------GT1<---------AHL20(2) <---------YAB1   <---------MYB59       <-----------GT1 --------->AHL20(2)   tttatctatctttttattttcttgtgtggattgcttgtgattttgtttgttggcctaataatcagcttggattttttagctttcttggaaataaaagaag  1159000            <-----------GT1            <---------AHL20(2)        --------->AHL20(2)        <---------AHL20(1)        --------->AHL20(1)                                                          <---------ANAC58        <---------AHL20(2)                                                          <---------ANAC58     <---------ICU4                                                     --------->ANAC55(1)   -------     <--------HAHB4                                                     --------->ANAC46     <-------    --------->ICU4                                                      --------->ANAC58   --------->YAB1    <---------YAB1                                              <---------AHL20(2)  <---------ANAC46 <---------YAB1                                           --------->MYB52(1)     <---------WOX13(1)<- ----ZmHOX2a(2)                                <---------YAB1   --------->AHL20(2) <---------MYB46(3) ------ARR11(3)                             <-----------------AGL3      --------->ANAC58----------->GT1 ----->ARR11(3)<----------DOF2       <-----------RAV1(1)<---------MYB52(2)     --------->ATHB12<-----   atcacgataattaattacttttatggtcccaactacaaattgttggactactattggaactaacaaataaatacacgaaattgattgggtgagttataat  1159100                                                                       <---------------AGL15                                                        --------->AHL20(2)                                                        --------->AHL20(1)                                                        <---------AHL20(2)                                                       <---------AHL20(2)     --------->YAB1                                                       --------->AHL20(2) <---------YAB1   <----------DOF2                                 <---------YAB1      --------------->AGL15        -  <---------DAG2                           --------->ARR14(2)          ============================== -->YAB1                     <---------AHL20(2)   --------->AHL20(2) <---------HSFC1(2)             < --YAB1                     --------->AHL20(2)----------->GT1        --------->HSFB2a(1)            < ----------GT1        <<<<<<<<<<WRKY63     <---------ARR14(2)        <---------HSFB2a(1)            - ----AHL20(2)       ----------->GT1        <---------GLK1(2)         --------->HSFC1(2)             -   attacctttttagtttttgatatagtcaaattttatagtataacagatttgttaaaattaaattgtatcgaaacttcttatagtaatgtactaatgtgag  1159200                --------->YAB1                                                           <---------ANAC58               <---------YAB1                                                            <---------ANAC46            <---------YAB1                          <---------------AGL15       <---------ANAC58          ----------->GT1                           --------------->AGL15     <-----------GT1          <---------ZAT6                            ------>ZmHOX2a(1)    --------->AHL20(1)      --------->ZAT14                           <-----------GT1          <---------AHL20(1)      <---------ZAT14                         <---------YAB1             --------->ARR11(3) -------->GLK1(2)              --------->AHL20(2)<---------YAB1       ------>MYB83<---------MYB52(1) ===================================================================MADS_MADS<-----------GT1 ---------ARR11(3)       --------->ANAC46   --------->YAB1            ------>MYB46(1)    <---------ANAC58 ---------ARR14(2)    --------->ZAT14 <----------DOF2               <---------MYB59<----------DOF2 -------->ARR14(2)    --------->ARR14(2)    <---------ICU4   --------->AHL20(2) <---------ANAC58 -------->ARR11(3)    <---------ARR14(2)   <---------YAB1---------->DOF2 <---------ARR11(3)   aaaatctgtgtactgttattatagtatacgcgttttaatacttttattattatcctacttaaagaaaataccaaatatttttccgttttttgggtgtgtt  1159300                                                    --------->AHL20(1)                    <---------DAG2                                                    --------->ARR11(3)                    <----------DOF2                                                    <---------ARR11(3)                 <-----------GT1                                                --------->YAB1                       <----------DOF2                                       <---------At4g35610                     <---------AHL20(2)   -                      --------->ARR11(3)       --------->AHL20(2)              <---------YAB1      <-             <-----------GT1           <-------GAMYB<---------AHL20(1)        <---------AHL20(2)   <-   <----------DOF2   <------ZmHOX2a(1)<-----------RAV1(1)                     --------->AHL20(2)   <-   tagttcttttttttttaactgaaggattttggtgaattttctgttgccattaaaaatatttgtgtttagttttttgatattttaattctttacttttttt  1159400  Previous    Next  AGI:  At5g04220.1    Description:  ATSYTC/NTMC2T1.3/NTMC2TYPE1.3/SYTC. similar to ATSYTA/NTMC2T1.1/NTMC2TYPE1.1/SYTA [Arabidopsis thaliana] (TAIR:AT2G20990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68934.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 1155866    to: 1158878    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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