Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ANAC46            <---------------AGL15         <---------ARR14(2)         --------->ARR14(2)      --------->ANAC55(2)      <---------ANAC46      <---------ANAC58      <---------ANAC55(1)      <---------ANAC55(2)       --------->ANAC58   --------->ALFIN1----------->GT1                                    <----------DOF2 <-----------RAV1(1)            --------->ANAC58         ---------->DOF2 ------YAB1 --------------->AGL15                     <---------HSFB2a(2)                      >>>>>> --->YAB1<---------ARR11(1)     --------->ANAC46      --------->HSFB2a(2)               --------->TOE2(3) ---YAB1<---------CCA1(2) --------->YAB1   <---------ETT(2)   --------->AHL20(1)        --------->TOE1(3) >YAB1<---------ANAC58   <---------ATHB12  --------->ETT(2)----------->GT1           <-----------GT1-   taactgtggcgtatccacaaaatgtaaatcatacaagtcactaagtcgacattcttctgtaaagtatattagcttttgaacaagaattaaccttgaaaac  1150500             <---------ICU4   <---------AHL20(2)                                              <---------AHL20(2)   --------->AHL20(2)                                              <---------AHL20(1)   --------->AHL20(1)                                         <---------AHL20(1)  --------->AHL20(2)                                          <---------AHL20(2)  <---------AHL20(2)                                    --------->TOE2(3)      <---------ATHB12 --------->AHL20(2)            <---------------AGL15  <-----------ARR10   <-----------GT1 <---------AHL20(1) <---------At4g35610           <---------ATHB12 --------->AHL20(2)        <------- >>>MYB2    <---------YAB1     --------------->AGL15 <---------CCA1(2)   <-----------GT1  <------ZmHOX2a(1) -------->YAB1    <---------HSFB2a(2)       ---------->ID1    --------->AHL20(2)--------->YAB1   caaaataatttgttatcatttcagaagctataactattttgagtttgttctaatcaaatcttattttattttatttttccaatcttacttaaggaccaaa  1150600                                                                               --------->AHL20(1)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                              --------->CCA1(1)                                                                              --------->RVE1(1)                                                                            ------>MYB83                                                --------->YAB1              ------>MYB46(1)                                      <----------DOF2                  <-----------GT1          -----                                     <---------ANAC58               ------>MYB83               ------                                     <---------ANAC58               ------>MYB46(1)        <---------TOE2(3) --MYB59                  ------>ZmHOX2a(1)    <-------TEIL       <---------MYB59      <----------DOF2   atttgaacttccaagtgatatactaatccttcaaaactggctttggacattcatagagagactatagaccaaatcaccaaatatcttggatttatggaaa  1150700                                                                                            ---------                                                                                            <--------                                                                                           --------->YAB1                                                                  --------->RAP2.6(3)    ------->TEIL                                                              <---------ICU4          <---------YAB1                                      ------>ZmHOX2a(1)       --------->YAB1 <---------ANAC58                                  <---------ARR11(3)         --------->ICU4  <---------ANAC46      ----------->GT1       --------->TOE2(3)                <---------YAB1  <---------ANAC58 ---->DAG2                --------->ARR11(3)           <---------MYB46(3)  --------->ARR11(3) ---->DOF2                <---------ARR11(3)      <---------YAB1<---------YAB1      --------->YAB1   agtatatgaagaaaaaccaaaaaccaaaaatctcaaaatcctaatccattctattatttgttgatgatgactgcaaatttcttgtatgatgaattttaat  1150800                                               --------->ARR11(3)                                               <---------ARR11(3)                                               --------->GLK1(2)              --------->ANAC46                --------->RVE1(1)         --------->PCF2                       --------->CCA1(1)       <------MYB46(1)              <---------YAB1                             <---------TOE2(3)       <---------ANAC58            <---------AHL20(2)                    <---------AHL20(2)       <------MYB83                --------->AHL20(2)                   --------->AHL20(2)       <---------ANAC58   <----------DOF2   --------->AHL20(2)  <---------TOE2(3)     --------->TOE2(3)      --------->MYB59    <---------DAG2----------->TBP          <---------TOE1(3)<------ZmHOX2a(1) >AHL20(2)   --------->LBD16   <---------------AGL15       <----------DOF2     <---------TOE1(3)<---- -AHL20(2)  <---------HSFB2a(2)--------------->AGL15    <------ZmHOX2a(1)--------->AHL20(2)  *TSS   ggaatagttgggttccacaaaatcaaaccttttctattaatataaaaaaaatctctaaggacttttaaggtttatttaattaaggaaacctatatagacc  1150900                                                               <---------MYB59                                                             <-------TEIL                                                           --------->LBD16                                                          <---------ANAC58                                                          <---------ANAC55(2)                                                          <---------ANAC46    --------->ZAT6                                                          <---------ANAC58  <-----------GT1                                                  <-----------GT1    --------->MYB52(1)      <-----------GT1                          --------->CCA1(2)   <------------MYB.PH3(2)  <---------AHL20(2)                          <---------ARR11(3)   <---------MYB59  --------->AHL20(1)     --------->YAB1       --------->ARR11(3)   <---------MYB52(2)  --------->AHL20(2)    --------->ICU4      <-------TEIL --------------->AtSPL8 -----MYB59  ---------->DOF2               <--------P    --------------->AtSPL3   --------->ZAT14   taaattttttacatgtaaagaatgtattgatgacatctaaacgaggtagatataactgttccgtacataactaacttataacacttctctcaagtctcga  1151000                                                                                               ------               ---------->DOF2               <---------MYB59                                   ------            --------->ANAC46              <---------ZAT14                    <---------------AGL15      <---------AHL20(2)                  --------->ZAT14                    --------->HSFB2a(2)      --------->AHL20(2)             <---------ZAT14                         <---------HSFB2a(2)    --------->AHL20(2)               <---------ZAT18                         --------------->AGL15    <---------AHL20(2)               --------->ZAT18                       -------->P     ---------->DOF2  --------->AHL20(2)                 --------->ZAT14             <-----------GT1      <----------ID1  <---------AHL20(2)       ----------------------->TaNAC69(2)<---------MYB52(1)   ---------->DOF2  --   gtatatatatatatacacaaagtgagagacttgagacagagcactgaactaacttgcaactctgttttttcaacttctaccagaaaaagagaaaaagaag  1151100                                               --------->ANAC46                                             ------>MYB83                                             ------>MYB46(1)               --------->GLK1(2)                                            --------->MYB55(1)            <---------GLK1(2)                                           <---------MYB59                <---------ARR11(3)  -------                                           --------->AtMYB61            <---------YAB1        -------   --------->ARR11(3)                      --------->MYB46(3)      --------->REM1(1)          -------   <---------GLK1(2)                     ------>NtERF2      <---------ARR11(3)           <------ZmHOX2a(2)   <---------ARR11(3)             <xxxxxxxxxxxxxxxxsmallRNA(s)------>ZmHOX2a(2)          ============ --->ANAC58               <-----------HVH21<---------MYB55(2) <---------ICU4        --------->GLK1(2) --->ANAC58      <------NtERF2  <---------ZAT14--------->ANAC58 ================================HOX2a_HOX2a -------->DOF2 <---------ANAC46 --------->ZAT14--------->ANAC58 ------>ZmHOX2a(1)  <---------GLK1(2)   caaaagatacttcaatggcgcaaactactgtcactgtagtcgcgaccaaacgcgatgctcttgatccttacatcaagattcttcagaatcgatcaaacga  1151200                                                                               <---------ARR11(3)                                                                               <---------ARR14(2)                                                                               --------->ARR11(3)                                                                               --------->ARR14(2)                                                                 <---------ARR11(3)                                                                 <---------ARR14(2)                                                   ---------->DOF2      <---------At4g35610 -->ANAC58            --------->TOE1(3)        ----------->RAV1(1)      --------->At4g35610         < -->ANAC46            --------->TOE2(3) ------->GAMYB            --------->ARR14(2)              <--- -->ANAC58------>ZmHOX2a(1)            --------->MYB46(3)        --------->ARR11(3)     --------->ZAT2 ================HOX2a_HOX2a           <---------MYB52(2)      ----------->ARR10        <---------ZAT2   catcgatgtctccttctcttcttacctcaaaccagacaacaacgaacaacaacaaaaggagaatgaagatactgagctaagtatcttcgaagctcgaagt  1151300                                                                           --------->At4g35610                                                                           <---------At4g35610                     --------->YAB1                                       --------->ARR14(2)                  --------->MYB52(1)                       <---------ARR11(3)           --------->ANAC58                                --------->ARR14(2)           --------->ANAC58                                --------->ARR11(3)                       -         --------->MYB52(1)                --------->GLK1(2)              <---------ARR14(2)      <--        <---------ARR14(2)               <------ZmHOX2a(1) <---------GLK1(2)                      <--        --------->ARR14(2)       <-----------RAV1(2)       --------->ARR14(3)     --------->DAG2  <-- ----------DOF2--------->ANAC58 ----------------->AGL1     <---------ARR14(3)    ---------->DOF2<---- --------GT1   --------->ANAC58------>NtERF2      --------->ALFIN1   <-----------HVH21      <--------   tactttagcgaaaacggaagcaacgatagtcgatgccagacgaggaatctaagtggtccaagattttcttcggtcgcatctgcaaaagtgtcttctttta  1151400  Previous    Next  AGI:  At5g04190.1    Description:  PKS4 (PHYTOCHROME KINASE SUBSTRATE 4). similar to phytochrome kinase substrate 1-like protein, , putative [Medicago truncatula] (GB:ABD28653.2) Range:  from: 1150893    to: 1152482    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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