Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   -ARR14(2) >ARR14(2)                           --------->ANAC46 -ARR11(3)                          <---------LBD16 >ARR11(3)                      --------->ARR14(2) ---ARR10            --------->TOE2(3) >ARR14(3)           --------->TOE1(3)                                            --------->GLK1(2) -ARR14(3)     --------->ANAC46 <---------ARR14(2)               ----------->GT1 <---------GLK1(2)   ccctgcatcgtcttcccacttaaccttcatgtcgaatccacggttcttaagaatagcctctacaggtttgtaatatgtctgaagaatctctgtagaattg  1148900                                                               <-----------GT1                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                        --------->LBD16                                                       --------->ANAC46                                                       --------->ANAC58                               <---------WOX13(1)      --------->ANAC58             <---------YAB1  --------->ATHB12   <---------ANAC58          <-----------------AGL2     <-------GAMYB <-----------HVH21                                -          <-----------------AGL3    <---------MYB46(3)<---------LBD16                             ---      <---------ANAC58     <---------WOX13(1)   <---------ANAC58                                  <--      <---------ANAC58  <---------YAB1          ----------->RAV1(2)                          <-------   tgaacaatgcgagctatttttggagtaagattgattggcgattgcctcttccctgtcccgcaaattttccattcagccttgatactgctccatttcgagg  1149000             --------->LBD16           <---------LBD16                                 <------ZmHOX2a(1)    --------->GLK1(1)                                   <-----------RAV1(2) ----->ZmHOX2a(2)                                       <---------LBD16                             - ------>ARR14(2)                                     --------->RVE1(1)                              < -------ARR14(2)                            <---------At4g35610                                  ---- --LBD16----------->HVH21                   --------->At4g35610                              <-------   gatcggctatctcaccgggtttgtaatgaaattcagtctctgtctcatctgcaaaatatcaggagaacaagagtcaaaatacttctcagagttttgcatc  1149100              <---------ANAC58              <---------ANAC55(2)              --------->ANAC55(2)     --------->YAB1                                                         <---------LBD16    <---------ATHB12                                                       <---------At5g28300 <---------AHL20(2)                                                   --------->ARR11(3) -------->AHL20(2)                                          --------->At5g28300 ---------AHL20(2)      --------->TOE2(3)        --------->ANAC55(2)  <---------ARR11(3) ----->WOX13(1)       <---------ATHB12          <---------TOE2(3)   <---------TOE2(3)          ------ --AtLEC2     <---------ANAC58             --------->ATHB12----------->GT1<-----------GT1   >>>>>>>>>TBF1   aattaaatcatacattacgttccaaacattaagacgactattgcatcatttatgtaatggactgtgaattgagattttaccggctagagatgaagaagaa  1149200                                                                                        ---------->ID1                                                               <<<<<<<<<TBF1         *TSS                                                         <<<<<<<<<TBF1               <---------DAG2                 --------->DAG2                  <------------------------ANAC81     <----------DOF2        ----------->GT1                      <-----------GT1<<<<<<<<<TBF1           <---------DAG2   --------->ANAC58 <------ZmHOX2a(1)       <------------------------ANAC81      <-----------GT1   --------->ANAC58 --------->YAB1       <------------------------ANAC81 --------->GLK1(2) ---->DOF2      ---------->DOF2     <----------DOF2  <-----------GT1    <---------GLK1(2)  <---------MYB52(1)   agagcaagaaatgttacaaaaaggataatggttttcatcttttgttttttcttattttcttcttcttcttctcagaatgtgttttaccttttcgttttgt  1149300                                                                <---------TOE2(3)                                                                <---------TOE1(3)                                                        <---------AHL20(2)                            <---------ARR14(2)          --------->AHL20(1)                            --------->ARR14(2)          <---------AHL20(1)                 --------->At4g35610                       --------->ANAC58                 --------->AHL20(2)                 <---------At4g35610                       --------->ANAC58                --------->AHL20(2)                  <---------ZAT2                   <---------REM1(1)               ------------>CBF               <---------YAB1                  <---------TOE2(3)  <------ZmHOX2a(1) <---------ATHB12        <---------YAB1   gatgtcttaaatagaagattaatgtaggcaaatttgggaggatgtctaaaaacttcaataaattctaaggttgaaatttttgttattaaactcagcttct  1149400                                        ----------->ARR10                                 <---------AtLEC2                            <---------ARR11(3)                                       <-----------GT1      <---------ANAC55(2)   --------->ARR11(3)                                   <--------HAHB4      --------->ANAC55(2)   <---------GLK1(2)                                   <---------YAB1 <---------YAB1           ----------->ARR10                     ------>ZmHOX2a(1)--------->YAB1   attttgatatgtgatagtctatctaagaaagattttcatggttagattgggttacgactctatttcctctgtgaataggcctattattaagcatatgagg  1149500                                                          <-----------GT1                                                     <---------RVE1(1)                                                    <---------GLK1(2)                           -----                                                    <---------ARR11(3)  <----------ID1      <--------                                                    --------->ARR11(3)  ----------->GT1     ---------   <---------AHL20(2)                             ----------->ARR10 ---------->DOF2      <----------DOF2   tctaatttaagtcaaacttgcagtccatttttaaaaagttttgagtttggattagattttttacttagtctaaagagaaaaaaacaattctcttttagaa  1149600                  <---------HSFC1(1)                                                       --------->YAB1        --------->YAB1                                                                     --------->TOE2(3)   --------->AHL20(2)<---------GLK1(2)                                            --------->MYB46(3) <----------DOF2  <---------HSFB2a(2)                                             <---------MYB52(2) --------------->AGL15                                                         <---------WRKY12<----- <---------------AGL15            <---------ATERF1(1)                          <---------WRKY38(1) ----->DOF2       >>>>>>>ZML2--------->ALFIN1       --------->GLK1(2)  <----------DOF2    <---------YAB1 -HSFB2a(2)       --------->HSFC1(1)     ------>MYB83  <----------DOF2 <---------DAG2------->TEIL >HSFB2a(2)       --------->HSFB2a(2)    ------>MYB46(1)            <-----------GT1------->GAMYB   aagctttaaatagtaatgttctagaatttgggagggggacaccaacttatggacaatctttgagtttatatcacttttttgtcaacgaacttatgttaat  1149700                                                                                               ------                                                                            <---------YAB1    <------                                                                        --------->YAB1        -------                                --------->TOE1(3)                 <---------ARR11(1)         <-------                               --------->ZAT6                    <---------CCA1(2)   <---------WOX13(1) ----YAB1       --------->AHL20(2)                        --------->ATERF1(1)     <---------YAB1   atagggtatgtatacacattatatatacctataaccctagaagactgcaaacacagagtaggctcccaaatctataatatgagtgtgatagactaataaa  1149800  Previous    Next  AGI:  At5g04180.1    Description:  carbonic anhydrase family protein. similar to carbonic anhydrase family protein [Arabidopsis thaliana] (TAIR:AT4G20990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21870.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148) Range:  from: 1147649    to: 1149285    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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