Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->At4g35610     ----------->GT1                  ------>ZmHOX2a(2)    --------->ANAC58         <------ZmHOX2a(1)        ----------->HVH21 --------->ANAC46  <----------DOF2 -P      ================HOX2a_HOX2a   --------->ANAC58  ---------->DOF2<---------AtMYB61 <---------HSFB2a(2)   tagagttgataggacattgatccgatgaatgaacaagggacacgaagagtataaacacaagaagcgataatgctttggtcgtagacattgttagagaagt  1075300               <------MYB83               <---------MYB46(3)               <------MYB46(1)            <-------GAMYB---------->DOF2           <---------ANAC58           <-----------RAV1(1)                     <---------ANAC58           --------->MYB52(2)                   ---------->ID1           <---------MYB46(3)                 <-----------RAV1(1)            --------->YAB1           --------->MYB55(2)              --------->GLK1(2)     <-----------TBP --------->GLK1(2)           --------->MYB111(2)    <------ZmHOX2a(1)<---------ANAC46         <-------TEIL   ------>ZmHOX2a(1)   ttgagagatttgtttgttggttttagacaaagagaaggatgagagaatttgttgcctatgtgtgtgtatatatagagtttcataatctagctcctagtta  1075400                               <---------ICU4                               -------->HAHB4                               -------->ATHB1                               --------->ATHB51                               --------->ATHB12                               <---------AHL20(2)                              <---------YAB1                              --------->ICU4                              <---------ATHB51                            <--------HAHB4                            --------->ATHB51                            <--------ATHB1                            --------->YAB1                            -------->HAHB4                            <---------ICU4                           --------->AHL20(2)                           <---------ATHB51                           --------->ICU4                           <---------YAB1                                 <---------AGP1                         --------->YAB1                                   --------->AGP1                        <---------ATHB51                                  --------->ARR11(3)                        <---------ATHB12                                  <---------ARR11(3)                    ------------>CBF                                      --------->ARR14(2)                <---------ARR11(3)                       --------->ARR11(3)                --------->ARR11(3)          --------->AHL20(2)            <---------ARR14(2)                --------->AHL20(1)      ----------->GT1  --------->AHL20(1) ------>ZmHOX2a(2)               --------->CCA1(2)        <---------ZAT6   <---------ARR11(3)<------ZmHOX2a(2)       <-              <---------ARR11(3)   --------->YAB1        <---------AHL20(1)--------->CCA1(2)      <--              --------->ARR11(3)<------------CBF      >>>>>>>>>>GT-3b    <---------GLK1(1)   <-------   gtctgtgatttagatagatatattcaataataattattgatagtgataaattcaagaaaaatatttgatagaacgagatctgagaaaatatgtcagaatt  1075500                                                                                               <-----                  --------->AHL20(2)                                                        ---------                  <---------AHL20(2)                                                        <--------                <---------YAB1--------->AHL20(2)                                         <----------DOF2             <---------AHL20(2)   <---------AHL20(2)                                   --------------        <---------AHL20(2)   <---------YAB1              --------->ANAC58         --------->KAN4(2)   <---------AHL20(1)     --------->ICU4                 --------->ANAC58        <---------HSFC1(2)   --------->AHL20(2)     <---------YAB1 <---------AHL20(2)                      --------->HSFC1(2)   <---------AHL20(2)    --------->TOE2(3)               --------->AtLEC2        --------->HSFB2a(1) --------AHL20(2)--------->AHL20(2)     --------->AHL20(2)                       <---------HSFB2a(1) -------YAB1 <---------YAB1<---------ICU4--------->AHL20(2)                  ----------->GT1<-------- --GLK1(2)   --------->AHL20(2)  --------->AHL20(2)  --------->GLK1(2)     ------->TEIL------>ZmHOX2a(1)   tttattttattttatattattaaaaaacattattatttaatatttaatcaactagaatcaggcaaaacgaggcaacgtatcgaaaattcctctttttatt  1075600      <---------AHL20(1)      --------->AHL20(1)                                           --------->At4g35610      --------->ARR11(3)                                   <---------AHL20(2) ------------>CBF                --------->ICU4       <---------DAG2 ----YAB1                     --------->AHL20(2)      <----------DOF2 *TSS                      ----- >AHL20(2)                    <---------AHL20(2)   <-----------GT1 ----------->RAV1(2)         ------ -AHL20(2)             --------->DAG2            <----------DOF2   <---------At4g35610        ------- ->AGL15              ---------->DOF2 <---------AHL20(2)  <---------AHL20(2)          <---------TOE2(3) -YAB1<---------ARR11(3) ----------->GT1     <----------DOF2     <-----------GT1      <---------YAB1   aatatcaatattttgcctaaaacaaaaaggaaataaatattaaaacgctttctttacttttttattttcacctgaaaaattcgaaattaagaatgaaaaa  1075700                                   --------->HSFB2a(2)                                   <---------HSFC1(1)                                   <---------HSFB2a(2)                                   --------->HSFC1(1)                              --------->HSFC1(2)  <----------ID1              <---------HSFB2a(1)  --------->ANAC58        ----------->GT1                                                          <-  --------->ANAC58      --------->DAG2     --------->GLK1(1)                                      --- ------------------->ANAC81   <---------HSFC1(2)                       --------->ANAC46           <-- --->DAG2              ---------->DOF2     <---------GLK1(1)    <-----------GT1  <---------YAB1   <-- --->DOF2    ---------->DOF2  --------->HSFB2a(1)       <----------DOF2<---------At4g35610     <-----   ggaaacgacaaaaaaaaaagaatgaaaaaggaaatttctagagagaaatctctgtgttctttgatttttcttcacctcatcttcttataaatcatctgtt  1075800                                                                                              -------                                                                                             ------>ZmHOX2a(1)                                                                                            ---------                                                                                            <--------                                                                                           ----------                                                                                           <---------         --------->At4g35610                                                               ----------         --------->ZAT18                        --------->ANAC46                           <--------- ------GAMYB                 <---------DAG2<---------ARR11(3)                              <--------- ------>MYB52(2)          ------->GAMYB    --------->ARR11(3)                         --------->ARR11(3) -------ANAC58           <---------MYB111(2)<---------YAB1                          <---------AHL20(2) -------ANAC58           --------->MYB46(3)<-----------ARR10                       --------->AHL20(2) ----MYB52(1)  ---------->DOF2        <---------YAB1                 <---------TOE2(3)<---------ARR11(3)   tcgttgcagagagctctaaaagaaacaacaacctttctctctgattatcttcgccatttctcgtcgaaattagggattttgttcattaaatcttcctgat  1075900     <---------CCA1(1)     <---------RVE1(1)                                                                              -    <---------ARR11(3)                                                                              -    --------->ARR11(3)                             <---------ICU4                                  <-   <------MYB83                                   --------->ICU4                                 <---   ----------->GT1                          <---------MYB46(3)                                   <---   <------MYB46(1)                          <---------DEAR3(2)                                   ---- -->ATHB12<---------YAB1                   <---------DREB2C(2)                                   <--- ------>AGL15                              <---------DEAR3(1)                                    ---- -------AGL15                              --------->ETT(1)                                     ----- ------->AGL2                             ---------->ID1                                        <---- --------AGL1                           <-----------RAV1(1)                                ------->GAMYB ------->AGL1                       <---------ATHB12      --------->ATHB12              ----------->RAV1(1) --------AG                --------->AHL20(2)  <-------TEIL                    --------->LBD16  <---- --------AGL2      --------->At4g35610<----------DOF2<---------YAB1<----------ID1      --------->MYB46(3)   ttggaaggtattttcattgtctgcttgaaaaaaattcaatctttgtcggttcattatgagtaattggagaagacaaaaacccagaaacaacaacagcaat  1076000                                           --------->ANAC46                                           --------->ANAC58         <---------WRKY12              <---------YAB1         <---------WRKY38(1)         <---------ICU4         <---------WRKY45            --------->YAB1        --------->DOF5.7(2)         <---------YAB1       <-----------HVH21          <---------ICU4 ------->HAHB4                    --------->YAB1 -------->YAB1                   --------->ICU4 --------YAB1               --------->ANAC55(2) -----HAHB4                 --------->ANAC46 ------ICU4                 <---------ANAC55(2)                            ------>ZmHOX2a(1) ----->YAB1                 --------->ANAC58   ------>NtERF2      --------->ZAT14 -----ATHB1                 --------->ANAC58  <---------ALFIN1====================HOX2a_HOX2a   <---- ----->ATHB51             <---------TGA2(2)--------->ANAC58   ------>ZmHOX2a(2)              -------- ---->ICU4<---------DOF5.7(2)  --------->WOX13(1)            <---------GLK1(1)            <----------DOF2 -----ATHB51             ----------->TGA1---------->DOF2    --------->ARR11(3)         <-----------GT1 -----ATHB12      --------->SPL7 <---------ATHB12           <---------ARR11(3)   <---------MYB52(1)   aattatagtcgtcaacgagggacgacgatgacgcaatcatcatcaaagccacctcttggtatgatctctgttctctcctctctgttttttttctttctta  1076100                                    <---------ANAC58                             <-----------GT1                        <---------ANAC46                        <---------ANAC55(2)                        <---------YAB1   <---------ANAC58              --------->ATHB12                      --------->YAB1<---------ANAC58                  <---------YAB1                     <---------ATHB12    <---------ANAC46<---------ANAC58 -----AHL20(2)       <---------ATHB51    <---------ANAC58<---------ANAC58             <----------DOF2 ->TOE2(3)    <---------MYB46(3)<---------DAG2           <---------ANAC46           ------>ZmHOX2a(1)   aatttgtgattttgagttgttcaattatgtataacctttcgtcgcttgcaaatcgagttccttgatgtgtttctcattgggttttcctcttttgtgttct  1076200  Previous    Next  AGI:  At5g03980.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28580.1); similar to lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28590.1); similar to GDSL-like Lipase/Acylhydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93963.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 1074204    to: 1075288    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g03990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G51940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64891.1) Range:  from: 1075670    to: 1077548    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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