Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ALFIN1                                              ------->PIF5                                              ------->MYC4                                              <-------MYC4                                              ------->MYC2                                              <-------MYC2                                              ------->MYC3                                              <-------MYC3                                              <-------PIF5                                             <---------TGA1a                     <---------ANAC46                                             <---------O2                        <---------AtLEC2     ---------->DOF2                         <---------ANAC55(2)                <-------TEIL     ==================================================bZIP_DOF              <---------ZAT2  --------->AtLEC2                           --------->O2                    <---------At4g35610 --->MYB83                                   --------->TGA1a                 --------->At4g35610 --->MYB46(1)                           ----------->HVH21               --------->ANAC58 ----->ORA47(1)                        <-----------HVH21                --------->AtLEC2            < ---->DEAR3(1)                         --------->LBD16                  --------->ANAC58           <- ---->DREB2C(2)                       <---------ANAC58                  ------>MYB46(1)            <- ---->DEAR4(1)              --------->LBD16  <---------ANAC46           ------>MYB83               -- -----MYB55(2)         --------->WOX13(1)<-----------HVH21              --------->ANAC46       <----- ---->MYB46(3)      --------->ANAC58  <---------O2        ----------->HVH21  --------->ZAT2    ------ -----MYB46(2)      --------->ANAC58  --------->O2      --------->At4g35610 --------->ANAC58 <------- --->DEAR3(2)       --------->ANAC46  <---------ANAC58  <---------At4g35610 --------->ANAC58<------ZmHOX2a(1)   gaccatgaaaagagagtgcttcaagcaatccgaagaagagccgtgacacgtggaacgtagatgacccttgaaccaagcaagctgcatggagagaggagtg  1074900            --------->ALFIN1           ------->MYC3           <-------MYC3        <---------ARR14(2)        --------->ARR14(2)       <------NtERF2      --------->LBD16      <---------RAP2.6(3)     --------->LBD16                                                --------->LBD16     <---------HSFB2a(2)                                   --------->LBD16     <---------ATERF1(2)                                  --------->HSFB2a(2)                     <--     --------->ETT(1)                                    <---------LBD16                          <--     --------->HSFB2a(2)                              <---------ANAC58                         <-----    <---------LBD16                                   <---------ANAC58                         <-----    ----------------->AGL1                        <---------ANAC46<---------------------WRI1  <------    <---------ANAC46                            <---------ZAT14<---------HSFC1(2)           --------- -------GAMYB                                   --------->ZAT18<---------HSFB2a(1)         <--------- --------MYB46(3)                            <---------ANAC58  --------->HSFC1(2)          ---------- ----------RAV1(1)<---------GLK1(1)          <---------ANAC46<---------ARR14(2)            <--------- ------->MYB52(2) --------->GLK1(1)          <---------ANAC58--------->ARR14(2)        <---------ANAC58 ----ZAT6  <-------MYC2                   <---------MYB52(1) <---------GLK1(2)         <---------ANAC58 --->ALFIN1------->MYC2 <---------LBD16 <---------MYB46(3)<---------HSFB2a(2)---------->DOF2<-------- --ANAC46 <---------ANAC46       ---------->DOF2--------->ZAT14--------->HSFB2a(1)  <---------MYB52(1)   tttgttgccggaacgtggagatttctctcggagaagaaagagctgttgagtgctgtgcttccggaaactccgaagttaacaaagacgttgtgttcccgtt  1075000  --------->MYB52(1)                                                               <------MYB83 -------TOE1(3)                                                                 <---------ANAC58 -------TOE2(3)                                      --------->At4g35610        <---------ANAC46 ----MYB52(1)                         --------->ANAC58       <---------MYB52(1) <---------ANAC58 -----CDC5                            --------->ANAC58      <-------GAMYB      <------NtERF2 -GAMYB                        <---------ANAC58 <--------HAHB4                <---------MYB46(3) ------>AGL15         <---------REM1(1)         --------->ATHB12              ------>NtERF2       <-- --------AGL1       <---------At4g35610         <---------ICU4              <---------MYB52(1)   ---- ------->AGL1       --------->At4g35610         --------->YAB1          --------->MYB52(1)       ---- --------AG <------ZmHOX2a(1)  <---------ANAC46<------ZmHOX2a(2)      ----------->HVH21      <------- -------AGL15  --------->ALFIN1<---------ANAC58<---------ATHB12   --------->CCA1(2)<------MYB46(1)<--   gaggtaagggtttaggagtgggagatgaagcctgcgtgccaagtaatcgatcattagcagtccgttagatagacgaccggtggcttggtgaaagtatgtt  1075100                              ------>ZmHOX2a(2)                             --------->CCA1(2)                             <------ZmHOX2a(2)                            --------->ARR11(3)                            --------->GLK1(2)                            <---------ARR14(3)                            --------->AGP1                            <---------AGP1                            <---------ARR11(3)                            <---------ARR14(2)                            --------->ARR14(2)                            --------->ARR14(3)                            <-----------ARR10                   ====================================MYC_MYB                   <---------ANAC58                   --------->TGA1a                   <---------ANAC58                 --------->LBD16                   --------->O2                    <---------ANAC58                   <---------O2                    --------->ANAC55(2)           --------->ATERF1(1)                   <---------ANAC46                <---------ANAC58     <------NtERF2      ----------->GT1     ----------->ARR10        <---------ANAC46   --------->ETT(1)  <---------SPL7   <---------TGA1a                <---------LBD16     <---------ANAC46 ---------GT1     <------NtERF2                 <---------MYB52(1)  <-----------HVH21 ------->HVH21  <---------RAP2.6(2)            <-------GAMYB       --------->ALFIN1 ----->WRKY12  --------->At4g35610            <---------MYB46(3)   <-----------RAV1(1) --YAB1       --------->MYB52(1)      ----------->RAV1(1)      ----------------->AGL1        <------- -------WRKY18(1)<---------RAP2.3(1) ----------->HVH21    <---------TOE2(3)     <-----------HVH21   tgaccgtatggataattagcggcgtgagaagatctggctccaacagggccgttgcggattaagtttccagtgtcggagatggagtcaccgaattggtaga  1075200                    --------->At4g35610     ----------->GT1                  ------>ZmHOX2a(2)    --------->ANAC58         <------ZmHOX2a(1)        ----------->HVH21 --------->ANAC46  <----------DOF2 -P      ================HOX2a_HOX2a   --------->ANAC58  ---------->DOF2<---------AtMYB61 <---------HSFB2a(2)   tagagttgataggacattgatccgatgaatgaacaagggacacgaagagtataaacacaagaagcgataatgctttggtcgtagacattgttagagaagt  1075300               <---------MYB46(3)               <------MYB83               <------MYB46(1)            <-------GAMYB---------->DOF2           <---------ANAC58           <---------MYB46(3)                      <---------ANAC46           --------->MYB52(2)                   ---------->ID1           --------->MYB111(2)                <-----------RAV1(1)            --------->YAB1           <-----------RAV1(1)             --------->GLK1(2)     <-----------TBP --------->GLK1(2)           --------->MYB55(2)     <------ZmHOX2a(1)<---------ANAC58         <-------TEIL   ------>ZmHOX2a(1)   ttgagagatttgtttgttggttttagacaaagagaaggatgagagaatttgttgcctatgtgtgtgtatatatagagtttcataatctagctcctagtta  1075400                               -------->ATHB1                               --------->ATHB12                               <---------ICU4                               --------->ATHB51                               -------->HAHB4                               <---------AHL20(2)                              --------->ICU4                              <---------ATHB51                              <---------YAB1                            -------->HAHB4                            <--------ATHB1                            --------->YAB1                            <--------HAHB4                            --------->ATHB51                            <---------ICU4                           --------->ICU4                           --------->AHL20(2)                           <---------YAB1                           <---------ATHB51                               --------->AGP1                         --------->YAB1                                   <---------ARR14(2)                        <---------ATHB12                                  <---------AGP1                        <---------ATHB51                                  --------->ARR14(2)                    ------------>CBF                                      <---------ARR11(3)                --------->AHL20(1)                       --------->ARR11(3)                <---------ARR11(3)          --------->AHL20(2)            --------->ARR11(3)                --------->ARR11(3)      ----------->GT1  --------->AHL20(1) ------>ZmHOX2a(2)               --------->CCA1(2)        <---------ZAT6   <---------AHL20(1)<------ZmHOX2a(2)       <-              <---------ARR11(3)   --------->YAB1        <---------ARR11(3)--------->CCA1(2)      <--              --------->ARR11(3)<------------CBF      >>>>>>>>>>GT-3b    <---------GLK1(1)   <-------   gtctgtgatttagatagatatattcaataataattattgatagtgataaattcaagaaaaatatttgatagaacgagatctgagaaaatatgtcagaatt  1075500                                                                                               <-----                  <---------AHL20(2)                                                        <--------                  --------->AHL20(2)                                                        ---------                <---------YAB1--------->AHL20(2)                                         <----------DOF2             <---------YAB1  <---------YAB1                                            --------------        <---------AHL20(2) <---------ICU4                --------->ANAC58         --------->KAN4(2)   <---------AHL20(2)     --------->ICU4 --------->AHL20(2)                      <---------HSFB2a(1)   <---------AHL20(1)     <---------YAB1 <---------AHL20(2)                      --------->HSFC1(2)   --------->AHL20(2)    --------->TOE2(3)               --------->ANAC58        --------->HSFB2a(1) --------AHL20(2)--------->AHL20(2)     --------->AHL20(2)                       <---------HSFC1(2) -------YAB1 --------->AHL20(2)   <---------AHL20(2)     --------->AtLEC2    ----------->GT1<-------- --GLK1(2)   <---------AHL20(2)  --------->AHL20(2)  --------->GLK1(2)     ------->TEIL------>ZmHOX2a(1)   tttattttattttatattattaaaaaacattattatttaatatttaatcaactagaatcaggcaaaacgaggcaacgtatcgaaaattcctctttttatt  1075600      <---------AHL20(1)      <---------ARR11(3)                                           ----------->RAV1(2)      --------->ARR11(3)                                   <---------AHL20(2) ------------>CBF                --------->ICU4       <---------DAG2 ----YAB1                     <---------AHL20(2)      <----------DOF2 *TSS                      ----- -AHL20(2)                    --------->AHL20(2)   <-----------GT1 <---------At4g35610         ------ >AHL20(2)             --------->DAG2            <----------DOF2   --------->At4g35610        ------- ->AGL15              ---------->DOF2 <---------AHL20(2)  <---------AHL20(2)          <---------TOE2(3) -YAB1--------->AHL20(1) ----------->GT1     <----------DOF2     <-----------GT1      <---------YAB1   aatatcaatattttgcctaaaacaaaaaggaaataaatattaaaacgctttctttacttttttattttcacctgaaaaattcgaaattaagaatgaaaaa  1075700                                   <---------HSFB2a(2)                                   --------->HSFB2a(2)                                   <---------HSFC1(1)                                   --------->HSFC1(1)                              --------->HSFC1(2)  --------->ANAC58            --------->HSFB2a(1)  --------->ANAC58        ----------->GT1                                                          <-  <----------ID1        --------->DAG2     --------->GLK1(1)                                      --- ------------------->ANAC81   <---------HSFB2a(1)                      --------->ANAC46           <-- --->DAG2              ---------->DOF2     <---------GLK1(1)    <-----------GT1  <---------YAB1   <-- --->DOF2    ---------->DOF2  <---------HSFC1(2)        <----------DOF2<---------At4g35610     <-----   ggaaacgacaaaaaaaaaagaatgaaaaaggaaatttctagagagaaatctctgtgttctttgatttttcttcacctcatcttcttataaatcatctgtt  1075800  Previous    Next  AGI:  At5g03980.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28580.1); similar to lipase, putative [Arabidopsis thaliana] (TAIR:AT1G28590.1); similar to GDSL-like Lipase/Acylhydrolase family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93963.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 1074204    to: 1075288    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g03990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G51940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64891.1) Range:  from: 1075670    to: 1077548    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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