Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <--------HAHB4                                <-----                                       ---------->DOF2                               <---------ZAT14         --------->ANAC46          --------->TOE2(3)       <-------TEIL              --------->ZAT14         --------->ANAC58         --------->ANAC46 <---------YAB1                    --------->REM1(2)         --------->ANAC58    <----------DOF2     <---------ICU4                     --------->ALFIN1    <-----------GT1         <---------ANAC58     --------->YAB1              --------->YAB1---------- ----------DOF2             <---------ANAC58   --------->GLK1(2)  --------->YAB1  <---------ANAC46   gccttttaaacacccatctcaatctccttggcttctacgtaaaaagaagaatcattttagattcagaaacataaacaattcatagtgtgtagagaaagaa  1069600                                                             --------->ANAC58                                                             --------->ANAC46                                                             --------->ANAC58                                                          --------->MYB46(3)                                                        ------>MYB46(1)                                                        ------>MYB83                                                      ------->GAMYB                                                      <---------MYB59                                                     --------->MYB46(3)                               <---------At4g35610  ------>MYB46(1)                          <------NtERF2             -------->P<---------ALFIN1                     --                   <----------DOF2                  ------>MYB83 --------->AtMYB61            -------                  <---------ANAC58               --------->MYB46(3)                         XXXXXXXXX -----ID1         <---------ANAC58        <----------DOF2--------->SPL7  --------->ANAC46<---------ZAT14 >DOF2     <---------At4g35610 --------->At4g35610 --------->MYB52(1)------>ZmHOX2a(1) <---------GLK1(1)   acaaaaccttctctgctcttgctttggcctcgcagatgaatagtcttttcatccaaccgaaccacgacctcctcttcgccattagatggagttctctggt  1069700                                                                           ----------------->AGL1                                                                           ----------------->AGL3                                                                           ----------------->AG                                                                           <-----------------AG                                                                           ----------------->AGL2              ------>ZmHOX2a(1)                                       <------ZmHOX2a(2)          --------->ARR14(2)                                         <---------ARR11(3)          <---------ARR14(2)                                     ---------->DOF2        ----------->ARR10                                       --------->AHL20(2)       --------->AHL20(2)                                  <------ZmHOX2a(2)    ----------->GT1                                       --------->ARR11(3)    --------->YAB1                                        <---------ARR11(3)       ----------->GT1   <---------ATHB12                                       --------->ARR14(2)--------------->AGL15 <-- ------->MYB46(3)              --------->ANAC58           <---------ARR14(2)<---------------AGL15 --- ---->GT1 --------->ARR11(3)   --------->ANAC58    ---------->DOF2   --------->ARR11(3)           --- XXXXXXXXXXXXXX>MIR829.1  >>>>>>>>>>WRKY26--------->MYB46(3)<-------TEIL   <-----------------AGL1 <--   aacaaatgataaaatcctcttattaagttgatcaagaaaacagaacaaacatctaaagaagatccattaaagatcgaaccaaaataggtatatatccaca  1069800                                                                   ----------->GT1                                                                   <---------REM1(1)                                                                   <---------bZIP60(1)                                                                   --------->TGA2(1)                                                                   --------->bZIP60(1)              <---------YAB1                                  --------->YAB1              <------ZmHOX2a(2)                              <---------AHL20(2)             --------->ARR11(3)                             --------->AHL20(2)             <---------ARR11(3)   --------->AHL20(2)  --------->MYB52(1) -------GLK1(2)--------->ATHB12   <---------AHL20(2) --------->TOE1(2) ------>ARR14(2)               <---------AHL20(1)   --------->MYB46(3) ------>ARR11(3)               --------->AHL20(1)   <---------MYB52(2)<-----------GT1 -------ARR14(2)               <---------ARR11(3)<----------ID1 --------->ICU4   gattttgtgtttcaagatcattagactcatcaatatataaatcacatcaatagaacaaacgatataatgatgtaacaacacattagtgtctaataggtat  1069900                                                                             *TSS               --------->TOE1(2)                                        <-------TEIL               --------->TOE2(2)             --------->GLK1(2)  --------->ALFIN1          <----------DOF2             --------->YAB1          <-----------RAV1(1)          <---------DAG2             --------->ICU4           <---------bZIP60(2)       <-----------GT1               <---------ATHB12         <---------ANAC46   <-----------ARR10               ------>MYB46(1)           <-----------------------TaNAC69(2)    --   --------->GLK1(2)               ------>MYB83   <------ZmHOX2a(1)    --------->GLK1(2)    ---------  <---------GLK1(2)   --------->MYB46(3)<---------YAB1---------->DOF2 <---------ARR14(2) --------->CCA1(2)   ggaagaatcttactttacctatgaacgaacacaaaccaaatgatgagaatcaggaagaaagatgatgtgggagattcagacacttgtgaagagatgattt  1070000                          ------>ZmHOX2a(1)                        ------>ZmHOX2a(2)                      <---------ARR14(2)                      --------->ARR11(3)                      <---------ARR11(3)           <-----------HVH21                      --------->ARR14(2)          ------->GAMYB                    ----------->ARR10            <------------AtMYB77           <---------ANAC58        <---------------AGL15                    <<<<<<<<<TAC1                  <---------ANAC46    <---------ANAC46<---------YAB1       <----------DOF2              <---------YAB1 ------->ANAC55(2)--------->YAB1         <---------DAG2    --------->ZAT6       <---------ANAC58 >ATHB12--------------->AGL15           <---------DAG2  <----------DOF2  <---------YAB1          ----   caagtgatgtctaaatatagtgatgatcctctctctctctcaccttttccaactgtcactttcactatctatatgattactgacttgttcaaacccctaa  1070100                                                                           <---------YAB1                                                                         ----------->GT1                                                                       <---------ANAC58                                                                       <---------ANAC58                          <---------ATHB12                       <---------DAG2                         ------>MYB46(1)                      ------>ZmHOX2a(1)                   <--                         ------>MYB83                         --------------->AGL15          <-------              <---------ANAC58<---------DAG2                  <---------------AGL15          <-------         <----------DOF2--------->WOX13(1)                   <-----------------AGL3          <-------   <----------DOF2    --------->MYB46(3)                     <-----------------AGL2      ------->MYC3   <---------DAG2   <-----------GT1    <-------TEIL   <----------DOF2  <---------ANAC46  <-------MYC3 ----->ZAT6   <---------ANAC58<----------DOF2    <----------DOF2 <----------DOF2---------->DOF2   <--   ctctcctttttcttttgcttcttaaccaatcactttataaattcatacattcttttctttcttcctacttttggcttgtgataaaagaacatgtggcttg  1070200    --------->ARR14(2)    ------->TEIL    <---------ARR11(1)                                                        <---------AHL20(2)    <---------ARR14(2)                                                       --------->AHL20(2)   <---------CCA1(2)                                                      <---------ICU4   <---------ARR14(1)       --------->AHL20(1)                           --------->ICU4 -------WRKY12             --------->AHL20(2)                            --------->MYB46(3) --ANAC46  --------->ARR11(3)                ---------->DOF2           <-----------GT1 --ANAC58  <-----------ARR10<---------AHL20(1)<---------TOE2(3)    <---------TOE2(3)               >> --ANAC58  <---------ARR11(3)              <<<<<<<<<MYB98       <---------AHL20(2)                <-- -------WRKY38(1)   ------>NtERF2  ---------->DOF2              --------->AHL20(2)  <---------ANAC46   tcaacgtatctaatatctatgcctccaaaatatatatgaaagtatgttaaagtagattatacatattttaatgtaaccattatatcgcttgaaaactata  1070300                                                                            --------->YAB1                                                                          <---------YAB1                                                                         --------->TOE2(3)                                                                        --------->YAB1                                                                        <--------HAHB4                                             --------->bZIP60(1)        --------->ATHB12                  --------->YAB1             <---------bZIP60(1)        <---------ICU4             --                 <---------YAB1              <---------ETT(2)          --------->ICU4            <---               <---------ICU4             ----------->TGA1      ----------->GT1              --------               -------->ATHB1           --------->YAB1        <---------ZAT14           <---------AHL20(2)               --------->YAB1           <---------ICU4        --------->ZAT14           --------->AHL20(2)              <---------ATHB51<----------ARF1<----------ID1   <---------ZAT18          --------->AHL20(1)              <---------AHL20(2)     --------->YAB1       <---------------AtSPL8       --------->AHL20(2)        ----------->GT1 <----------DOF2--------->ICU4     <---------------AtSPL3 ----------->GT1----- >>>>>>>EIN3  --------->AHL20(2) ---------->DOF2    --------->ATHB12   <---------YAB1  <---------AHL20(1) -----TEIL    --------->ICU4 <---------------------WRI1<---------ZAT6  <---------ATHB12<---------AHL20(2)   tacattggactcgtaaattattatagctttgggagaaaagaataatgacgacaatgagtgatagtacagtttaatcattaatagagaaataaaattagat  1070400                                                                       <---------ANAC58                                                                       <---------ANAC58                       ---------->DOF2                        <---------MYB46(3) ------->TOE2(3)  <---------AHL20(2)                     <---------ANAC46 ----TEIL     <---------RVE1(1)                <---------ANAC58  <---------MYB46(3)      --------->DAG2 ->MYB59     --------->ARR11(3)                <---------ANAC46 <---------YAB1          ---------->DOF2 ---->CCA1(2)<---------ARR11(3)                <---------ANAC58 <---------WOX13(1) ----------->GT1   acatcaaactttggagatttttaatcaaagactattttgggtttcattttcttgtagttaggggtgattgttgtcttgttgagaatgctaaaaagtatta  1070500  Previous    Next  AGI:  At5g03960.1    Description:  IQD12 (IQ-domain 12); calmodulin binding. similar to calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G76705.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23353.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 1068259    to: 1069977    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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