Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->YAB1          --------->ZAT6                              --------->AHL20(2)     --------->YAB1                           --------->ANAC46    <---------YAB1               <----------DOF2      <---------AHL20(2)   <---------TOE2(3)       --------->WRKY18(1)--------->ANAC58                                 <-----  --------->YAB1   <---------DAG2<---------DAG2 --------->AHL20(2)                             ------ ----->ARR11(3)    <----------DOF2            --------->ANAC58                   <---------AtLEC2   atattgatgataacactaagactttttgagtcaagctttttgttttccaagtaaatttaaatgaaaatttcatccatgtttttccatggattgagaagaa  1047900                                                                                  --------->HSFB2a(2)                -------->P                                            <-----------GT1         ----------->GT1                                              --------->YAB1                <        --------->DAG2                                            --------->AHL20(2)        ---------       ---------->DOF2                                        --------->ICU4<---------TOE1(2)       <     <------ZmHOX2a(1)                                      ------->TEIL    <---------TOE2(2)  ------    <----------ID1             <---------AHL20(2)    --------->AHL20(2)  --------->YAB1   ------>MYB83 ----ARR11(3)  ------->GAMYB  --------->AHL20(2)     <---------AHL20(2) <---------YAB1    ------>MYB46(1) --->ARR11(3) --------->MYB46(3)             --------->MYB46(3)  <---------YAB1   <---------HSFB2a(2)   ctcaataggaaaagtaacaaccatgtattagatttaatataacatgaacaaacatttatatgcacttattatttatcatatgtttcagaaccagccttag  1048000                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                               ------ ---------ANAC58                          ----------->GT1                                     ------- >TOE2(3)                                 <---------TOE2(3)  <---------WRKY38(1)            --------- ---------ANAC58             <---------ICU4  <---------AHL20(2)  ---------->DOF2        --------->DAG2 --->MYB52(2)     <---------CCA1(2) <---------TOE2(3)       <<<<<<<<<WRKY6             ---------->DOF2   tttcttgctcatgtctcttcaaatctcttcatcagtataagattaagttaattttgttcatagtcaacaaagaaactaatgtgttttggtaaagtaacga  1048100                             <---------RVE1(1)                             <---------CCA1(1)                 <------MYB46(1)                            <---------ARR11(3)              <---------MYB52(1)                            --------->ARR14(2)       <---------ANAC58 <---------DAG2             --------->ARR11(3)       <---------ANAC58 ------>AtMYB61     --------->LBD16          <---------WOX13(1)<------MYB83 -------ALFIN1    <---------LBD16         <---------YAB1--------->SPL7                             <- ----->MYB46(3) --------->ARR14(2)     --------->LBD16<---------SPL7                       <--------- ->GAMYB        <---------ARR14(2)   <---------LBD16--------------->AtSPL3            <---------At4g35610 -->MYB46(3)   <---------MYB52(1)  <-----------GT1  <---------------AtSPL3           <-----------GT1 >MYB52(1)<-----------GT1 <---------TOE2(3)--------->ATHB12--------->ATHB12          <-----------RAV1(1)   ccactctatgttgaaccgtttccggtttaagatattctaaccggatgattgagagtcgtaccgattggtttgaatcggttttggattttgctgctctatc  1048200                                      --------->HSFC1(2)                                      <---------HSFC1(2)                              --------->ANAC58                            <---------LBD16                                   --------->GLK1(1)                         <-----------GT1                                     <---------ARR14(2)                  ------------>CBF  --------->DAG2                        <---------ANAC46                 --------->TOE2(3) ---------->DOF2              --------->At4g35610                <---------ICU4--------->ANAC58                  <---------At4g35610                --------->YAB1--------->AtLEC2           <---------AHL20(2) <------NtERF2      ------ --------ANAC46--------->ICU4 --------->ANAC46           --------->AHL20(2)--------->LBD16    *TSS -DOF2     --------->ARR11(3)--------->LBD16      <-----------GT1        <---------LBD16<----------DOF2   gtcgtgggagagagataatcatcaatttttccaggcaaaaagcttcgattttgaaccatataaatcatctcccatggcggaaatcgaagtctttaactaa  1048300                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                  --------->ALFIN1                                                                                <---------O2                                                                                =====================                                       --------->ALFIN1                         --------->TGA1a                                       <---------ANAC46                         <---------TGA1a                                     <---------ANAC46                           =====================              --------->DAG2         <---------ANAC58<---------ANAC58<---------TOE2(2)             ---------->DOF2         <---------ANAC55(1)            --------->STY1(1)          ------     >>>>>>>>>TBF1        <---------AHL20(2)  --------->ETT(2)      <---------STY1(1)      --------->YAB1  >>>>>>>>>TBF1   <----------DOF2    <---------ANAC58<---------ANAC58<---------TOE1(2)    <---------YAB1 ---->DOF2 --------->ARR11(3)        <---------bZIP60(2) <---------GLK1(2)      --------->O2 <-------   agaagaagaagaagataaagctttgtaatttatagaatggcgtgtgtatcgacatgcttgattctctcccctaggttaactcaagtgggtttatcatcaa  1048400                            ==============HOX2a_HOX2a                            ------>ZmHOX2a(1)                          ----------->RAV1(2)                        ------>ZmHOX2a(2)                       --------->GLK1(1)                       <------ZmHOX2a(2)                      --------->ARR14(2)                      <---------ARR11(3)                      --------->ARR14(3)                                         <-----------HVH21                      --------->AGP1                         ------->GAMYB      <---------TGA1a                      --------->ARR11(3)                     =============================MYC_MYB                      <---------AGP1                      --------->MYB52(1)    --------->O2                      <---------ARR14(2)         --------->HSFB2a(2)       --------->ZAT18                      <-----------ARR10         <---------LBD16  <---------AtMYB61    <----------DOF2  <---------CCA1(2)     ===============================================bZIP_DOF =====bZIP_DOF      ----------->ARR10<---------MYB52(1) --------->DOF5.7(2)--------->ZAT14 =====bZIP_DOF  <---------At4g35610 <-------GAMYB<---------HSFB2a(2)--------->ALFIN1 ---->DOF2      --------->At4g35610------>ZmHOX2a(2)<---------GLK1(2)      <---------ZAT18 --YAB1  <---------YAB1<---------GLK1(1)   <----------DOF2<---------DOF5.7(2)   --------->TGA1a   agaagccttttttgattcggctcagatctcctgttgatcgttactcttttcccagaatgttaacggagaggtgtttgagcactcgtcggaagtttaatcg  1048500                                                   --------->YAB1                                                  <---------ATHB12                                                 --------->ANAC58                                                --------->WOX13(1)                                               <------NtERF2                                              <---------ZAT18                                              ------>NtERF2                                             --------->RAP2.3(2)                                            <------NtERF2                                            --------->RRTF1(1)                                            --------->RAP2.3(1)                                           <---------ORA47(2)                                           <---------RAP2.3(1)                                          <---------RRTF1(3)                                        -                                          <---------DEAR3(1)      <------MYB83                   ----                                          <---------RAP2.3(2)     <------MYB46(1)                ----                       <---------ANAC46   <---------RAP2.3(3)    <---------MYB46(3)              ----                      <------NtERF2      <---------At4g35610     --------->ALFIN1               <----              <---------REM1(1)          --------->At4g35610    <---------WOX13(1)              -----            <---------ANAC46       <---------TOE1(3)           <---------ARR14(2)             <------           --------->ALFIN1        <---------TOE2(3)    <-----------RAV1(2)----------->HVH21<--------           <---------AtMYB61       --------->DAG2--------->ANAC58<---------AtMYB61     ------>NtERF2<   <---------GLK1(2)<---------DEAR3(1)  --------->MYB52(2)--------->ZAT2 ----------->GT1   <---------   ccatggaatcgctgtggtgaaggctgcgagtttagataaggttagcggcgcaatcaaaccaggtggattggtggagagtgacaagttgccgactgatgta  1048600                                   <------NtERF2                                  <------NtERF2           <---------ANAC58                                <---------ANAC46          <---------ANAC58                                <---------LBD16           <---------ANAC46    --------->TOE1(2)         --------->TCP20        <---------REM1(1) -------->ARR14(2)         <-----------RAV1(1)       <---------bZIP60(2) ----->ANAC46              --------->ALFIN1     <------MYB46(1)             <---------TOE1(3) ----->ANAC58            <---------ANAC58      <---------MYB46(3)           <---------TOE2(3) ----->ANAC58            <---------ANAC58      <---------AtMYB61       <---------ANAC58 -----LBD16          --------->At4g35610    <-----------RAV1(1)        <---------ANAC58 -->TEIL             <---------At4g35610   <------------AtMYB77        <---------ANAC46         <---- ---SPL7   <---------MYB46(3)<---------RAP2.6(2)<------MYB83          <------NtERF2             ----- -------AtSPL3     <--------P--------->ALFIN1 <---------MYB52(1)    --------->ALFIN1       ---------- ---------ARR14(2)--------->At5g28300    --------->MYB52(1)      <---------AtMYB61     --------->At4g35610 ---------SPL14  <---------ANAC46 --------->LBD16    <-----------RAV1(1)<----------DOF2<---------At4g35610   cggaaacgagcgatggatgcggtagatgagtgtggccggagagtaactgttggtgatgttgctagtagaggtggcttgaaggttactgaagctcagacag  1048700              <---------At4g35610              --------->At4g35610            <---------RAP2.3(2)            <---------RAP2.6(2)    --------->ANAC46    --------->ANAC58                                     <---------ANAC58                     -------    --------->ANAC58                                     <---------ANAC58                 <------ZmHOX2a(1) -----At4g35610 ----------->HVH21            <---------MYB52(1)                           =========== ---->At4g35610<---------ANAC46         <---------ARR14(2)                          <----------DOF2 ->HVH21---------->DOF2--------->ATHB12 --------->ARR14(2)                     <---------At4g35610   ctcttcaagctatagcggctgatactgatgggtttttggaggtattcgctagttcaatttcatgcccattaactcaaattgagatgctttgaggagagtc  1048800  Previous    Next  AGI:  At5g03900.1    Description:  Identical to Uncharacterized protein At5g03900 precursor [Arabidopsis Thaliana] (GB:Q8GW20;GB:Q8L632;GB:Q8LG15;GB:Q9FFM9;GB:Q9LZB9); similar to unnamed protein product [Vitis vinifera] (GB:CAO15906.1); contains InterPro domain HesB/YadR/YfhF-like (InterPro:IPR000361) Range:  from: 1048294    to: 1052386    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version