Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ANAC46                                                                             --------->ANAC58    <-------TEIL                                                        --------->ZAT14   --------->CCA1(2)                                                    <---------REM1(2)  <---------ARR14(2)                                                    <---------ZAT14  --------->ARR14(2)                                                    <---------ZAT18 ->MYB46(1)                                                             --------->ZAT18 ->MYB83                                                              --------->ZAT14 ---MYB46(2)                                        --------->YAB1    --------->REM1(2) ---MYB59                         --------->At4g35610                 <---------ZAT14 --------->ANAC58 ---MYB111(1)                     <---------At4g35610       <----------DOF2  --------->ANAC58 ---ARR10            <---------ATHB12              <---------ATHB12   <---------ZAT18 --------->ANAC58 -->AtSPL8  ------->GAMYB     --------->AtLEC2     --------->ICU4   --------------->AtSPL8     ------   ctcagatacaacaacgaaatcaaatcaattcaatgcagataacaacaattgaaatcatcaagctttcgactgtgtacacactcaactcaagctaaaaaaa  1041100                                                                                             --------                                                                                             --------                                                                                             --------                                                                                         --------->ANAC58                                                                  ----------->GT1        --------->ANAC58                                                                 ----------->GT1         --------->ANAC46                      ----------->GT1        --------->ANAC58  --------->ARR14(2)       ------->TEIL                    ----------->GT1          --------->ANAC58  --------->GLK1(2)       <---------ALFIN1                  ---------->DOF2         <---------ARR14(2)   <---------ARR14(2)     <---------ZAT18    --------->At4g35610                   --------->ARR14(2)  <---------ARR14(2)      --------->ZAT14 ---->DOF2   <---------LBD16            --------->LBD16    ----------------->AGL1     <---------At4g35610   agaatcaactcaatttgggggaaagagaaataaacgattacccagaaacgaaaacaccagtgccgaatcggaaaaacaatccaattgctgcacccaagac  1041200                                                                                          <----------                                             <---------ANAC46                             <----------                        <---------SPL7       <---------ANAC58                            <---------TGA2(1)                      <------NtERF2          <---------ANAC58                            <---------ANAC58                     ------>NtERF2          <------NtERF2                                --------->bZIP60(1)                    <---------DEAR3(1)     ------>NtERF2          <---------ZAT18        --------->TGA2(1)                    <---------RAP2.3(3)    <---------MYB46(3)     --------->ZAT14        <---------bZIP60(1)                 ----------->HVH21       <---------MYB52(1)       <---------ZAT14        <---------ANAC58              --------->ARR14(2)        --------->LBD16    <------ZmHOX2a(1)   --------->At4g35610              <---------ARR14(2)      <------NtERF2     <------ZmHOX2a(1)      <---------At4g35610 ->ANAC58   --------->LBD16           <-----------RAV1(2)--------->ALFIN1    --------->MYB46(3) ->ANAC58  --------->HSFB2a(2)        <---------LBD16<---------LBD16       ----------->RAV1(1) ->ANAC46 <---------LBD16     <---------MYB52(1)     <-----------RAV1(2)  --------->MYB46(3)   atcgaagagttttccggatttgacggcgaaccgttttggctccggtggcttgaaaccaggaggagcagtgaacacaacaacagctccagtgtcgtcactg  1041300                                 --------->At4g35610                                 <---------At4g35610                               <-----------RAV1(2)                              <-------TEIL                           <------MYB46(1)                           <---------HSFB2a(1) <---------WRKY18(1)                           <------MYB83     <----------DOF2                           --------->HSFC1(2) --------->WRKY45                                     ==                           <---------HSFC1(2) --------->WRKY12                             ----------                           --------->HSFB2a(1)--------->WRKY38(1)                       >>>>>>>>>TBF1  <---------ANAC46    --------->ANAC58    <---------HSFC1(2)                         >>>>>>>>>TBF1 -- -HVH21               --------->ANAC58    --------->HSFC1(2)                   --------->HSFB2a(2)=== -TGA1               <---------LBD16<------ZmHOX2a(1)                          <---------HSFB2a(2)<--   gtcttcgtggagactgaaacagactcggaaggttcagaggaagaagctttgaccataactagggttcgaattgaacttcttcgcgaagaagaagaaagcg  1041400                       <---------ARR14(2)             --------->ALFIN1            <-------GAMYB           <---------MYB46(3)         <---------ARR14(2)          <---------TOE1(2)   --------->ZAT18          <-----------GT1     <---------ARR14(2)--------->ARR11(3)   --------->LBD16                                         <     --------->ARR14(2)<---------ARR11(3)   ------>NtERF2                                         ---     --------->GLK1(2) --------->ARR14(2)  --------->ANAC46                                   <------ ============================HOX2a_HOX2a   --------->ANAC58                                  <------- >DOF2    <---------TOE2(2)   <---------ZAT18 --------->DEAR3(1)                           <---------AHL20(2) ---->ZmHOX2a(2)      <------ZmHOX2a(1)    --------->ANAC58                            <---------AHL20(2) ============================HOX2a_HOX2a  <---------LBD16                              --------->AHL20(2) ----ZmHOX2a(2) <---------ANAC46      --------->ARR14(2)   <<<<<<<<<TBF1       *TSS   --------->AHL20(2)   atcggagaatcggaggttgagggaggatattgttcactagtatccccgccatcgatttttcttcttctaatttgtttttggcaattcatttattttaacg  1041500                                                             <---------ARR11(3)                                                  <---------TOE2(3)                                                  <---------TOE1(3)                     --------->AHL20(2)                                             <---------ICU4  <---------AHL20(1)     ----------->GT1 ---------MYB52(1)       <----------DOF2    <---------YAB1   --------->ARR11(3)   <---------ANAC46 -------->GT1            <---------DAG2     --------->ICU4   --------->AHL20(1)   ----------->GT1 ---TOE2(3)         <----------DOF2       --------->YAB1------------>CBF  <---------ANAC58 ----GT1  --------->ANAC55(1)    <----------DOF2  --------->MYB59         <---------ANAC58         <-   tcgttatatcacacttaatgggccttacttttgggccttaagagtcataatttaggtttccaatattttgctcttgacttgttggagtgaaaaaatatga  1041600                                                                     <---------DOF5.7(2)                                                                     --------->MYB52(1)                                                                    --------->ZAT14               <--                                                            <-----------GT1                     <----                                                       <---------RVE1(1)                       <-----                                                       <---------CCA1(1)                       ------                                                      <---------ARR11(3)                      -------          --------->At5g28300                         <---------GLK1(2)                      <-------          --------->DOF5.7(2)                         --------->ARR11(3)     ---------->DOF2<--------         ----------->GT1                             <---------RVE1(1)     <------ZmHOX2a(2)<-------- ----------->GT1          <----------DOF2      <-----------HVH21    <---------WRKY12        <-------- ------GAMYB      <---------AHL20(2)          <----------DOF2       <---------ZAT14        <-------TEIL   gcgttgtgaaacggtaacatataatgggccttaattttgggccttaagctttcagagattttttactcagtaaacggatcaaagagtcttaagtgcgttt  1041700       <---------YAB1     <-----------GT1 -------YAB1 -----DOF5.7(2) ----ARR14(2) --->ARR14(2)                             <<<<<<<<<<<<<<<<<LFY -->DOF5.7(2)                            ----------->HVH21                --------->At5g28300 ---DOF2                                 --------->ETT(2)                 --------->DOF5.7(2) -ANAC58                     --------->ATHB12   ----------->GT1  ----------->GT1 -ANAC58           <---------ANAC46 <---------ANAC58         ------->TEIL----------->GT1            - -ANAC46          <---------TOE2(3) <---------ANAC58         <---------TOE2(3)     <-----------GT1 --   acgatttttactattgttctaacgtatagtttgatttgacttgttgacagtggaaaaaatatgaacgttgtgaaacggtaacatttttcttcccgtttga  1041800          --------->ATHB12         --------->AHL20(2)         <---------AHL20(1)         --------->AHL20(1)         <---------AHL20(2)      --------->AHL20(2)      <---------AHL20(2)      --------->AHL20(1)      <---------AHL20(1)    <---------AHL20(2)    <---------AHL20(1)                                            <---------GLK1(1)   --------->YAB1                                                 --------->GLK1(1)   ----------->GT1  <---------YAB1                                        <---------------AGL15      <---------ANAC58 --------->AHL20(1)                                     --------------->AGL15      <---------ANAC58 --------->AHL20(2)        <---------At4g35610         <---------ANAC58        <----------DOF2 <---------AHL20(2)     <-------TEIL                   <---------ANAC58  <---------ARR14(2) -------->YAB1         --------->GLK1(2)            <----------DOF2      --------->ARR14(2)  <------- ------->ICU4   ---------->DOF2           --------->AHL20(2)  --------->YAB1 ------>ZmHOX2a(1)   aattataatattttattggaaagagattcagataatgcctctctataaatactcctttcttgaatcagaaatctgaatcctctttacttggttattttct  1041900                                              <---------DAG2                                              <----------DOF2                                     <---------MYB52(1)  --------->HSFB2a(2)                                   <---------ANAC58      <---------HSFB2a(2)                             --------->AHL20(2)      --------->GLK1(1)                             <---------AHL20(2)      <---------GLK1(1) --AHL20(2)      <----------DOF2   <---------ANAC58<------ZmHOX2a(1)     --------->ETT(2)          <-   tacaaatgtcgaatacagtctttttttttaaaaaattccgttcttctactttaggagttctcgtagtcaaacttgtctacattgctcattagccgagaga  1042000  Previous    Next  AGI:  At5g03880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10000.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15903.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 1038507    to: 1041479    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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