Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->At4g35610                                                                       --------->ALFIN1                                                                      --------->TOE1(2)                                                                      ------->PIF4                                                                      ------->MYC4                                                                      ------->MYC2                                                                      <-------PIF5                                                                      ------->PIF5                                                                      <-------MYC4                                                                      <-------MYC2                                                                     <---------TGA1a                                                                     --------->PIF3(3)                                                                     --------->O2                                                                     ================================                                                        --------->ANAC58     <---------At4g35610                                                   --------->DREB2C(2)<-------MYC3                                                   --------->ATERF1(2)------->MYC3                                                   <---------ATERF1(2)<-------PIF4                                                   --------->DEAR3(1)<---------PIF3(3)                                                  <---------LBD16    <---------O2                                                 --------->MYB52(1)  --------->TGA1a                                             <---------At4g35610    ------------>OsbHLH66                                           --------->DAG2         ---------------->PIF3(2) --------->YAB1                                          =====================================bZIP_DOF   <---------YAB1                                          ---------->DOF2     <---------ICU4--------->ANAC58       <-                    ----------->GT1     >>>>>>>>>GATA-1 --------->ANAC58    --------->ANAC58---------   tggaacttacaagttagtcgacgagataaatctgaaacgatagataaagctcaccggcaagcaaacatggcacgtgggaagctaaacttgttatcaaagt  994800                                        ----------->GT1    ----------->GT1                        --------->HSFB2a(1)               ----------->GT1                        <---------HSFB2a(1)       --------->DAG2   <---------YAB1 ==bZIP_DOF       --------->ZAT14 --------->AHL20(2)     --------->DAG2 --------YAB1<---------ZAT14      <---------AHL20(2)   ---------->DOF2   <-----------GT1 ->DOF2      --------->ZAT18--------->TOE2(3)   ---------->DOF2 --------->ICU4                 <-----   tattcttcaacattttgcactgaagaattttcttaataaaatcagtgaaaaaaaggcaaaagggtaattctcatttcacatttgtttccacaaactactt  994900                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                          --------->KAN4(2)                                                                                         <---------KAN4(1)                                                                                         --------->KAN4(1)      --------->YAB1                     --------->MYB52(1)                    --------->GLK1(2)   --     <---------YAB1               ----------->GT1                             <---------GLK1(2)    <-   --------->ATHB51          --------->AHL20(2)                   =============================HOX2a_HOX2a   <--------HAHB4          --------------->AGL15                  ------>ZmHOX2a(1)     <------ZmHOX2a(2)   --------->YAB1          <---------------AGL15              <---------ARR11(3)        <---------YAB1   -------->ATHB1         ----------------->AGL2              --------->ARR11(3)       <---------ARR11(3)   <---------ICU4         --------->TOE2(3)--------->ZAT6     --------->ARR14(2)       --------->ARR11(3)  --------->ICU4          <-----------------AGL3     ----------->GT1        <---------TOE2(3)    <--- -----DOF2          <----------DOF2      <-----------GT1      <---------ARR14(2) --------->YAB1<-----   ttgaattattatagagttgtctcttttttcttaaaatagaaattaacagttcataatgtaacaaaatcctgcatttttaagaatcttaagatcattccca  995000            <---------AHL20(2)         --------->YAB1    --------->ICU4    <---------YAB1 ------->ANAC55(2)                                                             --------->ICU4 ------->ANAC46                                                                <---------ATHB51 ------->ANAC55(1)                                               <------------CBF  <---------AHL20(2) ------->ANAC58                                                 --------->ATHB51  <---------YAB1 ------->ANAC58          --------->TOE2(3)                      --------->ATHB12<---------ICU4 --------ANAC55(2)       <----------DOF2                        -------->ATHB1 --------->AHL20(2) ------ALFIN1      --------->MYB111(1)                         <---------YAB1  <---------AHL20(2) ----ALFIN1--------->AHL20(2)                           <----------DOF2      --------->YAB1        <-   cacgtaatgaataataaatagtagttactttaatcgtcgttctactagttgggccatactttggtattattgggctcaaaaataattaatgggcttaagg  995100                                                                 <------NtERF2                                                                ------>NtERF2                                                               --------->RAP2.3(3)                                                               --------->RRTF1(3)                                                               --------->RAP2.3(2)                                                              --------->ORA47(2)                                                              --------->ERF1                                                              --------->DEAR4(2)                                                              --------->RAP2.6(1)                                                              --------->ATERF1(1)                                                              <------NtERF2                                                              --------->RRTF1(1)                                                              --------->RAP2.3(1)                                                             ------>NtERF2                                                             <---------RAP2.3(1)                                                             --------->ABI4(2)                                                             <---------ATERF1(1)                                                            <---------DEAR3(1)                                                            --------->DEAR3(1)                                                           *TSS--------->DEAR3(1)                                                           --------->ATERF1(1)                                                           --------->RAP2.3(1)                                                           <------NtERF2                                                          <---------ORA47(2)                                                          <---------RAP2.3(1)                                                          <---------DEAR3(2)                                                          <---------ERF1                                                          <---------RRTF1(1)                                                          <---------ATERF1(1)                                                          <---------RAP2.6(1)     --------->ANAC58                                                         <---------RAP2.3(2)      --------->ANAC58                                                         <---------DEAR3(1)    <---------ARR14(2)                                                         <---------RAP2.3(3)   --------->ARR14(2)                                                         <---------DREB2C(2)  <------NtERF2                                                         <---------At1g77200 --------->LBD16                                                         <---------RRTF1(3) <---------ANAC46                                                       <-----------HVH21    --------->ETT(1)                                                      --------->TGA1a --------->MYB111(1)                                                      <---------O2    <---------MYB46(3)                                                      <---------TGA1a --------->MYB55(2)                    <------------CBF                  --------->O2<---------MYB46(3)                 ------->GAMYB                        =========================MYC_MYB                 ===============================================MYC_MYB--------->At4g35610                --------->ANAC46                      =============================================bZIP_DOF                --------->bZIP60(2)                 --------->MYB52(1)--------->MYB52(2)           --                --------->ANAC58                    <---------DOF5.7(2)<---------At4g35610         <-                --------->ANAC58                  <---------MYB52(2)  --------->MYB46(2)   --------->ZAT2         --------->RAP2.6(3)               ---------->DOF2------>NtERF2<-------GAMYB       <---------ZAT2        --------->MYB52(1) <------ZmHOX2a(1)     --------->At4g35610<---------MYB52(1)  ---------->DOF2 -----NtERF2  <---------ATERF1(1)          =====================bZIP_DOF   <---------LBD16------->TEIL   cctcattagaaaacggcaacgccattgaaggagtctacggtgaaggaaagaagctaacgtcggcgccgtcgttagttgccggagacgcgatgaagctcgg  995200                                                                                --------->LBD16                                                                                <---------LBD16                                                                               <---------ANAC46                                                                               <---------LBD16                                                                              <---------LBD16                                                                         --------->DEAR3(1)                                                                        <------NtERF2                                                                       <---------At4g35610                                                                      <---------ANAC46                                                                     --------->RAP2.3(1)                                                                     <------NtERF2                                      --------->ATERF1(1)           <---------ATERF1(1)                                ------>MYB83  <---------MYB52(1)    ------>NtERF2--------->LBD16                                ------>MYB46(1)                    --------->ALFIN1                               --------->MYB52(1)                  <---------DEAR3(1) xxxxxxxxxxxxxxx            <---------GLK1(2) --------->TOE2(2)          ------>MYB46(1)--------->ATERF1(1) ------->ALFIN1               --------->TOE1(2)          ------>MYB83--------->ATERF1(1)            < --------ZAT6           <----------DOF2      <-------GAMYB<---------ALFIN1<---------ATERF1(1)     <--   agtgtttgtatacagattatacagagctttaacctacggtgtctccccgttgattcacctacacatacggtggcgcagactccggggattagagcatttc  995300                              --------->LBD16                     <---------WRKY38(1)                  <------MYB46(1)                                            <---------TOE2(3)               --------->ARR14(2)                                            <---------TOE1(3)               <---------ARR14(2)           --------->LBD16                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)               <---------MYB52(1)  --------->SPL7                         <----------DOF2              <---------SPL7 --------->DEAR3(1)       <---------ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <---------MYB46(3)  <---------SPL7      <---------CCA1(2)<---------CCA1(2)   --------->WRKY12<-----------HVH21     --------->MYB52(1)      --------->ANAC58   --------->WRKY38(1)       --------->ANAC46    ------>ZmHOX2a(2)   ------>NtERF2  <---------MYB52(1)--------->WRKY18(1) --------->AtMYB61        --------->ANAC46 xxxxxxxx>smallRNA(fl3)     --------->SPL7<---------LBD16        --------->ANAC58 ---------MYB46(3)<------MYB83------>NtERF2<---------LBD16     <-----------GT1 -------At4g35610--------->MYB59 --------->At5g28300<----------DOF2 --------->DEAR3(1)       <xxxxxxx   agccgttggcccgagcggttcggtcatccctccgccgtaagaccaccgggatcgcttatctggtttcacgccgtctctttaggttacaatctctatgacc  995400                                                                              <---------YAB1                                                                           <---------YAB1                                                                         <---------ICU4                                                                         --------->YAB1                                                                        --------->ICU4               ------->GAMYB                                <---------------AGL15              --------->ANAC58                             ----------------->AGL1              --------->ANAC58              --------->ATHB12--------------->AGL15                  <-              --------->ANAC46             <---------------AGL15  <---------HSFB2a(2)             <--            --------->MYB52(1)             =================================MADS_MADS             <--       <-----------GT1               <---------ICU4<---------At4g35610  <---------ATHB51        <---- xxxxxxxxxxxxxxxxsmallRNA(si3)       --------->ATHB12      ----------------->AGL2      --------->MYB52(2)   ttcaaattttaactcaacgaaacaaaactgttcaactcttcattgctcattgaagctaatctccaaatcgagaaattatgatttttggtttgtttgtttt  995500                                                                               ----------->TGA1------           ----------->HVH21                                                 <---------ICU4    <-----         <---------At4g35610         <---------At4g35610                    ------>ZmHOX2a(1)  <-----         --------->At4g35610         --------->At4g35610                  --------->YAB1 ------>NtERF2       <-----------RAV1(2)       <---------MYB52(1)                 >>>>>>>>>>WRKY63     ----------->RAV1(1) --------WOX13(1)               --------->LBD16         ---------->DOF2 <---------ARR14(2)     ------ -------ANAC58            <----------DOF2         <---------ATHB12  <-----------GT1     --------->ETT(2) -------ANAC58          <---------At4g35610   --------->ZAT14   --------->ARR14(2)    ------>NtERF2 -----YAB1 --------->ALFIN1   <---------LBD16 <---------ZAT14   <---------ARR14(2)   --------->DEAR3(1)   gagtgactctcaggtgaaggaatggctgctattccggtgatcagacactgcaatgaagtaaagtcagatttgactatcctaatgacgacgacgacagtat  995600                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 <---       <-----------RAV1(1)          --------->ARR11(3)                                          <---- --->ARR14(2)                       <---------ARR11(3)                                       <------- ----ARR11(3)                       --------->GLK1(2)                                     ------->TEIL ----ARR14(2)            <---------ANAC58         --------->DAG2                         <---------CCA1(2) --->GLK1(2)             <---------ANAC58        ---------->DOF2    <----------DOF2  <----------DOF2   ctgcattgtatgtggctcattgttgtttcttacataaaaatctaaaattgaaaaagttcaaagtttttgtcttttgtaatttgatttctttgaatctttt  995700  Previous    Next  AGI:  At5g03770.1    Description:  3-deoxy-D-manno-octulosonic acid transferase-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO15996.1); contains InterPro domain Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; (InterPro:IPR007507) Range:  from: 995159    to: 997847    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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