Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->GLK1(1)                                                                    ------->TEIL                                                                    <---------ARR11(1)                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                   <---------ARR14(1)                                                                   <---------CCA1(2)                                                               <-----------HVH21                                                              <---------O2                                                              --------->bZIP60(1)                                                              --------->TGA1a                                                              <---------bZIP60(1)                                                              <---------TGA1a                                                              --------->O2                                                           --------->At1g77200                                                           ----------->HVH21                                  --------->ARR14(2)       --------->DEAR3(1)     <---------CCA1(2)                                  ------->TEIL             --------->DREB2C(2)  <---------ALFIN1                         <---------ANAC58                 --------->DEAR3(2)--------->ZAT2     ----------->HVH21   <---------ANAC58       --------------------->WRI1  <---------ZAT2      ----- >ZmHOX2a(2)  <---------AtLEC2   <---------CCA1(2)     --------->MYB46(3) ------>ZmHOX2a(1)    ------   aaaaccattgacatttgcattgttatgtcgtctctgtatcccatgaacgagtctggaatcaccgacgtcgtatctcctagctccatctcttcttactccg  990100                                                                  <------ZmHOX2a(2)     --------->ANAC46                                                                 --------->ARR11(3)     --------->ANAC58                             ---------->DOF2                     <---------ARR11(3)<----------ARF1                            --------->AHL20(2)         --------->ANAC58 <---------ARR14(2)       ---------->DOF2      <---------AHL20(2)         --------->ANAC58 --------->ARR14(2) ->NtERF2              <------ZmHOX2a(1)           --------->ANAC58     <---------GLK1(2) --->DEAR3(1)       <------ZmHOX2a(1)              --------->ANAC58  <---------TOE2(3)  --------->ANAC58   acgagaacaaaaagaaaacagaggaggaatttaaagaaaaaaacaggggagggaagcaagaaccctagatcaaggattctcttgtgagacaagcaatagg  990200                    --------->ARR11(3)                                                              -                    <---------ARR11(3)                        --------->MYB52(1)                    <                 <---------TOE2(3)                         --------->ANAC58                      ----                ---------->DOF2  <---------REM1(1)       <------ZmHOX2a(1)                  ---------             <----------DOF2   <---------ANAC46    --------->ANAC58                       <---------MYB52(1)          --------->GLK1(2)   <---------AtMYB61    --------->ANAC58                    ---------->ID1         <---------GLK1(2) <----------DOF2  ---------->DOF2--------->ANAC58           <-----------GT1   gaacaatgtgagattctttaaagatgtctcttttggtgtaagaaatcaaagccaaggaaggacgaaacagaaacagagagacagagtttttcgttttttg  990300            --------->RVE1(1)           <---------ARR11(3)                          ----------->GT1           --------->ARR11(3)                        --------->DAG2     --------->At5g28300                            ---------->DOF2    ----------->GT1                             <------NtERF2  --------->SPL7                               --------->HSFB2a(2) --------->MYB52(1)                            <---------HSFB2a(2) ---------->HVH21                             --------->ETT(1)        <---------AHL20(2) ---------SPL7                                <---------LBD16      <---------ARR11(3) ------------->AGL1       ------>NtERF2       <---------ANAC46     --------->AHL20(1) >MYB52(2) --------->GLK1(2)             <---------GLK1(2)         <---------AHL20(1)             <xx   cccttacggtgaaaatctctgtcttctctgcctgagaaactcagattgtcgggaaaaaggagaattcaatattttttttatgtgttttagtttttttttg  990400                                                                                        <------------                                                                                       --------------                                                                                       --------------                                                                                       ------>ZmHOX2a(2)                                                                                      --------->CCA1(2)                                                                                      <------ZmHOX2a(2)                                                                                     >>>>>>>>>GATA-1                                      --------->ALFIN1                               <---------ARR11(3)                                   --------->DAG2                                    --------->ARR11(3)                               <---------YAB1                                        --------->AGP1                           <---------ARR11(3)                                        >>>>>>>>>GATA-4  ---------->DOF2          --------->ARR11(3)           <---------YAB1               >>>>>>>>>GATA-2 <---------AHL20(2)       --------->YAB1      <------ZmHOX2a(1)---------->DOF2       >>>>>>>>>GATA-3 xxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---------->DOF2     <---------YAB1---------->DOF2  --------->GLK1(1)   tatttaaagggttttggtaagagaagaaagataatgaaaggtggagaaggagaagatgatttttggaaagaaagaagagagaagagagatctaaaaacag  990500                                                                         <-----------TBP                                                                       <-----------TBP                                                                     --------->AHL20(2)                                                                     <-----------TBP                                                           <------ZmHOX2a(2)                         <---------ANAC58                  ------------>CBF<---------AHL20(2)                         <---------ANAC46                  =====================================HOX2a_HOX2a                         <---------ANAC58                 --------->ARR11(3) ---AGL15              <---------ANAC46         *TSS      <---------ARR11(3)---------->DOF2      <--- --->AGL2            <---------ZAT14          --------->GLK1(1)    <----------DOF2          <-------- --->AGL3            --------->ZAT14          <---------GLK1(1) <---------ARR11(3)       ------>ZmHOX2a(1)   aaacagagggagagaagacacagtgttgtgtgtgtgtgtgtgtgtgagaaatcagagagagatcaatgtctttatatataaaggctctgtccttgtgtat  990600                                      --------->AHL20(2)                                   --------->AHL20(2)                                      <---------AHL20(2)                                --------->YAB1                            <---------YAB1                                              --------->TOE1(3)                          <---------ICU4                                                --------->TOE2(3)                         <---------MYB52(1)    <---------HSFB2a(2)                   --------->WOX13(1)   <XXXXXXXXXXXXXXXXXXXXMIR1887<----------DOF2 --------->HSFB2a(2)                 <---------ATHB12 ---------CBF  <---------AHL20(2)     <---------AHL20(1)            <---------AHL20(2)-------->P -ANAC46      --------->AHL20(2) <---------AHL20(2)              ------->TEIL    --------->WOX13(1)   attgttttagactctatttaatattccattattcttttattttatttctctagaatatagagaaatgaatttttttgcaccatcaatcaaccataaattt  990700                         --------->ATHB12                         --------->ATHB51                        <---------YAB1                        --------->ICU4                       --------->TOE2(3)                      <---------ICU4                      --------->YAB1                     <---------ATHB12                           --------->CCA1(2)                    ------>MYB46(1)                <---------SPL7                    ------>MYB83                  <---------ANAC58                  <---------MYB59                 <---------bZIP60(1)                  <---------MYB111(2)             <---------bZIP60(2)                  <---------MYB111(1)        --------->YAB1    <---------ARR14(2)                   -                  --------->MYB46(3)         <---------ICU4    --------->ARR14(2)                   <                  <---------MYB46(2)      --------->TOE2(3)  ----------->ARR10           --------->GLK1(2)              <---------MYB111(1)----------->RAV1(1)  <-----------RAV1(2)          <---------AHL20(2)              --------->MYB46(3)--------->ANAC46  <---------ANAC58               <---------YAB1    <-            <-----------GT1     --------->ANAC58  <---------ANAC46          ----------->GT1     ----- <----------DOF2-------->P      --------->ANAC58<---------TGA2(2)<-------TEIL <---------YAB1<--------   gctctttctatatataactaccaaacattattgaacgacacaaacattaatgacgtccaggcgaagatacaaaacaaattgttattttaagtttctgata  990800        --------------->AGL15 --------->AHL20(2)         ----------->GT1 -------->AHL20(2)         --------->ICU4                                    <---------YAB1  <------- ---------AHL20(2)<---------AHL20(2)                                        --------->AHL20(2) --------AHL20(1)--------->YAB1                      <---------HSFB2a(2)    <---------AHL20(2) ---->AHL20(2)  --------->AHL20(2)  --------->AHL20(2)     ----------->HVH21<---------AHL20(1) -YAB1 --------->TOE2(3)<---------YAB1               --------->HSFB2a(2)    --------->AHL20(1)   <---   aaataattttcttaaaaaataaaaatgtcattgttaaaaaaaatgcttcaatcttctcgaggtgacatagatgtataatataatacaaatgtgtaattgc  990900         <---------ANAC55(2)         ----------->GT1         --------->ANAC55(2)    <---------YAB1   <---------AHL20(2)   <---------AHL20(1)   --------->AHL20(2)   --------->AHL20(1)  <---------ICU4                 <---------TOE2(3)                  <------NtERF2  --------->YAB1           <---------ANAC55(2)                    <---------ANAC58 <---------YAB1            <---------ANAC46                       <---------ANAC58 --------->ICU4            <---------YAB1                    --------->REM1(2) --WOX13(1)         <---------YAB1----------->GT1          <---------RAP2.6(3) ------MYB59  --------->MYB46(3) <---------TOE1(3)        --------->RAP2.6(2)    <------ZmHOX2a(1)   ctaattataattcgtaacaactatgaattatgtataaggttaaaactcgatagtttatagccgtctaggcgtccaaaactataggaccatctcagtcaaa  991000  Previous    Next  AGI:  At5g03760.1    Description:  ATCSLA09 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 4); transferase, transferring glycosyl groups. similar to ATCSLA02 (Cellulose synthase-like A2), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G22740.1); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.2); similar to ATCSLA03 (Cellulose synthase-like A3), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G23480.1); similar to cellulose synthase-like A1 [Pinus taeda] (GB:ABG34547.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15980.1); similar Range:  from: 985674    to: 990548    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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