Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <----------DOF2                                                        ------>ZmHOX2a(2)                                                       <---------RVE1(1)                                                       <------ZmHOX2a(2)                                                      --------->ARR14(2)                                                      <---------ARR14(3)                                                      --------->ARR11(3)                                                      <---------ARR11(3)                                                      <---------ARR14(2)                        <---------TOE2(3)            --------->RVE1(1)     --------->ZAT6          <---------ANAC58                 <---------ANAC46   <---------AHL20(2)               <-----          <---------ANAC58            --------->ATHB12--------->ARR14(3) <-----------GT1<----------DOF2 ----->DOF2<---------WOX13(1) <---------TOE2(3)   ---------->DOF2    <---------YAB1 <----------DOF2   aagaaaactcttgagtgactcacaataacgttgagattaatgactgcgtttataaagatctttttaaaatgatgtttacacttcttctttctttttttca  946700                                                                                    --------->YAB1                                                                                   <---------ATHB12                         <---------YAB1                  <---------AHL20(1)      --------->WOX13(1)              <---------REM1(1)                  ----------->GT1              --------->TOE2(3)  ----     --------->ZAT6    --------->YAB1      <---------AHL20(2)        <---------ANAC55(2)  --------->AHL20(2)   <-----------GT1 <------ZmHOX2a(1)      --------->AHL20(2)         --------->ANAC55(2)--------->TOE2(3) ------GT1   <---------TOE2(3)            <---------AHL20(2)       --------->AHL20(2) ------->TEIL   caattttacacttctaatgtaggaatcatatttgttttgtctgattaaatatagtttaatatatgtaaattaagtaagaacatcaatgaacattaaacat  946800          ---------->DOF2                             --------->AHL20(2)  --------->AHL20(1)                                  <---------AHL20(2)                       <-----  --------->ICU4   <---------MYB52(1)                <---------AHL20(2)                       <------  <---------AHL20(1)                                 --------->ICU4                        <---------TOE2(3)  --------->ARR11(3)             <---------PCF5<---------TOE2(3)                           <---------AtMYB61  <---------ARR11(3)--------->ZAT14      <---------YAB1 <---------YAB1                     <---------TOE1(3) ------->GT1---------->DOF2     <----------ID1---------->DOF2  ---------->ID1        <---------TOE2(3)   agaaaatattaacaaagagcagttaactatcaaggggaccaatttgattaaagaaattattttttgttcccattagaaattggcaataacgttgaggttg  946900                                   <------MYB83                       <-----------GT1                    --------->ARR11(3)                                                             <-                    <---------ARR11(3)  <---------ZAT18                                       <------                    <---------AHL20(1)  --------->ZAT18                                       <------                    --------->AHL20(1)  <---------ZAT14                                       -------                  --------->AHL20(1)  <---------ZAT18                                      --------->AHL20(1)                  --------->ARR11(3) <---------ANAC46                                      <---------AHL20(1)                  <---------AHL20(1) <---------ANAC58                                      --------->AHL20(2)                  <---------ARR11(3) <---------ANAC58                 <--------P         <---------AHL20(1)        <---------AHL20(2)         <------MYB46(1)                 <---------TOE2(3)     --------->AHL20(1) ----MYB46(3)  --------->AHL20(2) <---------AtMYB61                <---------TOE1(3)     <---------AHL20(2) --P    --------->AHL20(2)     <-----------RAV1(1)  >>>>>>>>>>>>>>>>>LFY              --------->AHL20(2)   ttctctcaaattaaaaaaaaaatattttctattttgttggtgtgctcttaaattccccattgttacattgaggttgccctctaaattttaaaatatttta  947000                                                                              <---------AHL20(2)                                                                             <---------AHL20(1)                                                                          --------->YAB1              XXXXXXXXXXXXXXXXXXXX>MIR398A                            <---------AHL20(2)          <---------ANAC58                                           <---------AHL20(2)          <---------ANAC58                                           --------->AHL20(2)           ---        <------MYB83                                             --------->AHL20(2)           ------>MYB46(1)        <------MYB46(1)                                          <---------AHL20(2)           ------>MYB83       <---------AtMYB61             <---------MYB52(2)        --------->YAB1--------->AHL20(2)   ---    <-----------RAV1(1)<-----------GT1------->GAMYB      --------->MYB46(3)  <---------AHL20(2)   --- --------AHL20(2)  ---------->DOF2   --------->MYB46(3) -------->P--------->AHL20(2)          ------- ---AHL20(2) <---------ZAT18      --------->ANAC46     --------->MYB52(1)<---------AHL20(2)  ------>ZmHOX2a(1) ---AHL20(1) --------->ZAT18    --------->ANAC46     <---------MYB52(2)  <---------YAB1     <-------- -->AHL20(2) XXXXXXXXXXXXXXXXXXXX>MIR398B/C   ---------->DOF2--------->AHL20(2)             <--------   ttttttttgttggtgtgcccttaaatcacccattacacaacaaacaaaaaaagagactaaccaaaaaataattttataattaattttgtttcttcctacc  947100                <------------CBF               <---------ICU4         ------>MYB46(1)         <---------ANAC55(2)          ------>MYB83 --->MYB46(1)  --------->ATHB12    --------->MYB46(3) ----->P --------->ANAC55(2)<----------DOF2 --->MYB83    --------->MYB46(3) <-----------GT1                   <----------DOF2 ->P   <---------AHL20(2)--------->ARR11(3)                     <---------ARR11(3) -MYB59<-----------GT1   <---------ARR11(3)                     --------->ARR11(3) -MYB111(2) <-----------GT1------>ZmHOX2a(2) *TSS     --------->YAB1          <----------DOF2   tacaagtatttacttaaccattgcctcgatcttttaaaccatccacattttttgaatcaccatcaacatctttctctcttctttttcttctctctatctg  947200                 --------->YAB1                 <---------ICU4                <---------AHL20(2)                --------->AHL20(2)              --------->TOE2(3)                                                               <------ --------->HSFB2a(2)       ----------->GT1                         <---------ZAT14            <------ <---------HSFB2a(2)<-----------GT1                                --------->ZAT14            <------   agtccagaaacattcacattaattacaaactgaaaaaacattgaaacttttgaataaactcacgagaagtactctgttttctcttcttactctgtttctt  947300                                     <---------HSFB2a(2)                                     --------->HSFB2a(2)                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                               <---------ARR14(3)                               --------->ARR11(3)                               --------->AGP1                               <-----------ARR10                               --------->ARR14(3)                         --------->REM1(1)      <---                               <---------ARR11(3)             <---------At4g35610      --------->TGA1a                               <---------ARR14(2)             --------->At4g35610      <---------TGA1a            <------NtERF2--------->AHL20(2)         <---------ARR14(2)   <-------TEIL  --------->O2  <<<<<<<<<<<<<<<<<LFY   <---------AHL20(2)   --------->ARR11(3)   ================================== ---ANAC58<---------ANAC46     --------->ARR14(2)   --------->ARR14(2)  <-----------GT1<---------O2 ---ANAC46<---------ANAC58    --------->RVE1(1)<------ZmHOX2a(2)   ==============================bZIP_DOF ---ANAC58<---------ANAC58 ---------->DOF2    <---------ARR11(3)   ---------->DOF2 --------->DEAR3(2)   gttgatacaatggcgtctcagagacatttaaaagatcttcttgaagaagatcaagaaccgtttcagcttcaaagttacatctcagaccgacgttgccaaa  947400            --------->ANAC58            --------->ANAC58          --------->MYB52(1)         ----------->HVH21                                                    <---------RAP2.6(3)       --------->bZIP60(1)                                                    --------->LBD16       --------->ANAC46                                                       ------>NtERF2       <---------ANAC55(2)                                                   --------->RAP2.3(2)       --------->ANAC55(2)         --------->DEAR3(1)                        --------->RAP2.6(2)       --------->ANAC55(1)      --------->ANAC58                             --------->ANAC58       --------->ANAC58         --------->ANAC58                             --------->ANAC58       --------->ANAC58      <---------ARR14(2)                              --------->ANAC46       --------->O2          --------->ARR14(2)                           <-----------RAV1(1)       <---------O2        --------->ANAC58                            <---------ARR14(2)       --------->TGA1a  --------->WRKY18(1)                            --------->ARR14(2)       <---------TGA1a <-----------HVH21                             <----------DOF2 ------ATHB12         --------->ANAC46    <---------CCA1(2)         <---------ANAC58 ================bZIP_DOF  --------->ANAC58                         <---------ANAC58   tcaatgctcacgtaacgcatttacaggtcaagaaacgcagacccatctctcaaaacgctggacttccctcgcgtttctgccgcaacgcttgtttcttctc  947500                     ---------->DOF2            ------>ZmHOX2a(1)            ----------->HVH21                        <---------ARR14(2)          --------->At4g35610                        --------->ARR14(2)          ----------->RAV1(2)                       ------>MYB46(1)      <---------ARR14(2)                    --------->ANAC58      ------->TEIL--------->LBD16           --------->ANAC46                                 <-------      --------->ARR14(2)     <---------ALFIN1       ------>MYB83       <----------DOF2     ----------     <---------CCA1(2)--------->DAG2        --------->TGA1a------>NtERF2    --------->TOE2(3)--------   <---------MYB52(1)=================================bZIP_DOF    --------->ANAC46     --------->LBD16  --------->LBD16--------->ANAC58           --------->ANAC58    ---------->DOF2      <---------LBD16 <---------ANAC46--------->ANAC58           ===============================bZIP_DOF --------->MYB52(1)   tctccgtgaatctcctgacccgaaaaagtctccactcttcgaactcaagtcaccaaatcggagccaaaacgcgattttcgtcaatataccggcgagaact  947600  Previous    Next  AGI:  At5g03668.1    Description:  other RNA Range:  from: 947100    to: 948966    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g03670.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15955.1) Range:  from: 947145    to: 950170    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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