Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ZAT14                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)             <--                             <----------DOF2                <------ZmHOX2a(1)             ---------->DOF2 ----->ARR11(3)          <----------DOF2      --------->ANAC46    <---------GLK1(1) <-----------GT1 ----->AHL20(1) ------>ZmHOX2a(1)           <-----------GT1 ===============HOX2a_HOX2a--------->ANAC46 ---->GT1      --------->TOE2(3)        ------->TEIL        ================HOX2a_HOX2a --------->ANAC46   atattgtatgtgataatcctaaaactgctttcttttgggatggacttcaccctacagaagaaggatggagatcggtttactctgttttacgcgaaagtct  918300                                                 <---------TOE2(3)                                                 <---------TOE1(3)               <---------ZAT14             ---------->DOF2                     <---------TOE2(2)               --------->ZAT18      <----------DOF2       ---------->DOF2      <---------TOE1(2)<---------At4g35610 --------->LBD16 <---------ANAC58             <---------ANAC58    --------->At4g35610      ------>ZmHOX2a(1) -------At5g28300<---------ANAC58             <---------ANAC58   ------->TEIL  <---------ZAT18   taccgcgtctttgattaaagcgtgagaaacaaaagaaacacacattttgcttaggttttttcttatgaagctcaatgtttgagcgctctgttcctgtttt  918400                                                     --------->RVE1(1)                                       <---------ANAC58                                       <---------ANAC58           <-------TEIL                        <---------ANAC58            <---------ARR11(3)            --------->ATHB12       <---------GLK1(2)--------->ARR11(3)                <-----------GT1 <-----------ARR10      <---------ANAC58         <---------AHL20(2)                 ---------->DOF2 <---------ARR11(3)     <---------ANAC46         --------->AHL20(2)             <---------ICU4 <-----   cagtatctcttcattcatttgtgtttgtgtgtttaaagattgtgtgactaataaaatctcttaactggttcatttctattactcattaaaaccctattta  918500                                        --------->ANAC58                                        ----------->GT1                  ---------->DOF2       <---------ANAC55(2)                                ----------              <-----------GT1           --------->ANAC58                               --------->ANAC58             <---------AHL20(2)         --------->ANAC55(2)     <------MYB46(1)        --------->ANAC58          <---------ICU4           --------->WOX13(1)          --------->MYB59         --------->ANAC46         --------->AHL20(2)       <---------AHL20(2)   --------->LBD16             <-----------GT1         --------->ICU4           --------->AHL20(2)   ----------->GT1         ------>ZmHOX2a(1)         <---------ATHB51        --------->AHL20(2)   ----------->GT1        ========================         <---------AHL20(2)  --------->AHL20(2)      <---------LBD16       <---------ARR11(3)       --------->YAB1        <---------AHL20(2)  <---------ATHB12          --------->ARR11(3)     --------->AHL20(2)      ----------->TBP <---------MYB52(2)<---------TOE2(3)   --------->YAB1 ----AHL20(2)--------->AHL20(2)  <---------AHL20(2) ------->TEIL<------MYB83 ------>ZmHOX2a(2) <-----   gtttcaaaaaaataattaactaaagctaaatataaataaatcaagtaactaatgaaccggaaaattaggttgaacatgatcctaataacaagccaaagga  918600                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                             --------                            <---------ANAC55(2)                                            <---------ZAT14                            --------->ANAC46                 <------------CBF             --------->ALFIN1                            --------->ANAC58              --------->ANAC55(2)           <---------ANAC46                            --------->ANAC55(2)         <---------AHL20(2)      <-----------GT1<----- >DOF2                      --------->ANAC58     <---------MYB46(3)   <----------DOF2 <---------ZAT14 =HOX2a_HOX2a            <---------SPL7          ----------->GT1  --------->ZAT18     --------->ZAT14 -ZmHOX2a(1)            <---------DAG2      --------->ARR11(3)    <---------ZAT18 --------->ZAT6  <--   ctctcagacttctaactaatacttagccttacgaaacagttagaaagatagtggttatttaagtattgtccactttgtttattaacactagagtgtagat  918700                                                          <---------MYB46(3)           --------->AtLEC2                              <---------MYB52(1)           --------->ANAC58                             <-------GAMYB           --------->ANAC58                        <---------ZAT14         ---------->DOF2                           <---------SPL7 ----ARR14(2)                                      --------->REM1(2) --->ARR14(2)                                      <---------ARR14(2)                        -------- --->ARR11(3)                                      --------->ARR14(2)         <---------ANAC58 ----ARR11(3)     --------->TOE2(3)              <---------------AtSPL3       --------------------->WRI1 --->ARR10 --------->ANAC46                     <---------ANAC58              <---------ANAC58 ----GLK1(2)    <---------ARR14(2)              <---------ANAC46           <-----------GT1   <-------GAMYB ---------GT1  <---------CCA1(2)                <---------ANAC58   <XXXXXXXXXXXXXXXXXXXXMIR415     <-   tttcttctcagacaagcaaatctcaaaatccaaaatatggtttcgaatcagcgtgtacggttgtttatgctctgtttttgccttgttaacaacgcggtta  918800           --------->At4g35610          --------->TOE2(2)      --------->ANAC58                  --------->TOE1(2)      --------->ANAC46                 <---------ANAC55(2)                            ------->TEIL      --------->ANAC58                 --------->ANAC55(2)                           <---------GLK1(2)     <---------LBD16                  <---------TOE2(3)                            ------->GAMYB <---   --------->MYB46(3)                --------->MYB52(1)                          <---------At4g35610 --------->ANAC46              ----------->GT1                                   --------->At4g35610 ->At5g28300                  --------->DAG2          <---------ZAT6    <---------At4g35610      <--- --------At4g35610          ---------->DOF2  ----------->GT1            --------->At4g35610     <----   tagcagccacggaagatgaaaacgtcgagagaaaggtaataacgtaagagtgaatagtgtttttgtgttttgtctggtgagacaactgaatctctcaccc  918900                                                 --------->ZAT18        <---------At4g35610                                               --------->ANAC58         --------->At4g35610                                               --------->ANAC58     <---------REM1(1)   ------>ZmHOX2a(1)                 <---------REM1(2)    <---------GLK1(1)                <---------ARR11(3) ------DAG2         <---------At5g28300--------->TOE1(2)  --------->ARR14(2)           --------->YAB1 -------DOF2       <-----------GT1 <---------ZAT18        <---------ARR14(2)          <---------YAB1 -----DAG2   <----------DOF2      <---------ANAC46        --------->GLK1(1)--------->At4g35610      -   ttttcctctgtttctctttatttacagccttacattgtgtacatgggagaggccactgagaattctcttgttgaagctgcagaaaaccatcataatcttc  919000                                                    <---------ARR14(2)                                            <-----------TGA1                                            <-----------HVH21             <----------DOF2                                           --------->YAB1          <---------AHL20(2)                                         >>>>>>>>>>GATA-1         <---------AHL20(2)                             <---------ANAC58       --------->ARR14(2)    <---------DAG2                             <---------ANAC58       <---------GLK1(2)  <-----------GT1               ----------->GT1           <-----------GT1          --------->ICU4           --------->ANAC58          ------>ZmHOX2a(2)--------->ARR11(3)   <---------At4g35610--------->AHL20(2)      --------->ANAC58 ---------->HVH21     --------->GLK1(2)<---------YAB1   <---------YAB1 <---------AHL20(2)---------->DOF2   taatgacagtgatcggagagtaagaatcagttcttgctcatattatcgtcatcggatttttattcgaaattatttacttttgcagcgagagcaaagcaag  919100                                                                                   --------->ANAC58                                                                                 >>>>>>>>>NAP                                                                               <---------ANAC55(2)                                                                               --------->ANAC55(1)                                                                               --------->ANAC55(2)                                                                       --------->GLK1(2)                                                                       --------->ANAC58                                                             ---------->DOF2   --------->ANAC46                                                         ------>ZmHOX2a(1) <-----------HVH21       <---------ARR11(3)                               --------------->AGL15  --------->ANAC58       --------->ARR11(3)                     --------->ANAC58         --------->ANAC58       --------->GLK1(2)             <---------GLK1(1)  <---------------AGL15  --------->ANAC58<-----  ----------->GT1            <---------YAB1   --------->ANAC58  <---------At4g35610--------->ANAC58   agaactgaaaatctatagctatgggaagaatatcaatggatttgtggcaagactgtttcctcatgaagcagagaagctatcacgtaagtaacaaaactgt  919200  Previous    Next  AGI:  At5g03610.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G09930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15945.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 915464    to: 918484    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g03620.1    Description:  subtilase family protein. similar to XSP1 (XYLEM SERINE PEPTIDASE 1), subtilase [Arabidopsis thaliana] (TAIR:AT4G00230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15943.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Peptidase S8, subtilisin-related (InterPro:IPR015500) Range:  from: 918737    to: 921873    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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