Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->AtLEC2                                                --------->YAB1                                               <---------ATHB12                                               --------->MYB46(3)                --------->ANAC46         <---------ARR14(2)            ------>MYB83                 --------->ARR14(2)                   <---------MYB46(3)       --------->ANAC58  <------ZmHOX2a(2)    ------>MYB83                    <---------DEAR3(2)       --------->ANAC58 <---------ARR14(2)    -------->P          <---------ANAC58             <-----  --------->MYB59       --------->ARR14(2)    ------>MYB46(1)     <---------ANAC46             <----- ----->GT1  ------>MYB46(1)             --------->GLK1(1)         <---------ANAC58       <-----------HVH21   taagtaggcacaccaactacgagaccgatccataaacttgacatatccaaccatgaaaacgttctctggcttggagttgtcggtttcaagtcgtcattcg  899800                                                                              ----------->HVH21                                                                            <---------At4g35610                                                                            --------->At4g35610                                                                            <-------GAMYB                                                                    <---------ANAC46    --------->RAP2.6(3)                                                                    <---------ANAC58    <------ZmHOX2a(2)                                                                    <---------O2 <---------bZIP60(1)                                                                    <---------TGA1a     =============                                                       <---------WRKY38(1)  <------NtERF2============                               --------->LBD16         <---------WRKY12<---------DEAR3(1)------>ZmHOX2a(2)     <---------MYB46(3)  <---------SPL7--------->AHL20(2)           ================MYC_MYB--------->At4g35610    --------->ALFIN1    --------->TOE2(1)             --------->WRKY18(1)  <---------MYB46(3) ----ANAC58             --------->TOE1(1)            <-----------HVH21--------->ALFIN1 <---------ARR14(2) ----ANAC58           <-----------HVH21<---------AHL20(2)           <---------ANAC58   --------->ARR14(2)   tgagggatgggtcgaattgggactcgtcgtacccgtggtcattaatttctgagccggtcatcgctgagagtcgtgggcggatgacaccagatcggctcaa  899900                              --------->At4g35610                     ------>ZmHOX2a(2)                   --------->ARR14(2)                   <---------ARR14(2)                               <-------GAMYB                  <------ZmHOX2a(1)                                <---------ANAC46               ---        <-----------GT1       <---------At4g35610                  <---------ANAC58      --------->ANAC46      <-----------HVH21       <---------ZAT2   --------->YAB1 <----------DOF2            --------->ANAC58 ========================HOX2a_HOX2a<---------ANAC58          <---------DAG2  <---------SPL7      <-- ========================HOX2a_HOX2a<---------ANAC58<---------ZAT6 <---------ANAC58      --------->ANAC58   aaccaagttgtcaccaggcaggatcggactgaagctgtgcttgcccaattcatagtgtttgctacttttgcgttgaatgtcgaacgtagacacacaagaa  900000                                                                            ---------->DOF2                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                <---------ARR11(3)               <---------ANAC58                                 --------->ARR14(2)          <-----------RAV1(1)                                   --------->AGP1     --------->GLK1(1)                                          <---------ARR14(2)     <---------GLK1(1)                                          --------->ARR11(3)                 <-   <------ZmHOX2a(1)------->TEIL                                <---------ARR14(3)           <------- ------>ALFIN1 <---------ANAC46                                 --------->ARR14(3)     <---------YAB1 -------REM1(1)<---------ANAC58        <---------YAB1<----------DOF2 ---------->DOF2----------->TGA1   gtgtaggaactcttgtggcttgaatctgtgaatgagacatgttgatagagtttagcttttgtgcgagatcttaaagaagaaagagaatgacgattgtgtt  900100                                 --------->ANAC58                                    ---------->DOF2 --------ANAC46                  --------->ANAC58         <----------DOF2      ---------->DOF2   ---- --YAB1                   <---------TOE2(3)               *TSS         ---------->DOF2    <----------   tgtggggatggagattgagatggagactaaggcttaagcaattggagaccattgagtcttctttctcacacagaaaagagagaaagagaaagaattgtga  900200             --------->ALFIN1             <---------AtMYB61                    <------MYB83           <---------ANAC46                       <------MYB46(1)          --------->ALFIN1                    <---------MYB46(3)          <---------AtMYB61                  --------->ALFIN1                            --------->YAB1        <-----------RAV1(1)                 <-------MYC3                        <---------ANAC58        <---------ANAC58                    ------->MYC3             <---------ANAC46  <-----------HVH21        <---------ANAC46            --------->ANAC46               <---------ZAT14---------->ID1    <------------CBF            <---------HSFB2a(2)            ------->MYC3     <---------ANAC58 ----->At4g35610             --------->ARR11(3) <--------P------->TEIL      <---------HSFC1(2) --CBF  <---------ANAC58     <---------ARR11(3)<-------GAMYB   <-------MYC3 --------->HSFC1(2)   gatggaaattgtgtggtggtgttctgtttaagttctctaagaaacatgtggttggacatgaaccatgtgtttagtggatgtttcgtcgctatcacatctc  900300                ----------->GT1                --------->LBD16               --------->ANAC58               --------->ANAC55(1)               --------->ANAC58               --------->ANAC46                  --------------->AGL15               <---------ANAC55(2)   <-------TEIL<---------------AGL15               --------->ANAC55(2)  --------->CCA1(2)              <---------LBD16       --------->ARR14(1)         <---------------AGL15     <---------GLK1(2)         --------------->AGL15     --------->ARR14(2)        <-----------------AG       --------->ARR11(1)        =========================================================MADS_MADS                  <--------        ----------------->AG       <---------ARR14(2)    --------->At4g35610                <--------        --------->ANAC55(2)--------->AHL20(2)    <----------DOF2                        --------->YAB1        <-----------------AGL1   ----------->ARR10       <---------At4g35610    <----------DOF2   <----------DOF2      --------->TOE2(3)    <----------DOF2  ---------->DOF2<-----------GT1---------   attttcttttacttaatacggaaaaaacttaaaataagattcgatttctttcttttttcagcaaaaaagagtttttttttttcttttcaatcttacttga  900400                                                                                             <-------  --------->WRKY38(1)                                                                      <---------YAB1  --------->WRKY45                                                                        <---------ARR11(3)  --------->WRKY12                                                                        --------->ARR11(3) <---------MYB52(1)                         ---------->DOF2                           --------->YAB1 --------->DOF5.7(2)                       <---------AHL20(2)                         <--------HAHB4 -ANAC58                                   --------->AHL20(2)             <----------DOF2--------->YAB1 -ANAC58        <---------ZAT18  --------->ICU4              ------>ZmHOX2a(2)       --------->ICU4 >ANAC55(2)<---------MYB52(1)    <---------ATHB51 ----------->GT1---------->DOF2     <---------YAB1   ttcgttgacttccattagcctactcatttagagaaattattcaaattaaagaacgtgatttgatccctaaagacttctttcttagctataattatctttc  900500                                                                            ----------->RAV1(1)                  ----------->RAV1(1)                                     --------->MYB46(3)               --------->CCA1(2)                               --------->ARR11(3)     --------->ARR14(2)   --------->ANAC46                    <---------CCA1(2)      ----------->RAV1(1)     <---------ARR14(2)<-------TEIL                     <----------DOF2  --------->ANAC58         --- ---DOF2   <---------WOX13(1)                     <---------YAB1         --------->ANAC58         <--   aagagagtatttgatggatacaacatacatgaaacaactcaaacacttgtttcttattctttttatatctagcctaagcaccaatagccacattgactcg  900600                                                          --------->At4g35610                                                        <---------ANAC58                                                  <----------DOF2              --------->ANAC46                                                 <---------DAG2              ---------->DOF2                                               -------->P <---------At4g35610========================            --------->CCA1(2)                  ------>MYB83               <----------DOF2          <-           <---------ARR11(3)                  ------>MYB46(1)         <---------YAB1       =========           --------->ARR11(3)                <---------MYB59      ----------->GT1           <--------    <---------YAB1                           --------->AtMYB61   <---------ARR11(3)   --------->WOX13(1) ------>ARR14(2)                            --------->MYB46(3)   --------->ARR11(3) <------ZmHOX2a(2) -------ARR14(2)                       <---------ZAT6   <---------ANAC58  ===========================   tatactatcaatagatatactacaaacacaagaacatagtagtgtgaccaaccttttggcttctgaagatgttattctttcaagcgatcaatctctttct  900700  Previous    Next  AGI:  At5g03555.1    Description:  permease, cytosine/purines, uracil, thiamine, allantoin family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO62981.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65774.1); contains InterPro domain Permease for cytosine/purines, uracil, thiamine, allantoin; (InterPro:IPR001248) Range:  from: 898240    to: 900158    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g03560.1    Description:  nucleobase:cation symporter. similar to unnamed protein product [Vitis vinifera] (GB:CAO62967.1); similar to Os08g0560600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062509.1); contains domain PTHR10483:SF5 (PTHR10483:SF5); contains domain PTHR10483 (PTHR10483) Range:  from: 900459    to: 902761    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version