Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->MYB46(3)                                                                              --------->AtMYB61                                                                              <---------ALFIN1                                                                            ----------->RAV1(1)                                                                           --------->AtMYB61                                                                           --------->DEAR3(1)                                                                           <---------ALFIN1                                                                          --------->MYB46(3)                                                                         <---------ATERF1(1)                                                                        <---------ALFIN1                                                                        --------->DEAR3(1)                                                                       --------->ERF1                                                                       --------->ATERF1(1)                                                                       <------NtERF2                                                                      <---------RAP2.6(3)                                                                      ------>NtERF2                                                                     >>>>>>>>>AtERF-3                                                                     --------->ANAC46                                                                     --------->RAP2.3(3)                                                                     >>>>>>>>>AtERF-5                                                                     >>>>>>>>>AtERF-1                                                                     >>>>>>>>>AtERF-4                                                                     >>>>>>>>>AtERF-2                                                                     --------->RAP2.3(2)                                                                     --------->RAP2.6(2)                                                                    --------->MYB46(3)                                                                    --------->ATERF1(1)                                                                    --------->ERF1  ------->GAMYB                                                                    --------->RAP2.3(1)                                                         --------->O2<---------ATERF1(2)          --------->AtMYB61    --------->ZAT6            <---------O2--------->DEAR3(1)      ----------->HVH21     --------->YAB1               <---------ANAC46------>NtERF2 ----------GT1              --------->bZIP60(1)      <-----------HVH21<---------ATERF1(1) ->MYB46(1)           --------->GLK1(2)              <-----------TGA1--------->ATERF1(2) ->MYB83  --------->ZAT6  <-----------HVH21--------->GLK1(2)       --------->At4g35610         ------ ---MYB59--------->MYB46(3) <---------bZIP60(1)<-----------HVH21   <---------ATERF1(1)        -------   ataactctgcgaccactagaaactaatctgtcatcactagaaactaatctgtcatcgtcacgttgaagtagccgccaccaccacaaccgtgttattccta  877900                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                   --------->ZAT6               ---------->DOF2               -------                                 --------->MYB52(1)         <------ZmHOX2a(1)                 <------                      <-----------HVH21                    ----------->GT1                    <------  --------->MYB46(3)  --------->TOE2(3)                    <----------ID1                     <------ >ZmHOX2a(1)         ----------->GT1                  --------->YAB1   ----------->GT1      <-------- -->TOE2(3)   ----------------->AGL1                 <-------TEIL   ---------->DOF2   <<<<<<<<<<<<<<<   aatcaccaccaatttgtccaaaatcgtcaaatgcttaacagtagatttcaattgattcatgaggaaaaaagaaaggtcaatacaaaaaatccagtggcca  878000                                       <-----------ARR10                                       --------->ARR14(2)                              <------NtERF2                             ------>NtERF2                            <---------ETT(2)                            ----------->HVH21                            <----------ARF1                            <----------ID1                           <------NtERF2       <------MYB46(1)     --------->ATERF1(1)     <--------P           <---------ATERF1(1) --------->AGL15       <------MYB46(1) <---------ARR14(2) ----->RAV1(1)         <---------MYB46(3) ---------->AGL3       <------MYB83--------->YAB1                              --------->YAB1 ---------->AGL2      <---------MYB46(3)                                --------->ANAC46 ---------->AGL1      --------->ALFIN1<---------GLK1(2)                 <---------LBD16 -----------AG        --------->MYB111(1)                              <---------LBD16 -----------AGL3      --------->MYB55(2)                            <-----------HVH21      ---------- -----------AGL2      --------->MYB111(2)                  --------->AHL20(2)--------->ANAC58       - -ZAT18<------MYB83   <---------AtMYB61--------->GLK1(2)--------->AHL20(2)   --------->ANAC58-------- <<LFY--------->MYB111(1)<---------DEAR3(1)       ----------->GT1  <----------DOF2 ---------->DOF2---   caaatgggtagggagacgaatgagttggtggcgacaaggagaatctgagggagagaaataaaaaaatccctttcacgggaagcataaaagacagagtgaa  878100                                                          <------NtERF2                                                  --------->ANAC58                                             <---------ARR14(2)                             --------->CCA1(2)   <---------LBD16                    --------->ANAC58         --------->ARR14(2)                    --------->ANAC58     <------NtERF2--------->ZAT2                   <-------TEIL         --------->LBD16<---------LBD16                  --------->ARR14(1)   <---------DEAR3(1)--------->LBD16                  --------->CCA1(2)    <---------ANAC46--------->ATERF1(1)       --------->ANAC58                 <---------GLK1(2)    <---------LBD16 --------->At4g35610        --------->ANAC58                 <---------ARR14(2)   <------NtERF2   <---------ZAT2 ------>ZmHOX2a(2)    <XXXXXXXXXXXXXXXXXXXXMIR841B*    ----------------------->TaNAC69(2)       <---------ARR14(2) ->GT1           --------->ARR11(1) ---------->CDC5  --------->DEAR3(1)       --------->ARR14(2) -------->YAB1   --------->ARR14(2) <---------DEAR3(1)------>NtERF2 <------ZmHOX2a(2)          ------ --->GT1       ----------->ARR10  <---------ANAC58--------->ANAC46 <---------ARR14(2)          ------ ------>AHL20(2)<---------GLK1(1) <---------ANAC58--------->ANAC58 --------->ARR14(2)        --------   aataatagaactcactggagattcgccagagagatggctcggcggagaattcacgcagccggagaagacgatcggaagaagacacgctcaccagagaaag  878200                                                                                <---------YAB1                                                                 <---------ARR14(2)                                                 <---------ANAC58--------->ARR14(2) --->ANAC58         <----------DOF2--------->AHL20(2)           <---------CCA1(2)              ------ --->ANAC58     ------>ZmHOX2a(1)  <---------AHL20(2) <----------DOF2   ------>ZmHOX2a(1)------------ -->DOF2    <-----------GT1      <----------DOF2 <---------ANAC58<---------ARR11(3)    ------>ZmHOX2a(1)   caaatcgagatttgtttcctctcttttagttgggcctttaatttagttcaggcctgctttaagcccatatattcctaatcttcttattcctcgtgaagct  878300                                                          ------>MYB46(1)                                                          ------>MYB83                                                         <---------ALFIN1                               <---------------AGL15    <---------MYB55(2)                               <----------DOF2          <---------MYB111(1)                          --------->GLK1(1)             --------->MYB46(3)          --------->HSFB2a(2)  --------------->AGL15    --------->DEAR3(1)          <---------HSFC1(1)  ----------------->AGL1    <---------MYB111(2)          --------->HSFC1(1)  <-----------------AGL2    <---------MYB46(2)          <---------HSFB2a(2) <-----------------AGL3   --------->ANAC46     ------->TEIL <---------MYB52(1)<---------LBD16    --------->ANAC58  --------->ANAC55(2)     <---------GLK1(1)            --------->ANAC58            <---------AHL20(2)  <---------ANAC55(2)    <---------ARR14(2)          <---------ALFIN1 <---------GLK1(1) --->TOE1(3)    <---------MYB46(3) *TSS   ----------->ARR10           --------->GLK1(1) ----------->TaNAC69(2)  --------->ARR14(2)  --------->GLK1(2)    --------->YAB1  --------->AHL20(2)   taaaacgtatttctagagccgttgagggatttgctatatgggggaagactctgttccacccacctatatcagaattcagaaccattttatatgcttcaaa  878400                                  <------------CBF                               ------------>CBF                         --------->AtLEC2                       <------------CBF                               <---------ANAC58                     --------->ARR11(3)                               <---------ANAC58                     --------->AHL20(1)                              ------>ZmHOX2a(2)                     <---------AHL20(1)                             <---------YAB1             <-----                     <---------AHL20(2)                        --------->ANAC55(2)           --------  ---------->DOF2 --------->AHL20(2)                          <---------TOE2(3)     --------->MYB46(3)   tgacaaaagaaaaatgtttttaaaatattggaattcaattgtgcaagtttcggtataatttgtttaggtgatccttgcaagttgcaacaactacttaacg  878500                                                                                                  ---                                                                       <---------YAB1          ------                                                                     --------->YAB1          <-------                                                        <---------ANAC58                   --------->AHL20(2)                                              ------->TEIL----------->HVH21               <---------AHL20(2)                                        <---------YAB1  <---------ANAC58               --------->AHL20(2)                                   <------MYB83 <xxxxxxxxxxxxxxxxsmallRNA(i)           <---------AHL20(2)                                <------ZmHOX2a(1)   --------->ATHB12 <---------ICU4   <---------AHL20(2)                    <---------TOE2(3)   --------->ICU4 <---------MYB46(3)         <---------AHL20(2) -------MYB.PH3(1)---------->DOF2  <------MYB46(1) <---------YAB1   --------->ICU4--------->AHL20(2) ->MYB52(1) ----------->GT1 <<<<<<<<<MYB98 <---------YAB1 ----------->TGA1   <---------YAB1<---------AHL20(2)   gtttttgagaagccttgtaaaaaaggttttgttaggatggtgatgatgaatgtatgatgggtgacgactaattatgtttatgattttatttatttattta  878600                                                                      --------->ANAC46                                                                      --------->ANAC58                                                                  ------>NtERF2                                                                  <------NtERF2                                                                 --------->RAP2.6(2)                                                                 ------>NtERF2                                                                <---------RAP2.6(2)                                                                <---------DEAR3(1)                <---------AtMYB61                               <---------ATERF1(2)             <---------ANAC58                    --------->MYB52(1)--------->WRKY18(1)   <---------ARR14(2) <---------ANAC46        --------->ANAC58  --------->ATERF1(2)              ----   --------->ARR14(2)<-----------------------TaNAC69(2)   <----------DOF2                        ---- ------->DOF2<---------ANAC58                 --------->ANAC58 --------->RAP2.6(3)               ---- --->YAB1<----------DOF2           <---------STY1(2)  <---------ANAC58--------->ANAC58   <-----------HVH21 --------AGL15  <---------TOE2(3)  --------->STY1(2)  <---------ANAC58--------->AtLEC2  <----------DOF2   taaagtatatgctttgcttaggttgagtagtgaagctagctagttggcaagtaatggcttcttttggcggccaagcaattctctatctctctttcacaca  878700          ------>NtERF2         --------->ANAC58                                                              <---------ARR11(3)         --------->ANAC58                                                              <---------AHL20(1)         --------->ANAC46                      --------->AHL20(2)                      --------->AHL20(1)       <---------ATERF1(1)            --------->AHL20(2)                               --------->ARR11(3)     ------>ZmHOX2a(1)               <---------WOX13(1)                               --------->YAB1 --------->ARR14(2)               ------>ZmHOX2a(1)         --------->YAB1      --------->ANAC58 ----->ANAC46                   ----------->RAV1(2)     <---------YAB1          --------->ANAC46 ----->ANAC58                  ------>ZmHOX2a(1)  <---------YAB1                --------->ANAC58 ----->ANAC58          <---------ATHB12<---------AHL20(2)  <---------YAB1    --------->ZAT14   cacaatcctcgacgccaagacttaaatcaattcctcctgatttattcattttaaaattgtgatgatactagcttcacaatacactcaaaaatattcttct  878800  Previous    Next  AGI:  At5g03500.1    Description:  transcription coactivator. similar to transcriptional co-activator-related [Arabidopsis thaliana] (TAIR:AT5G03220.1); similar to unknown [Brassica rapa] (GB:ABL97954.1); contains InterPro domain MED7; (InterPro:IPR009244) Range:  from: 876520    to: 878335    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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