Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->LBD16                                                           <---------LBD16                                                          --------->HSFB2a(2)                                                          <---------HSFB2a(2)                       <                                                          <---------LBD16                           -               --------->MYB52(2)                  <---------CCA1(2)                                -             <---------MYB52(1)                   <-----------HVH21                                 -            --------->TOE2(3)                    --------->ANAC46     --------->GLK1(1)<------NtERF2-      --------->MYB52(1)  ----------->HVH21<---------GLK1(1)          ------->TEIL    --------->LBD16 ------->RAV1(2)        <---------At4g35610--------->GLK1(1)    --------->ICU4      <---------LBD16 -   cctgagactaacaacgttacttccagcgctgatactgctccagtgaaatccccgtctcttccagggataatgaactccagcatgaagccggagaattgaa  845200            <------NtERF2 ---------ANAC55(2) -------->ANAC55(2) -------->ANAC55(1)                         --------->ARR11(3) -------->ANAC58                      --------->DAG2        ----------->RAV1(2)                    -- -------->ANAC46                     ---------->DOF2    <---------DAG2                             -- -------->ANAC58                  ----------->GT1       <----------DOF2                    --------->At5g28300   acacgtatgaaggccccttgtacaatttctgtaaaactgtaaagtagctcttgaaaaactttacctggttttttgacgaatagtctgtttagcggtaaat  845300                              <---------ANAC46                              --------->ETT(1)                         <---------ANAC58                         <---------ANAC58                      <---------ARR11(3)                      --------->ARR14(2)               ------->TEIL <-----------HVH21               <---------ARR14(2)               --------->ARR14(2)               <---------ARR11(1)                              <------ZmHOX2a(1)               --------->GLK1(2)                              ----------->GT1       <----------DOF2--------->ARR11(3)            <---------ICU4     <---------MYB46(3) ------>ZmHOX2a(2)         --------->ARR11(3)                     <---------ANAC46     --------->MYB55(2)<------ZmHOX2a(2)          <-----------ARR10                      <---------REM1(1)    <---------AtMYB61 <---------ARR14(2)          <---------ARR11(3)                   <---------ANAC46   <---------MYB52(1)<------ZmHOX2a(1)            --------->GLK1(2)                   <---------AtMYB61 ------->MYB52(1)--------->TOE1(2)               <---------GLK1(2)                  <-----------RAV1(1) ----->TEIL   <---------ARR14(1)               <---------TOE2(3)             <----------DOF2        -   gtaccggtggtttatcgaatctaggatccttgtcgggtttagcgattttaagaatctttgccataggaaaaaaaaaacactttgctctgtggtgtagaaa  845400                                                       <---------ARR14(2)                                                   <---------LBD16        <-----------GT1                    <---------LBD16      ------------>CBF       --------->ZAT14        <<<<<<<<<GT-1                  <---------MYB52(1)    ------->TEIL       --------->ANAC55(2)   <---------AHL20(2)             <---------ARR14(2)   --------->ARR14(2)       --------->ANAC58   --------->AHL20(1)             --------->ARR14(2) --------->LBD16            <---------ANAC55(2)   --------->AHL20(2)           <------MYB46(1) <---------GLK1(1)               --------->ANAC46  --------->AHL20(2)            <------MYB83    --------->GLK1(1)               --------->ANAC58 ------>TEIL                   --------->MYB59 --------->ARR14(2)             <-----------GT1     <--   tgaattttattaaccatttggattagtccatgttcggttctgttattcggaaacccggttatggacttcaattttggaaattacgaaactgaactaatcg  845500                                   <-----------GT1                                <---------ICU4                               --------->AHL20(1)                               <---------AHL20(2)                               --------->AHL20(2)                               <---------AHL20(1)                            --------->AHL20(2)       --------->TOE2(3)                        --------->LBD16             --------->ATHB12                        ----------->GT1            <---------YAB1                            --------                      <---------LBD16            <---------CCA1(2)                           --------                    --------->ARR14(2)         --------->YAB1                                --------   --------->LBD16  <---------ARR14(2)        <---------ATHB12              --------->ANAC55(2)    <- <---------LBD16   --------->GLK1(1)        --------->WOX13(1)            <---------ANAC46  --------- -------GLK1(1)    <---------GLK1(1)      ------------>CBF        <---------AGP1   --------->MYB59 <-   atttccggttttgttgaaccgaaatccggttaaaatattaccatatcaatcatatcattagaaatgtagttctgtttcatgtaattcggtctgaatgtta  845600                               <---------RAP2.6(2)                              <---------LBD16                           <---------HSFB2a(1) ->YAB1                   <---------------AtSPL3           <----------DOF2 --->GT1                 ---------->DOF2              <---------ARR14(2) ->TOE2(3)         <---------ANAC58       <------NtERF2--------->GLK1(1) --------AHL20(2)  <---------ANAC58      ------>NtERF2--------->ARR14(2)           ----------------->AGL1 -->GT1           --------->ZAT2 ------>NtERF2       <---------At4g35610     <---------MYB52(1) ----- --------ICU4     <---------ZAT2--------->LBD16      --------->At4g35610------>ZmHOX2a(1)<---------LBD16   ataaatgctgggaacatcggagcttgagaaagtccggccatggcgacgatttctcagatacctttctctatctccttcccttgtttcgaatttcggaaac  845700                                                                                       ------>MYB83                                                                                       ------>MYB46(1)                                                                                     <---------MYB46(2)                                                                                     <---------MYB55(2)                                                                                     <---------MYB111(1)                                 <---------ANAC58                                    --------->MYB46(3)                                 <---------ANAC46                                    --------->AtMYB61                                 <---------ANAC58                                    <---------MYB111(2)                        <----------DOF2                                      --------->HSFB2a(1)             --------->At4g35610--------------->AtSPL8                      <---------TOE1(2)           --------->YAB1       --------------->AtSPL3                      <---------TOE2(2)      <-          <---------YAB1<---------DAG2                  --------->YAB1   <---------ANAC46<---------MYB52(2) ---->MYB46(3)    --------->TOE2(3)             --------->ANAC46 <-----------GT1    --------->ANAC46   catcgttctactatcatcagcctcaactttttgtttcgtacttgaattccacgaagaagcatagttttatctgtttcgcatgttccaccaaacaaaccag  845800                                                                            <---------ICU4                                                                            --------->YAB1                                                                            -------->ATHB1                                                                            <--------ATHB1                                                                            --------->ATHB51                                                                            --------->ATHB12                                                                           <---------YAB1                   <XXXXXXXXXXXXXXXXXXXXXMIR855                            --------->ICU4               <---------MYB52(1)                                   ------->TEIL    <---------HSFB2a(1)                      ----------->GT1    --------------->AtSPL3   --------->MYB52(2)    --------->HSFB2a(1)                    <---------LBD16  <---------ZAT2 <---------ATHB12       ---    <---------HSFC1(2)                   ------>ZmHOX2a(2)  --------->At4g35610          --------->ATHB12    --------->HSFC1(2)            <---------ANAC58          --------->ZAT2 <---------ATHB51<---------WOX13(1) ------TEIL ---------->ID1        <---------ANAC58          <---------At4g35610      ----------->GT1<   gttcgaaatttctcgtcgtttttttttttggtttttgcttcgatctgtggaaaattggagacagcagacgtacttcaattattgttttggttaattggtc  845900                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                    <---------LBD16            ======================                                                 --------->HSFB2a(1)           <----------DOF2                                                 --------->HSFC1(2)           <---------ANAC58                                                 <---------HSFB2a(1)          <---------ANAC46                                                 <---------HSFC1(2)           <---------ANAC58                                                <-----------ARR10          <---------MYB52(1)                                               <------ZmHOX2a(1)           ---------->ID1                                            --------->YAB1                ===========================                                           --------->ICU4                 <-------GAMYB                                           <---------ATHB12              --------->MYB52(2) ------>At4g35610                 --------->ZAT14--------->At4g35610     <---------MYB46(3)        <- ----------DOF2                   <---------ZAT14--------->ZAT2        <---------MYB52(1)     ------>ZmHOX2a(1)   tgcttgaattgaatttgaacagagttcgtaagagagtgaagagcaatgaggagcttcggagtgagattatgcagttcgttgctttggctgggcttcctga  846000         <---------RAP2.6(3)         --------->ORA47(1)         ------>NtERF2        <---------ANAC46        <---------ANAC58        --------->DEAR3(1)        <---------ANAC58    ------->MYC4    <-------MYC4    <-------PIF5    <-------MYC3    ------->MYC3    ------->PIF5    ------->PIF4    ------->MYC2                        --------->ARR14(2)    <-------MYC2                        <---------ARR14(2)    <-------PIF4                      <------MYB46(1)   <---------O2                       <------MYB83   --------->O2                       --------->HSFC1(2)   <---------ANAC58                   <---------HSFC1(2)   <---------ANAC58             <-------MYC3   <---------ANAC46             ------->MYC2   <---------bZIP60(2)          <-------MYC2                                       --------->HSFB2a(2)   <---------TGA1a              ------->MYC3                                       <---------HSFB2a(2)   --------->TGA1a           <---------ALFIN1                           ----------->GT1   <---------ANAC55(2)      --------->LBD16                         <---------ARR11(3)   --------->ANAC55(2)--------->HSFB2a(1)                           <---------GLK1(2)  ------------>OsbHLH66   <---------LBD16                           --------->ARR11(3)             -- ============bZIP_DOF <---------HSFB2a(1)     --------->GLK1(1)     <---------ARR14(2)         <----- ============MYC_MYB --------->GLK1(1)--------->HSFB2a(1)           --------->ARR14(2)    --------->ZAT14 ----------HVH21     <---------GLK1(1)<---------HSFB2a(1)   <---------ICU4  <---------AHL20(2) ------   aggtcacgtgccgtccatgaaggaactctccgcacatggaaggttccgatttccaaattccaaaattgcagattttgttaaatttctagcagtctagtaa  846100  Previous    Next  AGI:  At5g03415.1    Description:  DPB. similar to DPA, transcription factor [Arabidopsis thaliana] (TAIR:AT5G02470.3); similar to DPA, transcription factor [Arabidopsis thaliana] (TAIR:AT5G02470.1); similar to DPA, transcription factor [Arabidopsis thaliana] (TAIR:AT5G02470.2); similar to transcription factor DP1 [Populus tremula x Populus tremuloides] (GB:AAQ13675.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Transcription factor DP (InterPro:IPR015648); contains InterPro domain Transcription factor DP, C-terminal (InterPro:IPR014889); contains InterPro domain Transcription factor DP, subgroup (InterPro:IPR0165 Range:  from: 842499    to: 845414    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g03420.1    Description:  dentin sialophosphoprotein-related. similar to 5'-AMP-activated protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G27070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63026.1); contains domain 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT (PTHR10343); contains domain gb def: AT5g39790/MKM21_80 (PTHR10343:SF2) Range:  from: 845640    to: 848913    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version