Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------>MYB46(1)                                                                                        ------>MYB83                                                                                        --------->MYB52(1)                                                                                      --------->AtMYB61                                                                                      <---------MYB59                                                                             <------ZmHOX2a(1)                               <------ZmHOX2a(2)                           --------->ANAC58                              <---------ARR14(2)                           --------->ANAC46                              --------->ARR14(2)                           --------->ANAC58                   --------->ANAC58                                    <---------bZIP60(1)                   --------->ANAC58                                    --------->bZIP60(1) --------->TOE1(3) ----GT1        --------->WRKY18(1)                            --------->YAB1<----------ID1--------->TOE2(3)   acatgctcgtgatatacagtcaagacacagacgatccaaaccaagtctaaactcaaaacaccctaacatagtgacataaggaacaaaacctaaccttgat  812800                                                                        --------->TOE2(3)                   --------->GLK1(2)                        ------->GAMYB                           <                  --------->DAG2                         ----------->RAV1(1)                      <--                 ---------->DOF2            <------ZmHOX2a(1)          ----------->GT1            <--            <---------LBD16      <---------AtLEC2        --------->MYB52(1)       <-------TEIL    <--   gagaattgtatcgcctcggaaaagctggagtttttccatggtagtaggatggagagagacaacagagttgtcatcgttaatagcttcatcgacaacaagt  812900                                                                                 --------->YAB1                                                                     <---------LBD16            <----                                     <---------GLK1(1) ------>ZmHOX2a(1)  <----------ID1        ----- ---------MYB52(1)     <---------GLK1(2)             ----------->RAV1(2)<------ZmHOX2a(1)   <-------- -------DEAR3(2)    --------->HSFB2a(2)              <---------LBD16 <-----------RAV1(2)   <--------- ----MYB83          <---------HSFB2a(2)   ------>ZmHOX2a(1)       --------->ANAC46       --------->At4g35610 ----MYB46(1)   ------>ZmHOX2a(1)    --------->GLK1(1) --------->LBD16--------->LBD16    <---------At4g35610   cggtttggagacttcttcctctctagaatcgcagtactgaaatccttcttagttttcctgaaacaaataccccaggaagacaaacaaaatcagctttcag  813000                                                                                                   <-                                                                                                -----                                                                                        =============                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                       ==============                                                                                      <---------AGP1   <------ZmHOX2a(2)                                            --------->ATHB12      <-----------ARR10 -----At4g35610                           --------->ANAC58     <---------YAB1         --------->AGP1 ---->At4g35610        --------->TOE2(3)  ----------->GT1  <---------DAG2             --------->ARR11(3) ---HVH21           --------->ARR14(2)    --------->ANAC58 <----------DOF2        ---------->DOF2  <- -DOF2        <-----------GT1  ----------->GT1  --------->AHL20(2) ------>ZmHOX2a(2)  <---------ARR11(3)   atgagatcaaactaaaaaaccctattctcaatatcgaaaaacccaagtaaaaaaatcgaaactttatgatcggaaaacaaaaatcaaagatctaagtact  813100                  <-------TEIL                 <---------MYB52(1)          --------->ARR14(2)          <---------ARR14(2)         <---------HSFB2a(1)         --------->HSFB2a(1)    <---------ICU4         <------ZmHOX2a(1)      --------->ATHB12       <---------TOE2(2)        --------->YAB1                                                     <-       <---------TOE1(2)        -------->HAHB4                                                     <-      <------NtERF2    ----------->HVH21                                                          <--  <-----------HVH21--------->MYB52(2)                                                          ------ --------ANAC58 <---------MYB52(1)                                                           <------ZmHOX2a(2) ---->TOE1(2)<---------LBD16   --------->ICU4                                        <---------HSFC1(1) ===============HOX2a_HOX2a  <---------ICU4                                          --------->HSFC1(1) ===============HOX2a_HOX2a --------->ICU4            --------->ZAT18                <---------HSFB2a(2) --------ANAC58--------->LBD16 <---------YAB1         --------->At4g35610            --------->HSFB2a(2)   tacgagtcggaggattccggttcgtttgacataatgatagcttaaactgacaagagagctctaagaaggaagttgggaaatttgtttctagagagatcga  813200                <---------YAB1             <---------YAB1          --------->ICU4          <---------YAB1        --------->YAB1       --------->ICU4       <---------YAB1        ------>ZmHOX2a(2)     --------->YAB1         <------ZmHOX2a(2)     <XXXXXXXXXXXXXXXXXXXXMIR414      --------->ZAT2    --------->ICU4         *TSS       <---------At4g35610    <---------YAB1 <---------YAB1     <---------ZAT2    <-----------GT1 -----MYB46(1)--------->YAB1--------->GLK1(1)       <-----------TBP -----MYB83  --------->ICU4--------->ARR11(3) <---------LBD16       --------->GLK1(1)            ---- -------MYB46(3)--------->ICU4        --------->At4g35610 --------->ANAC46                       ---- --->ATHB12--------->YAB1  <---------ARR11(3)<---------LBD16        <---------GLK1(1)       ---------   ttggtgatgatgatgatgatgatgaatgggatctcaagggagctgaactcgggattttatacgctctgtgatttccttcttgttggaaaaataagcgacc  813300                                                                                               <-----                                                                                              -------                                                                                             <-------                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(2)                                                                                          <---------YAB1                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                  <---------AHL20(2)                                           <---------YAB1                         --------->AHL20(2)        <---------TOE2(3)                ----------->GT1                         --------->AHL20(2)   <----------DOF2         --------->HSFB2a(2)                       --------->YAB1  <---------AHL20(2) ----->TOE1(3)             <---------HSFB2a(2)                  --------->TOE2(3)<---------AHL20(1) ----->TOE2(3)      ---------->DOF2      <---------ANAC46       --------->TOE1(3)<---------AHL20(2) -->HVH21    --------->ARR11(3)       --------->ALFIN1--------->ANAC46        --------->WOX13(1)  <--   cttaacttttaagtttatcttgaaaagttccaaaaactaggtgttgtgataaatacacccatgttcccttaacatcatatcaattaatttatattattat  813400                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                         <---------SPL7                                                                                       <-------------                                                                                    <---------ANAC58                                                                                    <---------ANAC58                       <---------ARR11(3)                                           <---------ANAC46                       --------->ARR11(3)                                        --------->ALFIN1           --------->GLK1(2)  <---------------AGL15  <---------TOE2(3)         <-----------RAV1(1) ----AHL20(2)          <-----------ARR10      <---------AHL20(1)         <---------YAB1<------------- -->AHL20(2)           --------->GLK1(2)      --------->AHL20(2)        <---------AHL20(2) --------->SPL7 --YAB1--------->HSFB2a(2) -------->P         <---------AHL20(2)        --------->AHL20(2) <-------TEIL -------YAB1 --------->YAB1------->TEIL   --------->AHL20(2)   <-----------GT1 --------->ALFIN1   atgatttatcgagaatcaaaacaaaaatctacctatatgaagaattaaaaaatttgatgtaattttaaacttattttaatagtgtggcgagggtacgtaa  813500     --------->AHL20(2)    <---------YAB1                                                                         ---------- -ANAC46                                                                <---------------AGL15 >ANAC58                                                                ============================= -ANAC55(2)                                                             --------------->AGL15 >ANAC58                                                         <-----------GT1         --------->ANAC46 >ANAC55(2)                ----------->GT1            <------ZmHOX2a(1)<-----------------AGL2 --AtSPL8             ---------->DOF2    ---------->DOF2 --------->MYB52(1)              --------->ANAC58 --AtSPL3        <---------LBD16   ---------->DOF2--------->ALFIN1  <----------DOF2      --------->ANAC58   atgtttattaaaaacgttatgggggaaagttgaaaataaaagtaaaagagaggtgaggataacagttttactttctggttttagcaaacacaagaaagga  813600                                                                       <---------AHL20(1)                                                                       <---------ARR11(3)               --------->At4g35610                                     --------->ARR11(3)              --------->MYB52(1)                                       <-----------ARR10          <---------TOE2(2)                                            --------->AHL20(1)          <---------TOE2(3)                                           --------->RVE1(1)          <---------TOE1(2)       --------->REM1(1)                <---------AHL20(2)          --------->MYB59    --------->ANAC58          <---------YAB1 --------->CCA1(1)   --------->HSFB2a(1)       --------->ANAC58        <---------------AGL15   --------->HSFC1(2)    --------->ANAC58            --------------->AGL15 <-----------GT1   <---------HSFB2a(1)   --------->ANAC58       <----------DOF2   <---------AHL20(2)   <---------HSFC1(2)  ---------->DOF2          <---------DAG2    --------->AHL20(1) >DOF2<-------TEIL<---------SPL7 <-------TEIL<-----------GT1      --------->AHL20(2) ====================================================================MADS_MADS           <----------DOF2   atagaaggttcttaggtagcggtaccaaagcaagctacatgtttttcttacttttttataaatagaaatttaatatcttaccatttgatttctttgttct  813700  Previous    Next  AGI:  At5g03340.1    Description:  (Cell division control protein 48 homolog E); ATPase. Identical to Cell division control protein 48 homolog E (CDC48E) [Arabidopsis Thaliana] (GB:Q9LZF6); similar to cell division cycle protein 48, putative / CDC48, putative [Arabidopsis thaliana] (TAIR:AT3G53230.1); similar to CDC48 (CELL DIVISION CYCLE 48), ATPase [Arabidopsis thaliana] (TAIR:AT3G09840.1); similar to putative spindle disassembly related protein CDC48 [Nicotiana tabacum] (GB:ABF59516.1); similar to Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) (GB:P54774); similar to unnamed protein product [Vitis vinifera] (GB:CAO18187.1); contains Inter Range:  from: 809947    to: 813227    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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